; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032274 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032274
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:35776041..35777567
RNA-Seq ExpressionSpg032274
SyntenySpg032274
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]7.3e-1935.14Show/hide
Query:  WELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAI----NAQGTV-VAVKIEKRMFQSAY----------------------------LK
        W+ F     SVNA VV+EFYANI K +   + VRG ++ ++PSAI    + Q  V    K E+    + Y                            L+
Subjt:  WELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAI----NAQGTV-VAVKIEKRMFQSAY----------------------------LK

Query:  REANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL
          A  W  F++ +++PT++++TVS  R+LL  +I  S  IDVG+IIV +++ C  KK   L FPN IT LC++  V EN  D IL
Subjt:  REANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.6e-1930.33Show/hide
Query:  IADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------QGTVVAVKIEKRMFQ--------------SAYLKRE---
        +  H W+ F      VNA +V+EFY+NI + +   V+VRG+ + ++P+AIN            T  A +++   +Q                 LKR+   
Subjt:  IADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------QGTVVAVKIEKRMFQ--------------SAYLKRE---

Query:  -------ANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPN
                  W  F++ +++PT+H++TVS +R+LL  +IL   +ID+GKIIV     C K++   L FPN IT LC++  V E   D IL     ++   
Subjt:  -------ANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPN

Query:  LARLQRTQEAR
        +  L   +EA+
Subjt:  LARLQRTQEAR

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.9e-2336.53Show/hide
Query:  GDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------------------------QGTVVAVKIEK
        G LP F+   I  H+W+ FCA  E     +VREFYAN+       V VRGV+V WS  AINA                           +   VA     
Subjt:  GDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------------------------QGTVVAVKIEK

Query:  RMFQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL
           Q AY      L   A  W  F++  +LPTTH  TVS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P    +  L
Subjt:  RMFQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL

Query:  FDKGIIDTPNLARLQRTQE
         + G ID   +AR+  TQE
Subjt:  FDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-1934.93Show/hide
Query:  EREKKEAEEKVREEAEKKAE--EERLLKR--RAEKGKSVAEASEEPDEIEEPQLPGFSGDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKED
        +R  ++A + V+ E E  A   E  +  R   AEKG  V + SE              G LP F+   I  H+W+ FCA  E     +VREFYAN+   +
Subjt:  EREKKEAEEKVREEAEKKAE--EERLLKR--RAEKGKSVAEASEEPDEIEEPQLPGFSGDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKED

Query:  GFQVIVRGVEVDWSPSAINA--------------------------QGTVVAVKIEKRM-FQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRER
           V VRGV+V WS  AINA                            TV A   E  +  Q AY      L   A  W  F++ R+LPTTH  TVS++R
Subjt:  GFQVIVRGVEVDWSPSAINA--------------------------QGTVVAVKIEKRM-FQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRER

Query:  VLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL
        +LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  VLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]6.6e-2035.2Show/hide
Query:  LPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVR-GVEVDWS------PSAINAQGTVVAVKIEKRMFQSAYLKREANTWMGFIRQR
        +P  +R  I    WE FC      + ++VREFYA++  +D  +VIVR    ++W           N     +         Q  YLK  A  W  F+R  
Subjt:  LPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVR-GVEVDWS------PSAINAQGTVVAVKIEKRMFQSAYLKREANTWMGFIRQR

Query:  MLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL-QRTQEARQG
         +P +H ST+S E +LL +AIL   SI+VGKII+ EI  C KKK    +FP+ IT LC +A V         + +G I   +L RL +R  E  QG
Subjt:  MLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL-QRTQEARQG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-2336.53Show/hide
Query:  GDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------------------------QGTVVAVKIEK
        G LP F+   I  H+W+ FCA  E     +VREFYAN+       V VRGV+V WS  AINA                           +   VA     
Subjt:  GDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------------------------QGTVVAVKIEK

Query:  RMFQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL
           Q AY      L   A  W  F++  +LPTTH  TVS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P    +  L
Subjt:  RMFQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL

Query:  FDKGIIDTPNLARLQRTQE
         + G ID   +AR+  TQE
Subjt:  FDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)5.4e-2034.93Show/hide
Query:  EREKKEAEEKVREEAEKKAE--EERLLKR--RAEKGKSVAEASEEPDEIEEPQLPGFSGDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKED
        +R  ++A + V+ E E  A   E  +  R   AEKG  V + SE              G LP F+   I  H+W+ FCA  E     +VREFYAN+   +
Subjt:  EREKKEAEEKVREEAEKKAE--EERLLKR--RAEKGKSVAEASEEPDEIEEPQLPGFSGDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKED

Query:  GFQVIVRGVEVDWSPSAINA--------------------------QGTVVAVKIEKRM-FQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRER
           V VRGV+V WS  AINA                            TV A   E  +  Q AY      L   A  W  F++ R+LPTTH  TVS++R
Subjt:  GFQVIVRGVEVDWSPSAINA--------------------------QGTVVAVKIEKRM-FQSAY------LKREANTWMGFIRQRMLPTTHDSTVSRER

Query:  VLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL
        +LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  VLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL

A0A5D2B8V0 Uncharacterized protein3.2e-2035.2Show/hide
Query:  LPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVR-GVEVDWS------PSAINAQGTVVAVKIEKRMFQSAYLKREANTWMGFIRQR
        +P  +R  I    WE FC      + ++VREFYA++  +D  +VIVR    ++W           N     +         Q  YLK  A  W  F+R  
Subjt:  LPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVR-GVEVDWS------PSAINAQGTVVAVKIEKRMFQSAYLKREANTWMGFIRQR

Query:  MLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL-QRTQEARQG
         +P +H ST+S E +LL +AIL   SI+VGKII+ EI  C KKK    +FP+ IT LC +A V         + +G I   +L RL +R  E  QG
Subjt:  MLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL-QRTQEARQG

A0A6A2YMQ9 Uncharacterized protein3.5e-1935.14Show/hide
Query:  WELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAI----NAQGTV-VAVKIEKRMFQSAY----------------------------LK
        W+ F     SVNA VV+EFYANI K +   + VRG ++ ++PSAI    + Q  V    K E+    + Y                            L+
Subjt:  WELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAI----NAQGTV-VAVKIEKRMFQSAY----------------------------LK

Query:  REANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL
          A  W  F++ +++PT++++TVS  R+LL  +I  S  IDVG+IIV +++ C  KK   L FPN IT LC++  V EN  D IL
Subjt:  REANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL

A0A6A2ZUE4 Uncharacterized protein2.7e-1930.33Show/hide
Query:  IADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------QGTVVAVKIEKRMFQ--------------SAYLKRE---
        +  H W+ F      VNA +V+EFY+NI + +   V+VRG+ + ++P+AIN            T  A +++   +Q                 LKR+   
Subjt:  IADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINA---------QGTVVAVKIEKRMFQ--------------SAYLKRE---

Query:  -------ANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPN
                  W  F++ +++PT+H++TVS +R+LL  +IL   +ID+GKIIV     C K++   L FPN IT LC++  V E   D IL     ++   
Subjt:  -------ANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPN

Query:  LARLQRTQEAR
        +  L   +EA+
Subjt:  LARLQRTQEAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTGTCTGTTACCCCTGAGGTACAGAAAGTAAAGGCGAAGAAGAAGAAGACACCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGAGCAAGAAGCTGTCCAGAAGGCGACAGAAGATGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTG
AAGTAGAGAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGCCGAGGAAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCG
GAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACCTGATGAGATAGAAGAGCCACAGTTGCCAGGATTTAGCGGTGATCTTCCGCATTTTCTAAGGACCGGCATTGC
AGACCACGACTGGGAGTTGTTTTGTGCAAAGCTTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTC
GGGGAGTCGAAGTCGACTGGAGTCCTAGTGCTATTAACGCACAGGGCACGGTGGTAGCTGTCAAAATAGAGAAAAGGATGTTTCAGTCAGCTTACCTGAAGAGGGAAGCA
AACACATGGATGGGGTTTATTAGACAGAGGATGCTTCCAACGACTCATGATTCGACGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCAT
TGATGTAGGGAAGATTATTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTC
CAGAGAATGAAGGAGATGTTATTTTATTTGACAAGGGAATCATCGACACGCCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGC
ATCAACACGATTTTAGAACAACTGGCACTGTCGGCCAGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACATTCTGGAACTATGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTGTCTGTTACCCCTGAGGTACAGAAAGTAAAGGCGAAGAAGAAGAAGACACCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGAGCAAGAAGCTGTCCAGAAGGCGACAGAAGATGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTG
AAGTAGAGAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGCCGAGGAAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCG
GAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACCTGATGAGATAGAAGAGCCACAGTTGCCAGGATTTAGCGGTGATCTTCCGCATTTTCTAAGGACCGGCATTGC
AGACCACGACTGGGAGTTGTTTTGTGCAAAGCTTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTC
GGGGAGTCGAAGTCGACTGGAGTCCTAGTGCTATTAACGCACAGGGCACGGTGGTAGCTGTCAAAATAGAGAAAAGGATGTTTCAGTCAGCTTACCTGAAGAGGGAAGCA
AACACATGGATGGGGTTTATTAGACAGAGGATGCTTCCAACGACTCATGATTCGACGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCAT
TGATGTAGGGAAGATTATTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTC
CAGAGAATGAAGGAGATGTTATTTTATTTGACAAGGGAATCATCGACACGCCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGC
ATCAACACGATTTTAGAACAACTGGCACTGTCGGCCAGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACATTCTGGAACTATGTGTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERENEEEEVSVTPEVQKVKAKKKKTPEEKEAKRRRRQQRAEEQEAVQKATEDVTTTVEEGNPKEPEVENAEKEEREKKEAEEKVREEAEKKAEEERLLKRRA
EKGKSVAEASEEPDEIEEPQLPGFSGDLPHFLRTGIADHDWELFCAKLESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINAQGTVVAVKIEKRMFQSAYLKREA
NTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYG
INTILEQLALSASRQEFAERQALTFWNYV