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Spg032278 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032278
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationscaffold2:35242067..35243605
RNA-Seq ExpressionSpg032278
SyntenySpg032278
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.4e-3345.68Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++AASID W + + VISVDG ++KNK+ GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]5.2e-3343.83Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WI+RKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN ++G+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++ ASID W + +PVISVDG ++KN + GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]9.5e-3546.3Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++AASID W + +PVISVDG ++KNK+ GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.8e-3444.83Show/hide
Query:  TCPCDANLSQLK-GQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEE
        +CP     S  K   +WIVRKFI  H C  DVV+NDH+QA +                                SV   YDKAW GRE  LN +RG+PE+
Subjt:  TCPCDANLSQLK-GQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEE

Query:  SYVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        SY  +  F+  LI  NPGTYTA+E D   RFKF+FM++AASID W + +PVISVDG ++KNK+ GTL++ CT +
Subjt:  SYVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]1.6e-3445.09Show/hide
Query:  CPCDANLSQL-KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEES
        CP     S L K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+P++S
Subjt:  CPCDANLSQL-KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEES

Query:  YVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        YV +  F+  LI  NPGTYTA+E D   RFKF+FM++A SID W + +PVISVDG ++KNK+ GTL++ACT +
Subjt:  YVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958991.3e-3444.83Show/hide
Query:  TCPCDANLSQLK-GQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEE
        +CP     S  K   +WIVRKFI  H C  DVV+NDH+QA +                                SV   YDKAW GRE  LN +RG+PE+
Subjt:  TCPCDANLSQLK-GQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEE

Query:  SYVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        SY  +  F+  LI  NPGTYTA+E D   RFKF+FM++AASID W + +PVISVDG ++KNK+ GTL++ CT +
Subjt:  SYVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

A0A1S4E0D5 uncharacterized protein LOC1079912537.8e-3545.09Show/hide
Query:  CPCDANLSQL-KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEES
        CP     S L K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+P++S
Subjt:  CPCDANLSQL-KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEES

Query:  YVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        YV +  F+  LI  NPGTYTA+E D   RFKF+FM++A SID W + +PVISVDG ++KNK+ GTL++ACT +
Subjt:  YVQIPEFAARLIERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

A0A5A7V1Z6 CCHC-type domain-containing protein6.6e-3445.68Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++AASID W + + VISVDG ++KNK+ GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like2.5e-3343.83Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WI+RKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN ++G+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++ ASID W + +PVISVDG ++KN + GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

A0A5D3E198 MuDRA-like transposase4.6e-3546.3Show/hide
Query:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL
        K  +WIVRKF + H C  DVV+NDH+QA +                                 V   YDKAWRGRE  LN +RG+PE+SY  +  F+  L
Subjt:  KGQLWIVRKFINEHTCFFDVVQNDHRQAMA--------------------------------SVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARL

Query:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE
        I  NPGTYTA+E D   RFKF+FM++AASID W + +PVISVDG ++KNK+ GTL++ACT +
Subjt:  IERNPGTYTAQEIDSNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATAACGGTACTCGCTTATCCTTCTAACGCTGACAACGCACCAGTGACGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGGGCAGCTGTGGATTGTGAGGAA
GTTTATCAACGAACACACTTGTTTTTTTGATGTCGTTCAGAATGATCACAGGCAAGCAATGGCGAGTGTTGCGTGTGATTATGACAAAGCATGGAGGGGTAGAGAAAATA
CGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGTGCAAATTCCAGAGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAGGAAATTGAT
TCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATAGACGGGTGGAAACACCGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATT
CAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCATAACGGTACTCGCTTATCCTTCTAACGCTGACAACGCACCAGTGACGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGGGCAGCTGTGGATTGTGAGGAA
GTTTATCAACGAACACACTTGTTTTTTTGATGTCGTTCAGAATGATCACAGGCAAGCAATGGCGAGTGTTGCGTGTGATTATGACAAAGCATGGAGGGGTAGAGAAAATA
CGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGTGCAAATTCCAGAGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAGGAAATTGAT
TCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATAGACGGGTGGAAACACCGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATT
CAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
Protein sequenceShow/hide protein sequence
MCITVLAYPSNADNAPVTCPCDANLSQLKGQLWIVRKFINEHTCFFDVVQNDHRQAMASVACDYDKAWRGRENTLNELRGSPEESYVQIPEFAARLIERNPGTYTAQEID
SNDRFKFFFMSIAASIDGWKHRLPVISVDGTSLKNKFSGTLLTACTFEVRF