; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032280 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032280
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold2:34678365..34681596
RNA-Seq ExpressionSpg032280
SyntenySpg032280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]2.7e-0542.74Show/hide
Query:  CKPETSLGSFSLVIY---------------CGSWIKVVGISGL--IRWES-RF-------------HSFRPRGNISSLQTRELAKTVEIELLVPDNCQSL
        CKPE SLGSF LVI                C   I + G+S L  +R ES RF              S  PRGN  +L T +L KTVEIEL VPD   + 
Subjt:  CKPETSLGSFSLVIY---------------CGSWIKVVGISGL--IRWES-RF-------------HSFRPRGNISSLQTRELAKTVEIELLVPDNCQSL

Query:  FLLKDSKSSSSTWVELY
           + SKS+SSTW+ELY
Subjt:  FLLKDSKSSSSTWVELY
TrEMBL top hitse value%identityAlignment
A0A5A7UAH6 CCHC-type domain-containing protein1.3e-0542.74Show/hide
Query:  CKPETSLGSFSLVIY---------------CGSWIKVVGISGL--IRWES-RF-------------HSFRPRGNISSLQTRELAKTVEIELLVPDNCQSL
        CKPE SLGSF LVI                C   I + G+S L  +R ES RF              S  PRGN  +L T +L KTVEIEL VPD   + 
Subjt:  CKPETSLGSFSLVIY---------------CGSWIKVVGISGL--IRWES-RF-------------HSFRPRGNISSLQTRELAKTVEIELLVPDNCQSL

Query:  FLLKDSKSSSSTWVELY
           + SKS+SSTW+ELY
Subjt:  FLLKDSKSSSSTWVELY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGCAACTTGAAGCAAGCATGCACGACACGAGAGGAGCGAGAGAGCTCTCGGCAAAGAGAGACTCCAACGGGTAAAACTTCTAACCCTTCTACTAACCCATCTTC
TTCTTGCAGGGACAACACTTTCATGACTTACAGTGCAAGAAAGAAGGAGTCAAAGAAGGTTGCACCCGAAAACCCTCTTATCATCGAGCCCCACAAAGTAGCCAGAATGC
CACCAGATGTTTTCGAAGAGATGATCCGACAAGCCGTGGCACAAGCCCTCATTATTGTCGAAGGTTATAGGTGTAAACCCGAGACTTCCCTTGGATCATTTTCTCTTGTC
ATCTATTGTGGAAGTTGGATTAAAGTTGTTGGGATTTCTGGACTCATCCGTTGGGAATCTCGTTTTCACTCCTTCAGGCCAAGAGGAAATATTTCGAGTCTACAGACTAG
GGAACTAGCCAAGACTGTAGAGATCGAGCTCCTGGTGCCTGATAACTGCCAAAGTCTGTTTCTGCTGAAAGATTCCAAATCAAGCTCCAGTACGTGGGTGGAGTTGTACA
TTGTGTTTAACGATTCAGCAGGGTCCACAGCCTTTGAGCCATTACACAAGGCTAAAAGTGAGGCTGATCTGCTGCAAGAAAGAGAAGAAGAGGCCCTTGAGGGGTCAAAA
GAAGAAAATCCAGAACAAGAAGAAGAAAAAGAGGAAGAGAATGAAGGACAAAATGCGACTGCATCTGGGCCGAATTCTGAAGAAGACCGAGAAAAGGCCACTGAAGAACA
ACCAGCTTATGAGACCTTGGATCTGAAGGATTGGAACTCCCTAATTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGCAACTTGAAGCAAGCATGCACGACACGAGAGGAGCGAGAGAGCTCTCGGCAAAGAGAGACTCCAACGGGTAAAACTTCTAACCCTTCTACTAACCCATCTTC
TTCTTGCAGGGACAACACTTTCATGACTTACAGTGCAAGAAAGAAGGAGTCAAAGAAGGTTGCACCCGAAAACCCTCTTATCATCGAGCCCCACAAAGTAGCCAGAATGC
CACCAGATGTTTTCGAAGAGATGATCCGACAAGCCGTGGCACAAGCCCTCATTATTGTCGAAGGTTATAGGTGTAAACCCGAGACTTCCCTTGGATCATTTTCTCTTGTC
ATCTATTGTGGAAGTTGGATTAAAGTTGTTGGGATTTCTGGACTCATCCGTTGGGAATCTCGTTTTCACTCCTTCAGGCCAAGAGGAAATATTTCGAGTCTACAGACTAG
GGAACTAGCCAAGACTGTAGAGATCGAGCTCCTGGTGCCTGATAACTGCCAAAGTCTGTTTCTGCTGAAAGATTCCAAATCAAGCTCCAGTACGTGGGTGGAGTTGTACA
TTGTGTTTAACGATTCAGCAGGGTCCACAGCCTTTGAGCCATTACACAAGGCTAAAAGTGAGGCTGATCTGCTGCAAGAAAGAGAAGAAGAGGCCCTTGAGGGGTCAAAA
GAAGAAAATCCAGAACAAGAAGAAGAAAAAGAGGAAGAGAATGAAGGACAAAATGCGACTGCATCTGGGCCGAATTCTGAAGAAGACCGAGAAAAGGCCACTGAAGAACA
ACCAGCTTATGAGACCTTGGATCTGAAGGATTGGAACTCCCTAATTCCGTAA
Protein sequenceShow/hide protein sequence
MRSNLKQACTTREERESSRQRETPTGKTSNPSTNPSSSCRDNTFMTYSARKKESKKVAPENPLIIEPHKVARMPPDVFEEMIRQAVAQALIIVEGYRCKPETSLGSFSLV
IYCGSWIKVVGISGLIRWESRFHSFRPRGNISSLQTRELAKTVEIELLVPDNCQSLFLLKDSKSSSSTWVELYIVFNDSAGSTAFEPLHKAKSEADLLQEREEEALEGSK
EENPEQEEEKEEENEGQNATASGPNSEEDREKATEEQPAYETLDLKDWNSLIP