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Spg032290 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032290
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold2:34380698..34382748
RNA-Seq ExpressionSpg032290
SyntenySpg032290
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]3.9e-2150.76Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQPLQ+L +T      LFGLSY EG KRP+GNR SLQTGELDKTV   +   +VL+     D D                             ++VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELPVPDTLPTSAES RS+S+TWLELY ES+H+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.3e-2050.76Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQPLQ+L +T      LFGL Y EG KRPRGNR+SLQTGELDKTV   +   +VL+     D D                              +VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELPVPDTLPTSAESS S+SSTWLEL  E VH+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0053276.1 uncharacterized protein E6C27_scaffold102G00750 [Cucumis melo var. makuwa]3.1e-1850Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQ LQ+L +T      L GLSY EG  RPRGNR SLQTG+LDKTV  ++   +VL+     D D             +   L+   PT       VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELP+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]8.0e-2767.29Show/hide
Query:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA
        PRGNRSSLQTGELDKTV   +   +VL+          PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSA
Subjt:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA

Query:  ESSRSSS
        ESS S+S
Subjt:  ESSRSSS

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]8.0e-2767.29Show/hide
Query:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA
        PRGNRSSLQTGELDKTV   +   +VL+          PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSA
Subjt:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA

Query:  ESSRSSS
        ESS S+S
Subjt:  ESSRSSS

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein3.5e-2050.76Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQPLQ+L +T      LFGL Y EG KRPRGNR+SLQTGELDKTV   +   +VL+     D D                              +VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELPVPDTLPTSAESS S+SSTWLEL  E VH+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7UGD0 Uncharacterized protein1.5e-1850Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQ LQ+L +T      L GLSY EG  RPRGNR SLQTG+LDKTV  ++   +VL+     D D             +   L+   PT       VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELP+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7VGQ5 Uncharacterized protein3.9e-2767.29Show/hide
Query:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA
        PRGNRSSLQTGELDKTV   +   +VL+          PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSA
Subjt:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA

Query:  ESSRSSS
        ESS S+S
Subjt:  ESSRSSS

A0A5D3BG85 Uncharacterized protein3.9e-2767.29Show/hide
Query:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA
        PRGNRSSLQTGELDKTV   +   +VL+          PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSA
Subjt:  PRGNRSSLQTGELDKTVSDKMKFENVLKRL--------PHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSA

Query:  ESSRSSS
        ESS S+S
Subjt:  ESSRSSS

A0A5D3DIM8 Uncharacterized protein1.9e-2150.76Show/hide
Query:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        MQSQPLQ+L +T      LFGLSY EG KRP+GNR SLQTGELDKTV   +   +VL+     D D                             ++VEI
Subjt:  MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        ELPVPDTLPTSAES RS+S+TWLELY ES+H+
Subjt:  ELPVPDTLPTSAESSRSSSSTWLELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGGCCAAGAGGAAATAGGTCGAG
TCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAAGTTCGAAAATGTTCTTAAACGGTTGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCC
CACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACG
TCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTGCATATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGGCCAAGAGGAAATAGGTCGAG
TCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAAGTTCGAAAATGTTCTTAAACGGTTGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCC
CACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACG
TCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTGCATATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MQSQPLQDLRSTCQPLVFLFGLSYTEGIKRPRGNRSSLQTGELDKTVSDKMKFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPT
SAESSRSSSSTWLELYIESVHIVNVL