; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032321 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032321
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:34390637..34392649
RNA-Seq ExpressionSpg032321
SyntenySpg032321
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043405.1 hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]3.1e-3846.79Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-------------LESIKKKLLKEGYSLPTTRKGLGYKSPEL
        A KE  + + T   +KGEASTS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +              L  I+KKLL+EG+ +P +RKG GYKSPE 
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-------------LESIKKKLLKEGYSLPTTRKGLGYKSPEL

Query:  VRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA
        + I R+ K KV D+NHITV EVD  +EKE   QR   F +IRP + R  VF+RLSV +TE +  Q T+S  + S  QRL+M   +E+ T      T+PSA
Subjt:  VRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA

Query:  FQRLNMPIGEEESTFLTP
        F+RL++   ++  T   P
Subjt:  FQRLNMPIGEEESTFLTP

KAA0047672.1 uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa]1.5e-3543.57Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRG
        A ++  +   T    K EASTS  K  ++ +E  SN PILRYVPLSR KKGESPF E  + +K    ++LKE +++     T+KGLGYKSPE +RITR+G
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRG

Query:  KAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMP
        K KV D+NHITV+EVD  + KE   QRT  F RI P +ARA VF+RLS+ E + +  Q T++  R S FQRL++   EE+        T+PSAF+RL++ 
Subjt:  KAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMP

Query:  IGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSAS
          +   T   P +       P +    S+ T   KK++S S
Subjt:  IGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSAS

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]2.2e-3942.86Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------
        A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E                                           
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------

Query:  -LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSS
         L S +KKLL+EG+ +P +RKGLGYKSPE +RITR+GK KV D NHITV+EVD  +EKE  +QRT  F RI P +ARA VF+RLS+ E + +  Q T++ 
Subjt:  -LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSS

Query:  TRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ
         R S FQRL++   EE+        T+PSAF+RL++   +   T   P + +
Subjt:  TRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-4031.87Show/hide
Query:  SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---
        SQEK   IE+++EGWT+V R KK+K +  +KESRL+ + +R  K+QK K KKK+++ K + E+ +DF    + +TLA++FP RFL D Q E    V    
Subjt:  SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---

Query:  --------------CHIVDVVEDDDVLASS--------SGTVAEPQAD----------------------------------------------------
                      C  +D  ++D +L S         SG V E + +                                                    
Subjt:  --------------CHIVDVVEDDDVLASS--------SGTVAEPQAD----------------------------------------------------

Query:  ---------------------------AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC---------------
                                   A +E+ +   T    K EASTS  K  +V DEK SN PILRYVPLSRRKKGESPF E                
Subjt:  ---------------------------AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC---------------

Query:  --------------------------------------------------------------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKA
                                                                      L S +KKLL+EG+++P +RKGLGYK PE +RITR+GK 
Subjt:  --------------------------------------------------------------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKA

Query:  KVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEEST
        KV D+NHITV+EVD  +EKE   QRT  F R+ P +ARA VF+RLS+ E E +  Q T+S  R S FQRL+M    E+ +
Subjt:  KVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEEST

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]2.4e-3841.22Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------
        A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E                                           
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------

Query:  -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETE
                   L S +KKLL+EG+ +P +RKGLGYKSPE +RITR+GK KV D+NHITV+EVD  +EKE  +QRT  F RI P +ARA VF+RLS+ E E
Subjt:  -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETE

Query:  EESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ
         +  Q T++  + S FQRL++   EE+        T+PSAF+RL++   +   T   P + +
Subjt:  EESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ

TrEMBL top hitse value%identityAlignment
A0A5A7TPR5 RNase H domain-containing protein1.5e-3846.79Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-------------LESIKKKLLKEGYSLPTTRKGLGYKSPEL
        A KE  + + T   +KGEASTS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +              L  I+KKLL+EG+ +P +RKG GYKSPE 
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-------------LESIKKKLLKEGYSLPTTRKGLGYKSPEL

Query:  VRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA
        + I R+ K KV D+NHITV EVD  +EKE   QR   F +IRP + R  VF+RLSV +TE +  Q T+S  + S  QRL+M   +E+ T      T+PSA
Subjt:  VRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA

Query:  FQRLNMPIGEEESTFLTP
        F+RL++   ++  T   P
Subjt:  FQRLNMPIGEEESTFLTP

A0A5A7UMY2 Reverse transcriptase domain-containing protein1.0e-3942.86Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------
        A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E                                           
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------

Query:  -LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSS
         L S +KKLL+EG+ +P +RKGLGYKSPE +RITR+GK KV D NHITV+EVD  +EKE  +QRT  F RI P +ARA VF+RLS+ E + +  Q T++ 
Subjt:  -LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSS

Query:  TRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ
         R S FQRL++   EE+        T+PSAF+RL++   +   T   P + +
Subjt:  TRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ

A0A5D3BY54 Ty3-gypsy retrotransposon protein7.3e-4131.87Show/hide
Query:  SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---
        SQEK   IE+++EGWT+V R KK+K +  +KESRL+ + +R  K+QK K KKK+++ K + E+ +DF    + +TLA++FP RFL D Q E    V    
Subjt:  SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---

Query:  --------------CHIVDVVEDDDVLASS--------SGTVAEPQAD----------------------------------------------------
                      C  +D  ++D +L S         SG V E + +                                                    
Subjt:  --------------CHIVDVVEDDDVLASS--------SGTVAEPQAD----------------------------------------------------

Query:  ---------------------------AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC---------------
                                   A +E+ +   T    K EASTS  K  +V DEK SN PILRYVPLSRRKKGESPF E                
Subjt:  ---------------------------AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC---------------

Query:  --------------------------------------------------------------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKA
                                                                      L S +KKLL+EG+++P +RKGLGYK PE +RITR+GK 
Subjt:  --------------------------------------------------------------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKA

Query:  KVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEEST
        KV D+NHITV+EVD  +EKE   QRT  F R+ P +ARA VF+RLS+ E E +  Q T+S  R S FQRL+M    E+ +
Subjt:  KVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEEST

A0A5D3C8N8 Ribonuclease H7.0e-3643.57Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRG
        A ++  +   T    K EASTS  K  ++ +E  SN PILRYVPLSR KKGESPF E  + +K    ++LKE +++     T+KGLGYKSPE +RITR+G
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRG

Query:  KAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMP
        K KV D+NHITV+EVD  + KE   QRT  F RI P +ARA VF+RLS+ E + +  Q T++  R S FQRL++   EE+        T+PSAF+RL++ 
Subjt:  KAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMP

Query:  IGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSAS
          +   T   P +       P +    S+ T   KK++S S
Subjt:  IGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSAS

A0A5D3DXC7 Reverse transcriptase domain-containing protein1.2e-3841.22Show/hide
Query:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------
        A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E                                           
Subjt:  AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------------------------------------------

Query:  -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETE
                   L S +KKLL+EG+ +P +RKGLGYKSPE +RITR+GK KV D+NHITV+EVD  +EKE  +QRT  F RI P +ARA VF+RLS+ E E
Subjt:  -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETE

Query:  EESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ
         +  Q T++  + S FQRL++   EE+        T+PSAF+RL++   +   T   P + +
Subjt:  EESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCATTCGTCACAAAAAGCAAAAGCAGAGTTACACACGGAAAGAGTCTCG
TCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAAGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACATTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCTTGCTAGCTCCTCGGGAACGGTGGCAGAGCCACAAGCAGATGCAAAAAAGGAAGCTGTTGAAGATGTGAATACTACCGACCTGAAAAAGGGTGAAGCGTCTAC
AAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTGTCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAAT
GTTTAGAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAACTGGTTCGCATAACAAGAAGAGGG
AAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACC
AATTGCTCGTGCTTTAGTTTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCAAAGGTTAAGTA
TGCCCATTGGGGAAGAAGAGAGTACATTTTCAAATCCGGATGTCACTCAACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAAGAGAGTACATTTTTAACT
CCGAATGTGACTCAACCATCAATTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCATTCGTCACAAAAAGCAAAAGCAGAGTTACACACGGAAAGAGTCTCG
TCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAAGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACATTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCTTGCTAGCTCCTCGGGAACGGTGGCAGAGCCACAAGCAGATGCAAAAAAGGAAGCTGTTGAAGATGTGAATACTACCGACCTGAAAAAGGGTGAAGCGTCTAC
AAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTGTCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAAT
GTTTAGAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAACTGGTTCGCATAACAAGAAGAGGG
AAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACC
AATTGCTCGTGCTTTAGTTTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCAAAGGTTAAGTA
TGCCCATTGGGGAAGAAGAGAGTACATTTTCAAATCCGGATGTCACTCAACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAAGAGAGTACATTTTTAACT
CCGAATGTGACTCAACCATCAATTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCATGA
Protein sequenceShow/hide protein sequence
MKGSQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
DVLASSSGTVAEPQADAKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRG
KAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLT
PNVTQPSIFQRLSVTTRRDKKEQSASS