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Spg032342 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032342
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold2:36037640..36038502
RNA-Seq ExpressionSpg032342
SyntenySpg032342
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]3.1e-0939.58Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY
        V F    IN +Y +K   N  G+ +  NP A+ +++AL+ +   G +W     +   L P+DL  E +VWL FIK  +MPT HD+TIS++ +MLLY
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]3.4e-0841.24Show/hide
Query:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY
        MV+F    +N +Y ++         + + PS   M+ AL+ VA  G +W  +  K   L P +LK  ++VWL FIK  LMPT HDNTIS++R+MLLY
Subjt:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.9e-1241Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASLR
        VSFS+ DIN +Y++K      GN +I +P+ +QM++ALQ++   G +W  S K V +L    L  E  +W++ +K  L+ TTHD T+S DRVM  Y  +R
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASLR

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]6.3e-1035.11Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVML
        V FS+ DIN +Y++K  L+  GN +I +P    M++ L+++   G QW  S K +K+L  + L PE+ +W++ +K  L+PT+H+ T+S   +++
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVML

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]3.5e-1332.02Show/hide
Query:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL
        +V FS+ DIN +Y++K   +  GN +I +P  ++M++AL+ +   G QW  S K +K+L  S L PE+ +W++ +K  ++PT+HD T+S DRVM  Y   
Subjt:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL

Query:  RLCQRLKIVPGKDEECHFFKPTIDLS-LIGKLQQNSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP
                       C      ID+S LI    + + QRK +   S     A PN           + P+  TPF  P
Subjt:  RLCQRLKIVPGKDEECHFFKPTIDLS-LIGKLQQNSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-0735.35Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL
        VS+S   IN V+ +  P++   ++ I N +   +   L+ VA  G +W  S +   + + S L P + VW HF+K+ L+PTTH  T+S DR++LL++ L
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL

A0A2P5BCG4 Uncharacterized protein (Fragment)4.8e-0835.35Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL
        VS+S   IN V+ +  P++   ++ I+N + + +   L+ VA  G +W  S +   + + S L P + VW HF+K+ L+PTTH  T+S DR++LL++ L
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL

A0A2P5CPE8 Uncharacterized protein1.8e-0733.33Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL
        V  S+  IN +Y +  P++   ++ +   +  ++   L+ VA  G +W  S +   + + S L P + VW HF+K+ L+PTTH  T+S +RV+LLY+ L
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASL

A0A5A7TZE0 Protein MNN4-like1.7e-0841.24Show/hide
Query:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY
        MV+F    +N +Y ++         + + PS   M+ AL+ VA  G +W  +  K   L P +LK  ++VWL FIK  LMPT HDNTIS++R+MLLY
Subjt:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY

A0A5D3CW17 Uncharacterized protein1.5e-0939.58Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY
        V F    IN +Y +K   N  G+ +  NP A+ +++AL+ +   G +W     +   L P+DL  E +VWL FIK  +MPT HD+TIS++ +MLLY
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCAAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAAGGAGGCCAATGGAAAGAGTCACAGAAGAAAGTGAAGTCTCTAGTGCCAAGCGACCTGAAGCCAGAATCGGCAGTTTGGCTTCACT
TCATCAAGAACTGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTCATGCTACTCTATGCATCATTAAGGCTCTGTCAAAGGTTGAAGATCGTTCCA
GGCAAGGATGAGGAGTGTCACTTCTTCAAGCCGACTATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAATAGCATCCAGAGGAAGGACAAAGCCTCCACATCTCAGGC
TACTCCACCTGCAGAGCCGAATGTAGCTTCTCCATCCCAGCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGCTTTCGCTGC
TACCTCAAGAAGACAAGGATTCGGATGAAGAGGAAGAAGAGAATGACGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCAAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAAGGAGGCCAATGGAAAGAGTCACAGAAGAAAGTGAAGTCTCTAGTGCCAAGCGACCTGAAGCCAGAATCGGCAGTTTGGCTTCACT
TCATCAAGAACTGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTCATGCTACTCTATGCATCATTAAGGCTCTGTCAAAGGTTGAAGATCGTTCCA
GGCAAGGATGAGGAGTGTCACTTCTTCAAGCCGACTATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAATAGCATCCAGAGGAAGGACAAAGCCTCCACATCTCAGGC
TACTCCACCTGCAGAGCCGAATGTAGCTTCTCCATCCCAGCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGCTTTCGCTGC
TACCTCAAGAAGACAAGGATTCGGATGAAGAGGAAGAAGAGAATGACGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAG
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGGQWKESQKKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDNTISVDRVMLLYASLRLCQRLKIVP
GKDEECHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQLSLLPQEDKDSDEEEEENDDEDDEEKESSSDEE