; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032357 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032357
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:35186877..35188204
RNA-Seq ExpressionSpg032357
SyntenySpg032357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]5.4e-1729.82Show/hide
Query:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVA---------
        P F+T+VI Q+ W++FC HP   +VPLVREFYA L + +     V+   V F++  IN ++ ++  +     D     + +Q++  L  VA         
Subjt:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVA---------

Query:  ------------KRN----------KLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILAC-GRKKAGKLFFGSLITQLCQRVKIVPGKHKECHF
                    KR+          + MP+TH   ++ +RV+LLYSI+ G+ +NI  I  +EI AC   +K G L+F SLITQL  +  +   K +    
Subjt:  ------------KRN----------KLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILAC-GRKKAGKLFFGSLITQLCQRVKIVPGKHKECHF

Query:  FRPTIDLPLIGKLQQNNAQRKNKASTSQ
            I    I ++ Q  A    K   ++
Subjt:  FRPTIDLPLIGKLQQNNAQRKNKASTSQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.0e-2337.62Show/hide
Query:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRG------
        I+ R    EKGF    S   G LP F+ +VITQ+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS+S   IN V+ +  P+          
Subjt:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRG------

Query:  --NDAIK------------NPSAKQ----MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGS
          +D I             N SA+     ++ AL   AK      ++ L+PTTH   +S +R++LL+S++ G  IN+  +I  EI AC  +K G LFF S
Subjt:  --NDAIK------------NPSAKQ----MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGS

Query:  LITQLCQRVK
        LIT+LC+  +
Subjt:  LITQLCQRVK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-2435.55Show/hide
Query:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKN
        I+ R    EKGF    S   G LP F+ +VITQ+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKN

Query:  PSAKQMKEALKMVAK-------------------------------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFG
         + + +   L+ VA                                +++L+PTTH   +S +R++LL+S++ G  IN+  +I  EI AC  +K G LFF 
Subjt:  PSAKQMKEALKMVAK-------------------------------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFG

Query:  SLITQLCQRVK
        SLIT+LC+  +
Subjt:  SLITQLCQRVK

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]5.4e-1733.16Show/hide
Query:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLH-----------------------PRGNDAIKN
        P F+  VI Q+  + FCAHP++ +VPLVREFYA L +       V G  V  S   IN ++ +  P+                         R    + +
Subjt:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLH-----------------------PRGNDAIKN

Query:  PSAKQ-MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK
         SA   ++ +L   AK       ++L+PTTH  I+S   V+LLYSI+ G  IN+  II +EI     +++G LFF S +T+LCQ  +
Subjt:  PSAKQ-MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.8e-2131.38Show/hide
Query:  REIRAERRTKNKNEPIFAKSRGQE--RMEIIRKRDFLNEKGF---SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGK
        RE+  ER  +N ++ +  +S+  E    E I+ R    EK F   +++    P F+  VI Q+ WQ FCAHP++ +VPLVREFY  +         +RG 
Subjt:  REIRAERRTKNKNEPIFAKSRGQE--RMEIIRKRDFLNEKGF---SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGK

Query:  MVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVAK----------------------------RNKLMPTTHDNIISVERVMLLYSIMK
         V  S   IN ++ +  P+  H    + I  P    + E + +V                              +++L+PTTH   +S E V LLYS++ 
Subjt:  MVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVAK----------------------------RNKLMPTTHDNIISVERVMLLYSIMK

Query:  GLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        G  IN+  +I  EI AC  +K+G LFF SLIT +C+  +
Subjt:  GLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.9e-2437.62Show/hide
Query:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRG------
        I+ R    EKGF    S   G LP F+ +VITQ+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS+S   IN V+ +  P+          
Subjt:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRG------

Query:  --NDAIK------------NPSAKQ----MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGS
          +D I             N SA+     ++ AL   AK      ++ L+PTTH   +S +R++LL+S++ G  IN+  +I  EI AC  +K G LFF S
Subjt:  --NDAIK------------NPSAKQ----MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGS

Query:  LITQLCQRVK
        LIT+LC+  +
Subjt:  LITQLCQRVK

A0A2P5BCG4 Uncharacterized protein (Fragment)7.6e-2535.55Show/hide
Query:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKN
        I+ R    EKGF    S   G LP F+ +VITQ+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  IRKRDFLNEKGF----SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKN

Query:  PSAKQMKEALKMVAK-------------------------------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFG
         + + +   L+ VA                                +++L+PTTH   +S +R++LL+S++ G  IN+  +I  EI AC  +K G LFF 
Subjt:  PSAKQMKEALKMVAK-------------------------------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFG

Query:  SLITQLCQRVK
        SLIT+LC+  +
Subjt:  SLITQLCQRVK

A0A2P5BCT7 Uncharacterized protein (Fragment)2.6e-1733.16Show/hide
Query:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLH-----------------------PRGNDAIKN
        P F+  VI Q+  + FCAHP++ +VPLVREFYA L +       V G  V  S   IN ++ +  P+                         R    + +
Subjt:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLH-----------------------PRGNDAIKN

Query:  PSAKQ-MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK
         SA   ++ +L   AK       ++L+PTTH  I+S   V+LLYSI+ G  IN+  II +EI     +++G LFF S +T+LCQ  +
Subjt:  PSAKQ-MKEALKMVAK------RNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK

A0A2P5DAQ2 Uncharacterized protein1.3e-2131.38Show/hide
Query:  REIRAERRTKNKNEPIFAKSRGQE--RMEIIRKRDFLNEKGF---SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGK
        RE+  ER  +N ++ +  +S+  E    E I+ R    EK F   +++    P F+  VI Q+ WQ FCAHP++ +VPLVREFY  +         +RG 
Subjt:  REIRAERRTKNKNEPIFAKSRGQE--RMEIIRKRDFLNEKGF---SNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGK

Query:  MVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVAK----------------------------RNKLMPTTHDNIISVERVMLLYSIMK
         V  S   IN ++ +  P+  H    + I  P    + E + +V                              +++L+PTTH   +S E V LLYS++ 
Subjt:  MVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVAK----------------------------RNKLMPTTHDNIISVERVMLLYSIMK

Query:  GLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        G  IN+  +I  EI AC  +K+G LFF SLIT +C+  +
Subjt:  GLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVK

W9QTD9 Uncharacterized protein2.6e-1729.82Show/hide
Query:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVA---------
        P F+T+VI Q+ W++FC HP   +VPLVREFYA L + +     V+   V F++  IN ++ ++  +     D     + +Q++  L  VA         
Subjt:  PEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVA---------

Query:  ------------KRN----------KLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILAC-GRKKAGKLFFGSLITQLCQRVKIVPGKHKECHF
                    KR+          + MP+TH   ++ +RV+LLYSI+ G+ +NI  I  +EI AC   +K G L+F SLITQL  +  +   K +    
Subjt:  ------------KRN----------KLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILAC-GRKKAGKLFFGSLITQLCQRVKIVPGKHKECHF

Query:  FRPTIDLPLIGKLQQNNAQRKNKASTSQ
            I    I ++ Q  A    K   ++
Subjt:  FRPTIDLPLIGKLQQNNAQRKNKASTSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCAGAATGCAAACGCATTTGGGCCGCATTCTGAAGAAGGCCAATGAAGAACAGCAGGCTGATGAAGCTTTGGATCCTCTGTTTGAGTATGATGTGAGAGGACC
TCCACCAGCTGCTGATAGTACCTCTTCAGGAGAGAAGAAAGAAGAAGAGGAAATTGAAAAAGAGGAGGTTGAGACCTCCACTGATTCAGAAACCGAATCAGATTCTGAGA
TCAAGAAATTGGATGATGGCCAAATTCCTATCTCTGCAGCATTAAGAAAGAAGAGAAGAAGAGAAATTAGGGCTGAGAGGCGAACGAAGAATAAAAATGAACCCATTTTT
GCCAAGAGTCGAGGACAAGAAAGGATGGAGATTATAAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACACTGCCAGAGTTTGTAACCAAAGT
CATTACACAGTACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGGCGTGGTGCCTCTAGTTAGAGAATTCTATGCTGGTTTGAGGGAGGAGAGCATGAGTATGGCAG
TGGTTAGAGGGAAAATGGTCAGCTTTTCTTCTGTTGACATCAACAGGGTGTACAGAATCAAGGCACCCTTGCATCCAAGAGGGAATGACGCCATCAAGAACCCCTCGGCC
AAGCAGATGAAAGAAGCACTGAAAATGGTGGCCAAAAGGAACAAGTTGATGCCAACAACCCACGACAACATTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATCAT
GAAGGGGTTGGAGATAAATATTAGGAGCATCATCAGGGAAGAGATTCTTGCATGTGGAAGGAAGAAAGCAGGAAAGCTGTTCTTTGGGTCACTTATCACCCAATTGTGTC
AGAGGGTAAAGATAGTCCCTGGAAAGCATAAAGAGTGCCACTTCTTCAGGCCTACCATCGATTTACCTCTGATTGGGAAACTCCAACAGAACAATGCCCAAAGGAAGAAC
AAAGCTTCCACATCTCAAGCTACTCCACCACCGGGGTTGAATCCAGCTTCACCACCTCCTGAGCATACTCCTGTTTCAGGTCCTACACCATCATCAGAGGCCCTTGCACT
CGCCTTCCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCAGAATGCAAACGCATTTGGGCCGCATTCTGAAGAAGGCCAATGAAGAACAGCAGGCTGATGAAGCTTTGGATCCTCTGTTTGAGTATGATGTGAGAGGACC
TCCACCAGCTGCTGATAGTACCTCTTCAGGAGAGAAGAAAGAAGAAGAGGAAATTGAAAAAGAGGAGGTTGAGACCTCCACTGATTCAGAAACCGAATCAGATTCTGAGA
TCAAGAAATTGGATGATGGCCAAATTCCTATCTCTGCAGCATTAAGAAAGAAGAGAAGAAGAGAAATTAGGGCTGAGAGGCGAACGAAGAATAAAAATGAACCCATTTTT
GCCAAGAGTCGAGGACAAGAAAGGATGGAGATTATAAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACACTGCCAGAGTTTGTAACCAAAGT
CATTACACAGTACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGGCGTGGTGCCTCTAGTTAGAGAATTCTATGCTGGTTTGAGGGAGGAGAGCATGAGTATGGCAG
TGGTTAGAGGGAAAATGGTCAGCTTTTCTTCTGTTGACATCAACAGGGTGTACAGAATCAAGGCACCCTTGCATCCAAGAGGGAATGACGCCATCAAGAACCCCTCGGCC
AAGCAGATGAAAGAAGCACTGAAAATGGTGGCCAAAAGGAACAAGTTGATGCCAACAACCCACGACAACATTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATCAT
GAAGGGGTTGGAGATAAATATTAGGAGCATCATCAGGGAAGAGATTCTTGCATGTGGAAGGAAGAAAGCAGGAAAGCTGTTCTTTGGGTCACTTATCACCCAATTGTGTC
AGAGGGTAAAGATAGTCCCTGGAAAGCATAAAGAGTGCCACTTCTTCAGGCCTACCATCGATTTACCTCTGATTGGGAAACTCCAACAGAACAATGCCCAAAGGAAGAAC
AAAGCTTCCACATCTCAAGCTACTCCACCACCGGGGTTGAATCCAGCTTCACCACCTCCTGAGCATACTCCTGTTTCAGGTCCTACACCATCATCAGAGGCCCTTGCACT
CGCCTTCCGATAG
Protein sequenceShow/hide protein sequence
MKARMQTHLGRILKKANEEQQADEALDPLFEYDVRGPPPAADSTSSGEKKEEEEIEKEEVETSTDSETESDSEIKKLDDGQIPISAALRKKRRREIRAERRTKNKNEPIF
AKSRGQERMEIIRKRDFLNEKGFSNRAGTLPEFVTKVITQYKWQEFCAHPQEGVVPLVREFYAGLREESMSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSA
KQMKEALKMVAKRNKLMPTTHDNIISVERVMLLYSIMKGLEINIRSIIREEILACGRKKAGKLFFGSLITQLCQRVKIVPGKHKECHFFRPTIDLPLIGKLQQNNAQRKN
KASTSQATPPPGLNPASPPPEHTPVSGPTPSSEALALAFR