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Spg032370 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032370
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold2:36130845..36133578
RNA-Seq ExpressionSpg032370
SyntenySpg032370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]4.6e-0538.67Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIK
        VSFS+ DIN +Y++K      GN +I +P+ +QM++ALQ++   G++W  S K V +L S +L  E   W++ +K
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIK

XP_038885414.1 nucleolar protein 58-like [Benincasa hispida]3.9e-0433.33Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIK
        V FS+ DIN +Y+++   +  G+ +I +P  + M++AL+++A  G++W  S K +++L S +L PE   W++ +K
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIK

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]2.4e-0634.38Show/hide
Query:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIKNYKLFFGSLITQLCQRLKIVP
        V FS+ DIN +Y++K  L+  GN +I +P    M++ L+++   G QW  S K +K+L S+ L PE+  W++ +K   +      T  C  L I P
Subjt:  VSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIKNYKLFFGSLITQLCQRLKIVP

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.9e-0729.09Show/hide
Query:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIKNYKLFFGSLITQLCQRLKIVPGKD
        +V FS+ DIN +Y++K   +  GN +I +P  ++M++AL+ +   G QW  S K +K+L SS L PE+  W++ +K  +    +   +   R +++    
Subjt:  MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIKNYKLFFGSLITQLCQRLKIVPGKD

Query:  EECHFFKPTIDLS-LIGKLQQNSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP
          C      ID+S LI    + + QRK +   S     A PN           + P+  TPF  P
Subjt:  EECHFFKPTIDLS-LIGKLQQNSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCAAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAGGGAGTCCAATGGAAAAAGTCACAGAAGAAAGTGAAGTCTCTAGTGTCAAGCAACCTGAAGCCAGAATCGGCATTTTGGCTTCACT
TCATCAAAAACTACAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGTTGAAGATCGTTCCAGGCAAGGATGAGGAGTGTCACTTCTTCAAGCCGACTATT
GACCTGTCCTTGATTGGAAAGCTCCAACAAAATAGCATCCAGAGGAAGGACAAAGCCTCCACATCTCAGGCTACTCCACCTGCAGAGCCGAATGTAGCTTCTCCATCCCA
GCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGCTTGTTCAAATCAGGGAGAACCTAAAGACTTATTGGGCATATGCAAAGG
AGAGGGATGAAGCAAATAGAGAGTTCTATCTCTCTATAGCCCTAAAAAAACAGAGGAGATGTTGGAATTTCCCCAGAAATGCGACTGCATTTCTGGGAAGGCAAAATGAA
ATGCGACTGCATTTCTGGAAAAAAATCGAGACCGTTCCGAGTCGTCCTCGTGTCATTGTTGACGAGTCTTCTTCGCACCTAACCGACCGTTTTGACCCCGAAACCACTGG
GCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCATTTTCCACACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCAAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAGGGAGTCCAATGGAAAAAGTCACAGAAGAAAGTGAAGTCTCTAGTGTCAAGCAACCTGAAGCCAGAATCGGCATTTTGGCTTCACT
TCATCAAAAACTACAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGTTGAAGATCGTTCCAGGCAAGGATGAGGAGTGTCACTTCTTCAAGCCGACTATT
GACCTGTCCTTGATTGGAAAGCTCCAACAAAATAGCATCCAGAGGAAGGACAAAGCCTCCACATCTCAGGCTACTCCACCTGCAGAGCCGAATGTAGCTTCTCCATCCCA
GCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGCTTGTTCAAATCAGGGAGAACCTAAAGACTTATTGGGCATATGCAAAGG
AGAGGGATGAAGCAAATAGAGAGTTCTATCTCTCTATAGCCCTAAAAAAACAGAGGAGATGTTGGAATTTCCCCAGAAATGCGACTGCATTTCTGGGAAGGCAAAATGAA
ATGCGACTGCATTTCTGGAAAAAAATCGAGACCGTTCCGAGTCGTCCTCGTGTCATTGTTGACGAGTCTTCTTCGCACCTAACCGACCGTTTTGACCCCGAAACCACTGG
GCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCATTTTCCACACTATAA
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKKSQKKVKSLVSSNLKPESAFWLHFIKNYKLFFGSLITQLCQRLKIVPGKDEECHFFKPTI
DLSLIGKLQQNSIQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQLVQIRENLKTYWAYAKERDEANREFYLSIALKKQRRCWNFPRNATAFLGRQNE
MRLHFWKKIETVPSRPRVIVDESSSHLTDRFDPETTGQPSSTYFTAPQPFSTL