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Spg032376 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032376
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:36191037..36193748
RNA-Seq ExpressionSpg032376
SyntenySpg032376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-1729.17Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V +S   IN V+ +  P++   ++ I+N + + +   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH  T+S DR++LL+ ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS------IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQ------------
        G  INVG +I  EI A   +K   LFF SLIT+LC++      +  +   +T +    A   +A         +PS S  A A + R             
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS------IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQ------------

Query:  ----------------LVHIRENLKTYWAYAKERDEAIRE
                        L H  +  + +WAY+KERD A+++
Subjt:  ----------------LVHIRENLKTYWAYAKERDEAIRE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.1e-1737.78Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V  S+  IN +Y +  P++   ++ +   +  ++   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH  T+S +RV+LLY ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLC
        G  INVG II  EI AY  +K+  LFF SLIT++C
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLC

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.9e-1829.46Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V +S   IN V+ +  P++   ++ I N +  ++   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH   +S DR++LL+ ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS----IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYR---------------
        G  INVG +I  EI A   +K   LFF SLIT+LC++    +  +   +T +    A   +          +PS S  A A + R               
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS----IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYR---------------

Query:  --QLVHIRENLKTYWAYAKERDEAIREFYLSIALKKQRRSWNFPRNVTAFLGRQNEML
          Q  H  +  + +WAY+KERD A+++     AL+      NF R +  F     E+L
Subjt:  --QLVHIRENLKTYWAYAKERDEAIREFYLSIALKKQRRSWNFPRNVTAFLGRQNEML

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]1.8e-1639.66Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V FS+ DIN +Y++K      GN +I +P+ +QM++ALQ++   G++W  S K V +L    L  E  +W++ ++ RL+ TTHD T+S DRVM  YCI++
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILA
         + I+VG +I  ++ A
Subjt:  GLEINVGSIIRDEILA

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.3e-1531.67Show/hide
Query:  MVRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIM
        +V FS+ DIN +Y++K   +  GN +I +P  ++M++AL+ +   G QW  S K +K+L  S L  E+ +W++ ++ R++PT+HD T+S DRVM  YCI 
Subjt:  MVRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIM

Query:  KGLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP
         G+ I+V  +I                      Q  ++ QRK +   S     A PN           + P+  TPF  P
Subjt:  KGLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQSIQRKDKASTSQATPPAEPNV----------ASPSQHTPFTEP

TrEMBL top hitse value%identityAlignment
A0A2P5B5S0 Uncharacterized protein3.9e-1434.62Show/hide
Query:  INRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMKGLEINVG
        IN ++ +  P++   ++ + + +  ++   L+ VA  GV+W  S +     + S L   + VW HF+++ L+PTTH   +S +RV+LLY ++ G  INVG
Subjt:  INRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMKGLEINVG

Query:  SIIRDEILAYGRKKADKLFFGSLITQLCQS
         +I  EI A   +K+  LFF SLIT++C++
Subjt:  SIIRDEILAYGRKKADKLFFGSLITQLCQS

A0A2P5BCG4 Uncharacterized protein (Fragment)7.7e-1829.17Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V +S   IN V+ +  P++   ++ I+N + + +   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH  T+S DR++LL+ ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS------IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQ------------
        G  INVG +I  EI A   +K   LFF SLIT+LC++      +  +   +T +    A   +A         +PS S  A A + R             
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS------IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQ------------

Query:  ----------------LVHIRENLKTYWAYAKERDEAIRE
                        L H  +  + +WAY+KERD A+++
Subjt:  ----------------LVHIRENLKTYWAYAKERDEAIRE

A0A2P5CPE8 Uncharacterized protein1.0e-1737.78Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V  S+  IN +Y +  P++   ++ +   +  ++   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH  T+S +RV+LLY ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLC
        G  INVG II  EI AY  +K+  LFF SLIT++C
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLC

A0A2P5DAQ2 Uncharacterized protein1.8e-1434.62Show/hide
Query:  INRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMKGLEINVG
        IN ++ +  P++   ++ + + +  ++   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH  T+S + V LLY ++ G  INVG
Subjt:  INRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMKGLEINVG

Query:  SIIRDEILAYGRKKADKLFFGSLITQLCQS
         +I  EI A   +K+  LFF SLIT +C++
Subjt:  SIIRDEILAYGRKKADKLFFGSLITQLCQS

A0A2P5DXM3 Uncharacterized protein9.1e-1929.46Show/hide
Query:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK
        V +S   IN V+ +  P++   ++ I N +  ++   L+ VA  G +W  S +   + + S L   + VW HF+++RL+PTTH   +S DR++LL+ ++ 
Subjt:  VRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMK

Query:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS----IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYR---------------
        G  INVG +I  EI A   +K   LFF SLIT+LC++    +  +   +T +    A   +          +PS S  A A + R               
Subjt:  GLEINVGSIIRDEILAYGRKKADKLFFGSLITQLCQS----IQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYR---------------

Query:  --QLVHIRENLKTYWAYAKERDEAIREFYLSIALKKQRRSWNFPRNVTAFLGRQNEML
          Q  H  +  + +WAY+KERD A+++     AL+      NF R +  F     E+L
Subjt:  --QLVHIRENLKTYWAYAKERDEAIREFYLSIALKKQRRSWNFPRNVTAFLGRQNEML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCGAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAGGGAGTCCAATGGAAAGAGTCACAGAAGAAAGTGAAGTCTCTAGTGCCAAGCGACCTGAAGGCAGAATCGGTAGTTTGGCTTCACT
TCATCAGGAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTCATGCTACTCTATTGCATCATGAAGGGGTTGGAGATCAACGTGGGGAGCATA
ATCAGGGACGAGATTTTAGCTTATGGGAGAAAAAAAGCAGACAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGTCAAAGCATCCAGAGGAAGGACAAAGCCTCCAC
ATCTCAGGCTACTCCACCTGCAGAGCCGAATGTTGCTTCTCCATCCCAGCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGC
TTGTTCATATCAGGGAGAACCTGAAGACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCAATTAGAGAGTTCTATCTCTCTATAGCCCTAAAAAAACAGAGGAGAAGT
TGGAATTTCCCCAGAAATGTGACTGCATTTCTGGGTAGGCAAAATGAAATGCTACCGCATTTCTGGAAAAAAATCAAGACCGTTCCGAGTCGTCCGCGTGTCATTGTTTT
CGAGTCTTCTTCGCACCTAACCGACCGTTTTGACCCCGAAACCGACTGGGCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCATTTTCCACACTATAAAAGCTCGAG
ATTCGAAGTCAAATTCAAGCAGAATTCATTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGTTTCTCCTCAGTCGATATCAACAGGGTGTACAGGATCAAGACACCCTTGAACCCGAGAGGGAACGATGTTATCAGGAACCCGTCGGCCAAGCAGATGAAGGA
AGCACTTCAACTTGTGGCCAACAAGGGAGTCCAATGGAAAGAGTCACAGAAGAAAGTGAAGTCTCTAGTGCCAAGCGACCTGAAGGCAGAATCGGTAGTTTGGCTTCACT
TCATCAGGAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTCATGCTACTCTATTGCATCATGAAGGGGTTGGAGATCAACGTGGGGAGCATA
ATCAGGGACGAGATTTTAGCTTATGGGAGAAAAAAAGCAGACAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGTCAAAGCATCCAGAGGAAGGACAAAGCCTCCAC
ATCTCAGGCTACTCCACCTGCAGAGCCGAATGTTGCTTCTCCATCCCAGCACACTCCTTTTACAGAGCCATCACCATCATCGGAAGCCCTGGCCATTGCCTACCGCCAGC
TTGTTCATATCAGGGAGAACCTGAAGACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCAATTAGAGAGTTCTATCTCTCTATAGCCCTAAAAAAACAGAGGAGAAGT
TGGAATTTCCCCAGAAATGTGACTGCATTTCTGGGTAGGCAAAATGAAATGCTACCGCATTTCTGGAAAAAAATCAAGACCGTTCCGAGTCGTCCGCGTGTCATTGTTTT
CGAGTCTTCTTCGCACCTAACCGACCGTTTTGACCCCGAAACCGACTGGGCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCATTTTCCACACTATAAAAGCTCGAG
ATTCGAAGTCAAATTCAAGCAGAATTCATTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCTATGA
Protein sequenceShow/hide protein sequence
MVRFSSVDINRVYRIKTPLNPRGNDVIRNPSAKQMKEALQLVANKGVQWKESQKKVKSLVPSDLKAESVVWLHFIRNRLMPTTHDNTISVDRVMLLYCIMKGLEINVGSI
IRDEILAYGRKKADKLFFGSLITQLCQSIQRKDKASTSQATPPAEPNVASPSQHTPFTEPSPSSEALAIAYRQLVHIRENLKTYWAYAKERDEAIREFYLSIALKKQRRS
WNFPRNVTAFLGRQNEMLPHFWKKIKTVPSRPRVIVFESSSHLTDRFDPETDWATFQHLFHSSSTIFHTIKARDSKSNSSRIHLEEKGGDRTLARRL