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Spg032396 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032396
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF hand family protein
Genome locationscaffold2:29378762..29379139
RNA-Seq ExpressionSpg032396
SyntenySpg032396
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]3.8e-3970.08Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL   F +Q L     DP+ D+ EVVCHKF V+K+GGID   F S++RDILLAMA G
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK K+
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]5.3e-4171.65Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL V F +  L     DP+ D+ EVVCHKFQV+K+GGID + F S+IRDILLAMAQG
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK ++
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]7.6e-4071.65Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL   F +Q L     DP+ D+ EVVCHKF V+K+GGID K F S+IRDILLAMA G
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK K+
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]4.8e-3463.11Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLP
        MSVAFLNDTT+ +FINDTKIF++CVKESF+KLD+D DG LNA+EL   F   S DP+ D+ + VC KF V+K+GGI+   F S++ +ILLA+A GIGNLP
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLP

Query:  IQVALQQDSFLTKAVEHEKKKK
        +QVALQQD  L KAVEHE+ K+
Subjt:  IQVALQQDSFLTKAVEHEKKKK

XP_034925333.1 uncharacterized protein LOC118056988 [Populus alba]2.5e-2244.44Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFC--------NQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAM
        MS+A +N+TT+T F+ D K FE+CVKE F+ LDVDGDG L+  EL   FC        +   + +  +++ +  +F  D+NG ID + F  +IR+++ AM
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFC--------NQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAM

Query:  AQGIGNLPIQVALQQDSFLTKAVEHE
         +G+GN P+ VAL+ DS L KAVEHE
Subjt:  AQGIGNLPIQVALQQDSFLTKAVEHE

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein2.5e-4171.65Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL V F +  L     DP+ D+ EVVCHKFQV+K+GGID + F S+IRDILLAMAQG
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK ++
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

A0A1S3CI80 uncharacterized protein LOC1035010583.7e-4071.65Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL   F +Q L     DP+ D+ EVVCHKF V+K+GGID K F S+IRDILLAMA G
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK K+
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

A0A5A7VAA7 Calcium-binding EF hand family protein3.7e-4071.65Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL   F +Q L     DP+ D+ EVVCHKF V+K+GGID K F S+IRDILLAMA G
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK K+
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

A0A5D3B8A7 Calcium-binding EF hand family protein1.8e-3970.08Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        MSVAFLNDTT+TNFINDTKIF+DCVKESFKKLD D DG+LN +EL   F +Q L     DP+ D+ EVVCHKF V+K+GGID   F S++RDILLAMA G
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-----DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQDSFLTKAVEHEKKKK
        IGN P+QVALQQDSFL KAVE EK K+
Subjt:  IGNLPIQVALQQDSFLTKAVEHEKKKK

A0A6J1DWE2 uncharacterized protein LOC1110250962.3e-3463.11Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLP
        MSVAFLNDTT+ +FINDTKIF++CVKESF+KLD+D DG LNA+EL   F   S DP+ D+ + VC KF V+K+GGI+   F S++ +ILLA+A GIGNLP
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLP

Query:  IQVALQQDSFLTKAVEHEKKKK
        +QVALQQD  L KAVEHE+ K+
Subjt:  IQVALQQDSFLTKAVEHEKKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein9.3e-1233.87Show/hide
Query:  LNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADEL--------GVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIG
        +   TL  F++DTK FE    + F+ LD+D +G L+  EL         VE      D   ++Y  +  +F  D    +  K F  +I +IL AMA+GIG
Subjt:  LNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADEL--------GVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIG

Query:  NLPIQVALQQDSFLTKAVEHEKKK
        N P+ + +  D  + KAV HE K+
Subjt:  NLPIQVALQQDSFLTKAVEHEKKK

AT2G44310.1 Calcium-binding EF-hand family protein3.4e-1431.62Show/hide
Query:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-------------DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRD
        M V  ++ +T+ +F++D + F+  V E F  LD++ DG L+  EL   F +  L             D + ++Y+ +  KF  D++G +D++ F S ++ 
Subjt:  MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSL-------------DPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRD

Query:  ILLAMAQGIGNLPIQVAL--QQDSFLTKAVEHEKKK
        I+LA+A G+G+ PI + L    D+FL KA + E  K
Subjt:  ILLAMAQGIGNLPIQVAL--QQDSFLTKAVEHEKKK

AT4G38810.2 Calcium-binding EF-hand family protein1.7e-0529.2Show/hide
Query:  LNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCN---------QSLDPMKD-IYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG
        L+ + +   + + K+F+  V++ F++LD D DG L+  EL     +         Q   P  D IY  V ++F       +    F  ++ DILL MA G
Subjt:  LNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCN---------QSLDPMKD-IYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQG

Query:  IGNLPIQVALQQD
        +   PI V L+ D
Subjt:  IGNLPIQVALQQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATTAACGATACAAAGATATTCGAAGATTGCGTCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGA
TGGCTACCTCAACGCCGATGAACTTGGCGTCGAGTTTTGCAATCAATCATTAGATCCGATGAAAGATATCTATGAGGTTGTTTGTCATAAGTTTCAAGTGGACAAAAATG
GTGGAATTGATGTAAAGGGGTTTACGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAACAAGATAGTTTT
CTCACGAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGGAGAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATTAACGATACAAAGATATTCGAAGATTGCGTCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGA
TGGCTACCTCAACGCCGATGAACTTGGCGTCGAGTTTTGCAATCAATCATTAGATCCGATGAAAGATATCTATGAGGTTGTTTGTCATAAGTTTCAAGTGGACAAAAATG
GTGGAATTGATGTAAAGGGGTTTACGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAACAAGATAGTTTT
CTCACGAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGGAGAAAAATAG
Protein sequenceShow/hide protein sequence
MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLPIQVALQQDSF
LTKAVEHEKKKKGEK