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Spg032401 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032401
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold2:32325666..32328565
RNA-Seq ExpressionSpg032401
SyntenySpg032401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035299.1 hypothetical protein E6C27_scaffold228G00970 [Cucumis melo var. makuwa]1.1e-0444Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTW
        +NN F VQP N NPSRA+E+VEP VQD ++ LKGT     +   GVNSIL       P+ L      P +    W
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTW
KAA0045295.1 hypothetical protein E6C27_scaffold316G00550 [Cucumis melo var. makuwa]1.1e-0456Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
        +NN F VQP N NPSRA+E+V PFVQD ++ LKGT     +   GVNS+L
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
KAA0047005.1 hypothetical protein E6C27_scaffold230G001970 [Cucumis melo var. makuwa]8.3e-0543.42Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTWT
        +NN F  QP NRNPS+A+E+V P VQD ++ LKGT     +   GVNSIL       P+ L      P +  T WT
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTWT
KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]4.7e-0852Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGL---VPK-MDTPTRM
        +NN F VQP N+NPSRA+E+V P VQD ++ LKGT     +   GVN  L  YVPS PLG+    PK  D PTR+
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGL---VPK-MDTPTRM
KAA0056367.1 hypothetical protein E6C27_scaffold186G001040 [Cucumis melo var. makuwa]1.9e-0456Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
        +NN F VQP N+NPSRA+E+V P VQD ++ LKG      + R GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
TrEMBL top hitse value%identityAlignment
A0A5A7TV85 Uncharacterized protein5.3e-0556Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
        +NN F VQP N NPSRA+E+V PFVQD ++ LKGT     +   GVNS+L
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
A0A5A7U028 Uncharacterized protein4.0e-0543.42Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTWT
        +NN F  QP NRNPS+A+E+V P VQD ++ LKGT     +   GVNSIL       P+ L      P +  T WT
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTWT
A0A5D3CQX8 Uncharacterized protein5.3e-0544Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTW
        +NN F VQP N NPSRA+E+VEP VQD ++ LKGT     +   GVNSIL       P+ L      P +    W
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTW
A0A5D3DC35 Uncharacterized protein9.0e-0556Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
        +NN F VQP N NPSRA+E+V P VQD +  LKGT     + R GVNS+L
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSIL
A0A5D3DRY2 Gag-protease polyprotein2.3e-0852Show/hide
Query:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGL---VPK-MDTPTRM
        +NN F VQP N+NPSRA+E+V P VQD ++ LKGT     +   GVN  L  YVPS PLG+    PK  D PTR+
Subjt:  MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGL---VPK-MDTPTRM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAACCCCTCTCGGGCCAGTGAGAGGGTAGAGCCCTTTGTTCAAGACCCGGAGACACCACTTAAGGGAACACTCAT
CTACTTCCTCAAAAGTCGGGAAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCCCACTCGCATGTCTACTA
CATGGACGCTTTGGACCAATACGTCTGTATCAAATACAAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGATTAAATTCACCAATTGCTTGTGAAATAACCACGGAC
TACTGCGAACACCACCACTATGGCTACACCGGTATGACTTTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGGAGCCTTCAGGGGAATTATCTGAGAGGTCC
AACCACTAAACAGGAGTTCCTCTCGGGCCAGGAGAGGACGATGCGCCTTTGTTCAAGCCCCGGAATCAGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAACCCCTCTCGGGCCAGTGAGAGGGTAGAGCCCTTTGTTCAAGACCCGGAGACACCACTTAAGGGAACACTCAT
CTACTTCCTCAAAAGTCGGGAAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCCCACTCGCATGTCTACTA
CATGGACGCTTTGGACCAATACGTCTGTATCAAATACAAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGATTAAATTCACCAATTGCTTGTGAAATAACCACGGAC
TACTGCGAACACCACCACTATGGCTACACCGGTATGACTTTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGGAGCCTTCAGGGGAATTATCTGAGAGGTCC
AACCACTAAACAGGAGTTCCTCTCGGGCCAGGAGAGGACGATGCGCCTTTGTTCAAGCCCCGGAATCAGCCCTTAA
Protein sequenceShow/hide protein sequence
MNNLFVVQPSNRNPSRASERVEPFVQDPETPLKGTLIYFLKSREGVNSILCDYVPSSPLGLVPKMDTPTRMSTTWTLWTNTSVSNTKRVVSHSVTRIRLNSPIACEITTD
YCEHHHYGYTGMTLRLLEAGDWWESRGSLQGNYLRGPTTKQEFLSGQERTMRLCSSPGISP