; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032411 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032411
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:29582759..29583925
RNA-Seq ExpressionSpg032411
SyntenySpg032411
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]4.5e-1730.53Show/hide
Query:  FINELARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL---
        F++E A+  Y+ +  R   FE GF      + +L   +   +  H W +F   P P+N+ IV+EFY+NI  P     MVRG+S+ ++  AIN  F L   
Subjt:  FINELARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL---

Query:  --------QDFPHACFNEI----------WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR
                Q+  H  +  I          W   + +++T     L      W  F+K +L+PT+H++TVS  R+LL+ +IL   +ID G+
Subjt:  --------QDFPHACFNEI----------WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.7e-1936.04Show/hide
Query:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN+  P      VRGV V WS  AIN++F 
Subjt:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN

Query:  LQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH
        L D    H+ F E                    W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+ GR  H
Subjt:  LQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.8e-2127.67Show/hide
Query:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN+  PE     VRGV V WS  AIN++F 
Subjt:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN

Query:  LQD--FPHACF-------------------NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGT
        L D    H+ F                      W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+ GR  H   
Subjt:  LQD--FPHACF-------------------NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGT

Query:  PGWA----------------------------------------------------SVWNPSNPRAVGTSASRQ--------------------------
           A                                                    S   PS+ R    S++R                           
Subjt:  PGWA----------------------------------------------------SVWNPSNPRAVGTSASRQ--------------------------

Query:  ---EFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE
           +   +Q Q +W Y K RD  L++ALQ+NF++    FP FP E+    +     E E E D++
Subjt:  ---EFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.1e-1831.12Show/hide
Query:  IRFINELARAKYRE-------MLKRDFLFERGFDEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  FCA P+     +VREFY N+ +P+     +RGV V  S+ AIN++F+L
Subjt:  IRFINELARAKYRE-------MLKRDFLFERGFDEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL

Query:  QD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH
         D    H+ F E                    W +S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+ GR  H
Subjt:  QD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.9e-1729.17Show/hide
Query:  IVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRL
        +VREFYAN+  PE     VRGV V WS  AIN++F L D    H+ F E                    W +S     T   + L   A  W  F+K RL
Subjt:  IVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRL

Query:  LPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGTPGWA--------------------------------------------------SVWNPSNPRA
        LPTTH   VS+DR+LL+ ++L   SI+ GR  H      A                                                  S   PS+ R 
Subjt:  LPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGTPGWA--------------------------------------------------SVWNPSNPRA

Query:  VGTSASR------------------QEFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE
           S+SR                  QE   +Q Q +W Y K RD  L++ALQ+NF++    FP FP E+    +     E E E D++
Subjt:  VGTSASR------------------QEFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)8.6e-2227.67Show/hide
Query:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN+  PE     VRGV V WS  AIN++F 
Subjt:  IRFINELARAKYREMLK-RDFLFERGFDED-------LPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFN

Query:  LQD--FPHACF-------------------NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGT
        L D    H+ F                      W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+ GR  H   
Subjt:  LQD--FPHACF-------------------NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGT

Query:  PGWA----------------------------------------------------SVWNPSNPRAVGTSASRQ--------------------------
           A                                                    S   PS+ R    S++R                           
Subjt:  PGWA----------------------------------------------------SVWNPSNPRAVGTSASRQ--------------------------

Query:  ---EFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE
           +   +Q Q +W Y K RD  L++ALQ+NF++    FP FP E+    +     E E E D++
Subjt:  ---EFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE

A0A2P5DAQ2 Uncharacterized protein1.5e-1831.12Show/hide
Query:  IRFINELARAKYRE-------MLKRDFLFERGFDEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  FCA P+     +VREFY N+ +P+     +RGV V  S+ AIN++F+L
Subjt:  IRFINELARAKYRE-------MLKRDFLFERGFDEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL

Query:  QD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH
         D    H+ F E                    W +S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+ GR  H
Subjt:  QD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAH

A0A2P5DXM3 Uncharacterized protein2.9e-1729.17Show/hide
Query:  IVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRL
        +VREFYAN+  PE     VRGV V WS  AIN++F L D    H+ F E                    W +S     T   + L   A  W  F+K RL
Subjt:  IVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQD--FPHACFNE-------------------IWRLSKTEKRTFQAAYLKSEANTWLGFIKLRL

Query:  LPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGTPGWA--------------------------------------------------SVWNPSNPRA
        LPTTH   VS+DR+LL+ ++L   SI+ GR  H      A                                                  S   PS+ R 
Subjt:  LPTTHDSTVSRDRVLLIFAILRSLSIDQGRSAHGGTPGWA--------------------------------------------------SVWNPSNPRA

Query:  VGTSASR------------------QEFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE
           S+SR                  QE   +Q Q +W Y K RD  L++ALQ+NF++    FP FP E+    +     E E E D++
Subjt:  VGTSASR------------------QEFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE

A0A6A2ZUE4 Uncharacterized protein2.2e-1730.53Show/hide
Query:  FINELARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL---
        F++E A+  Y+ +  R   FE GF      + +L   +   +  H W +F   P P+N+ IV+EFY+NI  P     MVRG+S+ ++  AIN  F L   
Subjt:  FINELARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNL---

Query:  --------QDFPHACFNEI----------WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR
                Q+  H  +  I          W   + +++T     L      W  F+K +L+PT+H++TVS  R+LL+ +IL   +ID G+
Subjt:  --------QDFPHACFNEI----------WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein1.4e-1632.32Show/hide
Query:  ARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQDFPHACF
        A  +Y+ +  R   FE GF      D DL   +   +  H W +F   P  +N+ +V+EFY+NI  P     MV G+S+ ++  AIN  F LQ       
Subjt:  ARAKYREMLKRDFLFERGF------DEDLPHFLRVEIANHGWSQFCAKPDPLNSNIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQDFPHACF

Query:  NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR
           W   +  ++T     L      W  F+K +LLPT+H++TVS  R++L+ +I+  L+ID G+
Subjt:  NEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAGAGAAGAACAAGACAAAGGAGGCCGAAGAAAAAGAAAGAGAAGAAACAGAAAAGAAAGCAGCGGAAGAGACTTTGGCAAAGCATCAAGCAGACAGGGGCAA
AGGAATTGCTGAAGCATCATATGAACCAGAAGAGGAAACAGAAGGAATACCATTCATTCGCTTCATCAATGAACTTGCCCGAGCAAAATACAGAGAGATGCTAAAGAGGG
ATTTCTTATTCGAGAGAGGTTTCGATGAAGACTTACCACATTTCTTGAGGGTCGAGATCGCGAATCACGGCTGGAGTCAATTCTGTGCGAAACCAGATCCGTTGAATTCA
AACATCGTTCGAGAATTTTATGCGAATATTGATAGTCCAGAAGGATTTCAAGCCATGGTCCGAGGAGTGTCTGTTGACTGGAGCCTAGGAGCTATCAATTCTTTATTCAA
CCTCCAGGACTTCCCGCACGCATGCTTCAATGAGATATGGAGATTATCAAAGACGGAGAAGCGCACATTTCAAGCTGCCTATCTGAAGAGTGAGGCCAATACATGGTTGG
GCTTCATTAAGCTGCGCCTGCTTCCGACCACTCATGATTCAACAGTGTCTCGAGACCGAGTGCTTCTGATATTTGCAATTCTTCGATCTTTAAGTATTGATCAGGGCAGG
AGTGCCCACGGAGGCACGCCAGGGTGGGCTAGTGTGTGGAATCCATCAAATCCTAGAGCAGTTGGCACGTCGGCCAGTAGGCAAGAGTTTGCTGAGAGGCAAGCTCAAAC
TTACTGGACCTATGATAAAAGGAGAGATGACACACTTCGGAGGGCCTTGCAATCTAATTTCTCCAAACTGTATCAGGCCTTCCCTACGTTCCCCGATGAATTATTTAACC
CCTGGATTCCGCCACCGCCAGTAGAGAGAGAAGAAGAGGATGATGAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAGAGAAGAACAAGACAAAGGAGGCCGAAGAAAAAGAAAGAGAAGAAACAGAAAAGAAAGCAGCGGAAGAGACTTTGGCAAAGCATCAAGCAGACAGGGGCAA
AGGAATTGCTGAAGCATCATATGAACCAGAAGAGGAAACAGAAGGAATACCATTCATTCGCTTCATCAATGAACTTGCCCGAGCAAAATACAGAGAGATGCTAAAGAGGG
ATTTCTTATTCGAGAGAGGTTTCGATGAAGACTTACCACATTTCTTGAGGGTCGAGATCGCGAATCACGGCTGGAGTCAATTCTGTGCGAAACCAGATCCGTTGAATTCA
AACATCGTTCGAGAATTTTATGCGAATATTGATAGTCCAGAAGGATTTCAAGCCATGGTCCGAGGAGTGTCTGTTGACTGGAGCCTAGGAGCTATCAATTCTTTATTCAA
CCTCCAGGACTTCCCGCACGCATGCTTCAATGAGATATGGAGATTATCAAAGACGGAGAAGCGCACATTTCAAGCTGCCTATCTGAAGAGTGAGGCCAATACATGGTTGG
GCTTCATTAAGCTGCGCCTGCTTCCGACCACTCATGATTCAACAGTGTCTCGAGACCGAGTGCTTCTGATATTTGCAATTCTTCGATCTTTAAGTATTGATCAGGGCAGG
AGTGCCCACGGAGGCACGCCAGGGTGGGCTAGTGTGTGGAATCCATCAAATCCTAGAGCAGTTGGCACGTCGGCCAGTAGGCAAGAGTTTGCTGAGAGGCAAGCTCAAAC
TTACTGGACCTATGATAAAAGGAGAGATGACACACTTCGGAGGGCCTTGCAATCTAATTTCTCCAAACTGTATCAGGCCTTCCCTACGTTCCCCGATGAATTATTTAACC
CCTGGATTCCGCCACCGCCAGTAGAGAGAGAAGAAGAGGATGATGAAGAGTAG
Protein sequenceShow/hide protein sequence
MQEEKNKTKEAEEKEREETEKKAAEETLAKHQADRGKGIAEASYEPEEETEGIPFIRFINELARAKYREMLKRDFLFERGFDEDLPHFLRVEIANHGWSQFCAKPDPLNS
NIVREFYANIDSPEGFQAMVRGVSVDWSLGAINSLFNLQDFPHACFNEIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDQGR
SAHGGTPGWASVWNPSNPRAVGTSASRQEFAERQAQTYWTYDKRRDDTLRRALQSNFSKLYQAFPTFPDELFNPWIPPPPVEREEEDDEE