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Spg032423 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032423
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold2:31768203..31775688
RNA-Seq ExpressionSpg032423
SyntenySpg032423
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]4.7e-1564.1Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTFAESFRSSSSTWLELYIESV
        L GLSY E  KRP+GNR SLQTGELDKT                 VEIELPVPDTLPT AESFRS+S+TWLELY ES+
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTFAESFRSSSSTWLELYIESV

KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.8e-1953.33Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRGCDTKSQQQAKY
        L  LSY E  KRPRGNR SLQTG+LDKTVEIELP+PDTLPTFAESF S+SSTWLELY ES            VMSGLH VYV +  G+    +      +
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRGCDTKSQQQAKY

Query:  DDVSMLASQRLKAASSSCGG
             +  Q ++  SS  GG
Subjt:  DDVSMLASQRLKAASSSCGG

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]6.6e-1755.14Show/hide
Query:  VIPGKAHAKPAIAESVFNLATSGFLVGLSYTEEIK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWL
        VI  K +AKPAIAES  N      L GLSY EE++                       PRGNR +L TG+LDKTVEIELPVPDTLPT AES +S+SSTWL
Subjt:  VIPGKAHAKPAIAESVFNLATSGFLVGLSYTEEIK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWL

Query:  ELYIESV
        ELY ESV
Subjt:  ELYIESV

KAA0053276.1 uncharacterized protein E6C27_scaffold102G00750 [Cucumis melo var. makuwa]6.1e-1551.38Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTFAESFRSSSSTWLELYIES------------
        L+GLSY E   RPRGNR SLQTG+LDKT                            VEIELP+PDTLPTFAESF S+SSTWLELY ES            
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTFAESFRSSSSTWLELYIES------------

Query:  VMSGLHHVY
        VMSGLH V+
Subjt:  VMSGLHHVY

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]6.8e-1454.55Show/hide
Query:  VGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRG
        V +S  E ++ PRGNR SLQ G+L+KTVEIELP+PDTLPT +ES +S+SSTWLELY ES            VMS LH +YV +   +G
Subjt:  VGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRG

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein8.9e-2053.33Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRGCDTKSQQQAKY
        L  LSY E  KRPRGNR SLQTG+LDKTVEIELP+PDTLPTFAESF S+SSTWLELY ES            VMSGLH VYV +  G+    +      +
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRGCDTKSQQQAKY

Query:  DDVSMLASQRLKAASSSCGG
             +  Q ++  SS  GG
Subjt:  DDVSMLASQRLKAASSSCGG

A0A5A7UAH6 CCHC-type domain-containing protein3.2e-1755.14Show/hide
Query:  VIPGKAHAKPAIAESVFNLATSGFLVGLSYTEEIK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWL
        VI  K +AKPAIAES  N      L GLSY EE++                       PRGNR +L TG+LDKTVEIELPVPDTLPT AES +S+SSTWL
Subjt:  VIPGKAHAKPAIAESVFNLATSGFLVGLSYTEEIK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWL

Query:  ELYIESV
        ELY ESV
Subjt:  ELYIESV

A0A5A7UGD0 Uncharacterized protein3.0e-1551.38Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTFAESFRSSSSTWLELYIES------------
        L+GLSY E   RPRGNR SLQTG+LDKT                            VEIELP+PDTLPTFAESF S+SSTWLELY ES            
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTFAESFRSSSSTWLELYIES------------

Query:  VMSGLHHVY
        VMSGLH V+
Subjt:  VMSGLHHVY

A0A5A7V2F2 Uncharacterized protein3.3e-1454.55Show/hide
Query:  VGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRG
        V +S  E ++ PRGNR SLQ G+L+KTVEIELP+PDTLPT +ES +S+SSTWLELY ES            VMS LH +YV +   +G
Subjt:  VGLSYTEEIKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIES------------VMSGLHHVYVERWSGRG

A0A5D3DIM8 Uncharacterized protein2.3e-1564.1Show/hide
Query:  LVGLSYTEEIKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTFAESFRSSSSTWLELYIESV
        L GLSY E  KRP+GNR SLQTGELDKT                 VEIELPVPDTLPT AESFRS+S+TWLELY ES+
Subjt:  LVGLSYTEEIKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTFAESFRSSSSTWLELYIESV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGACCACAAATAGGTTGTTCATTAGAGGAGCACTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATA
TAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGTCCATTAGGTCCCACTGAGAATTCTCCTAAAGGCTCCCACCAGTCTCTTGCCTCTG
GTAGTCTCAGAGTCATACCAGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGTGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACACAGAAGAA
ATCAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTT
TAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTGGTCCGGGAGGGGGTGTGACACAAAATCCC
AACAACAAGCAAAATACGACGACGTCTCGATGCTAGCTTCGCAGCGTCTCAAAGCTGCGTCGAGTTCCTGCGGTGGTGCTAGGGTTTTCAAGTGGAGTAGACGGTTCGGT
TCGGTTCGGTTCAAGGGGTTGGCTCCGGTTCGTGTTGGGATGGCTTGGTTCGAATTTTTGGGAGGCCGGTTCGAGATGGTTCGGGTCGGTTCGGGTCATTTTGGTCCAGT
TCTGGAGCAGCAAAAGATTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGACCACAAATAGGTTGTTCATTAGAGGAGCACTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATA
TAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGTCCATTAGGTCCCACTGAGAATTCTCCTAAAGGCTCCCACCAGTCTCTTGCCTCTG
GTAGTCTCAGAGTCATACCAGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGTGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACACAGAAGAA
ATCAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTT
TAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTGGTCCGGGAGGGGGTGTGACACAAAATCCC
AACAACAAGCAAAATACGACGACGTCTCGATGCTAGCTTCGCAGCGTCTCAAAGCTGCGTCGAGTTCCTGCGGTGGTGCTAGGGTTTTCAAGTGGAGTAGACGGTTCGGT
TCGGTTCGGTTCAAGGGGTTGGCTCCGGTTCGTGTTGGGATGGCTTGGTTCGAATTTTTGGGAGGCCGGTTCGAGATGGTTCGGGTCGGTTCGGGTCATTTTGGTCCAGT
TCTGGAGCAGCAAAAGATTTATTAG
Protein sequenceShow/hide protein sequence
MVGPQIGCSLEEHCSLISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGPLGPTENSPKGSHQSLASGSLRVIPGKAHAKPAIAESVFNLATSGFLVGLSYTEE
IKRPRGNRSSLQTGELDKTVEIELPVPDTLPTFAESFRSSSSTWLELYIESVMSGLHHVYVERWSGRGCDTKSQQQAKYDDVSMLASQRLKAASSSCGGARVFKWSRRFG
SVRFKGLAPVRVGMAWFEFLGGRFEMVRVGSGHFGPVLEQQKIY