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Spg032449 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032449
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold2:32391782..32397998
RNA-Seq ExpressionSpg032449
SyntenySpg032449
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]1.3e-0642.57Show/hide
Query:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLS
        LL +L +    +A VEIEL VPD LP SA+SF       ++L         LF K S VRAA +VC +G    +  DDVCWLH + R K+AG   G V  
Subjt:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLS

Query:  K
        +
Subjt:  K

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]3.1e-0544.3Show/hide
Query:  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDVCWLHAISRTKLAGNSTGEV
        +EIEL VPD LP SA+S             +LF K S VR A  +C + +   +  E+DVCWLHA+ R K+AG S G V
Subjt:  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDVCWLHAISRTKLAGNSTGEV

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-0644.57Show/hide
Query:  SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG
        +A VEIEL VPD LP SA+ F       ++L         LF K S VRAA +VC +G    +  DDVCWLHA+ R K AG   G V    G
Subjt:  SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG

TYK11725.1 uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa]1.7e-0645.88Show/hide
Query:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVL
        LL +L +     A VEIEL VPD LP           LF K S VRAA +VC +G    +  DDVCWLHA+ R K+AG   G V+
Subjt:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVL

TYK27281.1 uncharacterized protein E5676_scaffold244G00490 [Cucumis melo var. makuwa]4.7e-0958.82Show/hide
Query:  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTG
        VEIEL VPD LPK    FRIKLQLF K S V+AA +VC +G    +  DDVCWLHA+ R K AG   G
Subjt:  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTG

TrEMBL top hitse value%identityAlignment
A0A5A7VIY9 Uncharacterized protein6.2e-0742.57Show/hide
Query:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLS
        LL +L +    +A VEIEL VPD LP SA+SF       ++L         LF K S VRAA +VC +G    +  DDVCWLH + R K+AG   G V  
Subjt:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLS

Query:  K
        +
Subjt:  K

A0A5D3CAC6 Uncharacterized protein1.5e-0544.3Show/hide
Query:  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDVCWLHAISRTKLAGNSTGEV
        +EIEL VPD LP SA+S             +LF K S VR A  +C + +   +  E+DVCWLHA+ R K+AG S G V
Subjt:  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDVCWLHAISRTKLAGNSTGEV

A0A5D3CCC7 DNA/RNA polymerases superfamily protein8.1e-0744.57Show/hide
Query:  SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG
        +A VEIEL VPD LP SA+ F       ++L         LF K S VRAA +VC +G    +  DDVCWLHA+ R K AG   G V    G
Subjt:  SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG

A0A5D3CJL4 Retrotrans_gag domain-containing protein8.1e-0745.88Show/hide
Query:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVL
        LL +L +     A VEIEL VPD LP           LF K S VRAA +VC +G    +  DDVCWLHA+ R K+AG   G V+
Subjt:  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVL

A0A5D3DUB7 Uncharacterized protein2.3e-0958.82Show/hide
Query:  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTG
        VEIEL VPD LPK    FRIKLQLF K S V+AA +VC +G    +  DDVCWLHA+ R K AG   G
Subjt:  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCAATCCCTTCAATTGGGGTTGGCTACGGTTCGTGCTGGGATGGCTTGGTTCGAGTTTTTTGGAGGCTGGTTCGAGATGGTTCGGGTCGGTTCGGGTCAGGA
AAACAGAGCACAAATTTTTCGTGCAAATCTGAAGGGTCTCTTGTTTTCTCTAGTTTTGCGAACGTTCCGGAGTGCACAGGTAGAGATCGAGCTCCAGGTGCCTGATAAAC
TGCCAAAGTCTGCTAAAAGCTTCCGGATCAAGCTCCAGTTATTTACTAAACTTAGTTATGTCAGGGCTGCACTTCATGTATGTCTAAAGGGTCAACAGGTATCGTTAGAG
GAGGACGATGTCTGTTGGCTTCACGCCATCTCCCGAACTAAGCTAGCAGGGAACTCTACCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCGGTGAAGTTCTGTC
TAAGGCTGGAGGGAACTCTCCCACTGAAGTTCTATCTAAGGCTGGAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAG
TCTTGAAGAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCCAATCCCTTCAATTGGGGTTGGCTACGGTTCGTGCTGGGATGGCTTGGTTCGAGTTTTTTGGAGGCTGGTTCGAGATGGTTCGGGTCGGTTCGGGTCAGGA
AAACAGAGCACAAATTTTTCGTGCAAATCTGAAGGGTCTCTTGTTTTCTCTAGTTTTGCGAACGTTCCGGAGTGCACAGGTAGAGATCGAGCTCCAGGTGCCTGATAAAC
TGCCAAAGTCTGCTAAAAGCTTCCGGATCAAGCTCCAGTTATTTACTAAACTTAGTTATGTCAGGGCTGCACTTCATGTATGTCTAAAGGGTCAACAGGTATCGTTAGAG
GAGGACGATGTCTGTTGGCTTCACGCCATCTCCCGAACTAAGCTAGCAGGGAACTCTACCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCGGTGAAGTTCTGTC
TAAGGCTGGAGGGAACTCTCCCACTGAAGTTCTATCTAAGGCTGGAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAG
TCTTGAAGAGTATTTGA
Protein sequenceShow/hide protein sequence
MEFQSLQLGLATVRAGMAWFEFFGGWFEMVRVGSGQENRAQIFRANLKGLLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLE
EDDVCWLHAISRTKLAGNSTGEVLSKAGGNSPGEVLSKAGGNSPTEVLSKAGGLLKSSSLEGSSVFKKSWGLEVLKSI