; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032458 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032458
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationscaffold2:29863576..29872173
RNA-Seq ExpressionSpg032458
SyntenySpg032458
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021603.1 hypothetical protein SDJN02_15329 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-0994.44Show/hide
Query:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        MIGNSRKWAYIRII+GTIVGGVLGFYVMHRVEL YK
Subjt:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
KAG7023244.1 hypothetical protein SDJN02_14269, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1171.7Show/hide
Query:  VPASIENLRKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        +P  +   RK SCEI KM+G+SR WAY RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  VPASIENLRKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
XP_008453375.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]9.2e-1282.22Show/hide
Query:  RKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        R  SCE GKM+G+SRKWAY RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  RKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
XP_022987318.1 uncharacterized protein LOC111484905 [Cucurbita maxima]1.6e-1181.25Show/hide
Query:  NLRKE-SCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        NLR+E SCEI KM+G+SR WAY+RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  NLRKE-SCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]7.3e-0991.67Show/hide
Query:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        MIG+SRKWAY+RII+GTIVGGVLGFYVMHRVELGYK
Subjt:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
TrEMBL top hitse value%identityAlignment
A0A0A0LPI8 Uncharacterized protein6.0e-0986.11Show/hide
Query:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        M+G+SRKWAYIRII+GT+VGGVLGFYVMHRVE+GYK
Subjt:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
A0A1S3BW37 uncharacterized protein LOC1034941134.5e-1282.22Show/hide
Query:  RKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        R  SCE GKM+G+SRKWAY RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  RKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 11.8e-0886.11Show/hide
Query:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        M+G+SRKWAY RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
A0A6J1BYI4 uncharacterized protein LOC1110068987.9e-0986.11Show/hide
Query:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        M+GN RKWAY+RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  MIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
A0A6J1JJ44 uncharacterized protein LOC1114849057.6e-1281.25Show/hide
Query:  NLRKE-SCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        NLR+E SCEI KM+G+SR WAY+RII+GTIVGGVLGFYVMHRVE+GYK
Subjt:  NLRKE-SCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein7.3e-0763.64Show/hide
Query:  NSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK
        +S  W Y RII+GT++GG LGFYVMHR+E+ YK
Subjt:  NSRKWAYIRIISGTIVGGVLGFYVMHRVELGYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGATCGCGCCGCCGCCGCCCAGCTCGCGCCGTCGGTTTCCCTGTCCATCTGCCGCCGCATTCCCTCTGTTCGTGGGTTTCGTGGTTCAAGCTCTCTTCCTCTTCCGTT
TTCAGCAAGAAAACCTCGTGGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCCTGGAAGC
TCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAGAGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGG
ATCATCAGCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCT
GCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGACATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTC
AACTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAG
AGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGGATCATCAACGGCACCGTCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGT
TGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGA
CATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTCAACTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTC
GTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAGAGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGGAT
CATCAGCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGC
GTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGACATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTCAA
CTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGTCTCGGGCCGAATCGGGTC
GTCAAACCATGTCCGAATCCATGTCCACAGTTCACTAGCGCTTTTCATTCTCCCCGGAAGCTTTCTGCAGAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
TCTGATCGCGCCGCCGCCGCCCAGCTCGCGCCGTCGGTTTCCCTGTCCATCTGCCGCCGCATTCCCTCTGTTCGTGGGTTTCGTGGTTCAAGCTCTCTTCCTCTTCCGTT
TTCAGCAAGAAAACCTCGTGGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCCTGGAAGC
TCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAGAGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGG
ATCATCAGCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCT
GCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGACATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTC
AACTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAG
AGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGGATCATCAACGGCACCGTCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGT
TGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGCGTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGA
CATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTCAACTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTC
GTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGAAAATCTAAGGAAAGAGAGCTGTGAGATTGGGAAGATGATAGGCAATTCTCGTAAATGGGCTTATATTCGGAT
CATCAGCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGTTCTTGCGCGGACAGCAGCTCGAAGCACCGTCTCCTCTGC
GTTTCAGAGTTAAAAATCATGGCGCCGTCTTTGCTCAGTTCGTGAGTGGTTCGACATCAATTAGTGTTTCCGCGCCGTCTAAGTGTTCGACTGAGTTCGAAACATTTCAA
CTTGAACACCACTGCCCAAGGAGCGTTCTGAATTGCTGGTTGTGCTGGAAGCTCGTTTTGGAGTTAGATTGTGCAGTTCCAGCTAGCATTGTCTCGGGCCGAATCGGGTC
GTCAAACCATGTCCGAATCCATGTCCACAGTTCACTAGCGCTTTTCATTCTCCCCGGAAGCTTTCTGCAGAAAATCTAA
Protein sequenceShow/hide protein sequence
SDRAAAAQLAPSVSLSICRRIPSVRGFRGSSSLPLPFSARKPRGSCADSSSKHRLLCVSELKIMAPSLLSSWKLVLELDCAVPASIENLRKESCEIGKMIGNSRKWAYIR
IISGTIVGGVLGFYVMHRVELGYKFLRGQQLEAPSPLRFRVKNHGAVFAQFVSGSTSISVSAPSKCSTEFETFQLEHHCPRSVLNCWLCWKLVLELDCAVPASIENLRKE
SCEIGKMIGNSRKWAYIRIINGTVVGGVLGFYVMHRVELGYKFLRGQQLEAPSPLRFRVKNHGAVFAQFVSGSTSISVSAPSKCSTEFETFQLEHHCPRSVLNCWLCWKL
VLELDCAVPASIENLRKESCEIGKMIGNSRKWAYIRIISGTIVGGVLGFYVMHRVELGYKFLRGQQLEAPSPLRFRVKNHGAVFAQFVSGSTSISVSAPSKCSTEFETFQ
LEHHCPRSVLNCWLCWKLVLELDCAVPASIVSGRIGSSNHVRIHVHSSLALFILPGSFLQKI