; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032472 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032472
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor MYB34
Genome locationscaffold2:29591085..29595001
RNA-Seq ExpressionSpg032472
SyntenySpg032472
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]1.6e-0556Show/hide
Query:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV
        +  Q  NPI + +DR R IR YA P+F  LNPGI+ P I APQFELK V+
Subjt:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV

XP_017617646.1 PREDICTED: uncharacterized protein LOC108462175 [Gossypium arboreum]5.1e-0747.89Show/hide
Query:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIGFYEIKIGEIATLSRL
        NPI +V+DR+R IR Y +P+F  LNPGI  P I+APQFELKLV+ F  L+ V +      ++ EI  +  L
Subjt:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIGFYEIKIGEIATLSRL

XP_030483354.1 uncharacterized protein LOC115699947 [Cannabis sativa]2.5e-0654.9Show/hide
Query:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVG
        + PQ  NPI + +DR R I+ YA P+F  LNPGI+ P I APQFELK + G
Subjt:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVG

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]9.6e-0651.72Show/hide
Query:  QENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG
        + NPI + +DR R IR YA P+F  LNPGI+ P I AP FELK V+ F  L+ V + G
Subjt:  QENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]1.6e-0539.8Show/hide
Query:  MEPPRVDPQVDP--QNRRREQNGGRIP------PVPLVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG
        +E   +DP+++   + RR+EQ   +         V  V  + NPI + +DR R IR YA P+F  LNPGI+ P I AP FELK V+ F  L+ V + G
Subjt:  MEPPRVDPQVDP--QNRRREQNGGRIP------PVPLVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG

TrEMBL top hitse value%identityAlignment
A0A2P5A9Q1 Uncharacterized protein1.0e-0542.5Show/hide
Query:  VDPQVDP--QNRRREQNGG--RIPPVPLVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFY
        +DP+V+   + RRREQ  G   +  +      +N   + +DR+R IR YA+P+   LNPGI+ P I APQFELK V+  Y
Subjt:  VDPQVDP--QNRRREQNGG--RIPPVPLVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFY

A0A5B6U8V7 Transcription factor MYB343.9e-0554.55Show/hide
Query:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV
        N I + ++R+R IR Y+LP+F  LNPGI+ P I+AP+FELK+V+
Subjt:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV

A0A6P4MQY3 uncharacterized protein LOC1084621752.5e-0747.89Show/hide
Query:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIGFYEIKIGEIATLSRL
        NPI +V+DR+R IR Y +P+F  LNPGI  P I+APQFELKLV+ F  L+ V +      ++ EI  +  L
Subjt:  NPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIGFYEIKIGEIATLSRL

U5CUI2 Retrotrans_gag domain-containing protein7.9e-0656Show/hide
Query:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV
        +  Q  NPI + +DR R IR YA P+F  LNPGI+ P I APQFELK V+
Subjt:  LVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVV

U5CUK7 Uncharacterized protein6.7e-0550Show/hide
Query:  QENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG
        + NPI + +DR R IR YA P+F  LN GI+ P I AP FELK V+ F  L+ V + G
Subjt:  QENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCCTAGAGTCGATCCTCAAGTTGACCCACAGAATCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCACTGGTGCCACAACAAGAAAATCCAAT
CTATATTGTTGAAGACCGCAATAGAGTAATAAGGCACTATGCTTTACCTGTTTTTCAGACTTTAAATCCAGGAATTTTGGAGCCACCGATAGATGCTCCACAATTTGAAC
TTAAACTAGTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGAATAGGTTTTTATGAGATAAAAATCGGAGAAATTGCGACGCTGTCACGATTACAGCACGCGTTAGAA
ATTCGCAACAGGACGGTTCAAGGCTGTTGGGCGGTCCGATTCATGCGGTCTGGCTGGGCTGGGACCAATTTGTTCCTGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTT
CGTAGCTGGTTCGAAGTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTCCTAGAGTCGATCCTCAAGTTGACCCACAGAATCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCACTGGTGCCACAACAAGAAAATCCAAT
CTATATTGTTGAAGACCGCAATAGAGTAATAAGGCACTATGCTTTACCTGTTTTTCAGACTTTAAATCCAGGAATTTTGGAGCCACCGATAGATGCTCCACAATTTGAAC
TTAAACTAGTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGAATAGGTTTTTATGAGATAAAAATCGGAGAAATTGCGACGCTGTCACGATTACAGCACGCGTTAGAA
ATTCGCAACAGGACGGTTCAAGGCTGTTGGGCGGTCCGATTCATGCGGTCTGGCTGGGCTGGGACCAATTTGTTCCTGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTT
CGTAGCTGGTTCGAAGTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAA
Protein sequenceShow/hide protein sequence
MEPPRVDPQVDPQNRRREQNGGRIPPVPLVPQQENPIYIVEDRNRVIRHYALPVFQTLNPGILEPPIDAPQFELKLVVGFYALKLVDRIGFYEIKIGEIATLSRLQHALE
IRNRTVQGCWAVRFMRSGWAGTNLFLFSWNLARFVIFVAGSKWFGRSRPVFGAAEGL