; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032492 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032492
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:31608942..31610641
RNA-Seq ExpressionSpg032492
SyntenySpg032492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.3e-0833.33Show/hide
Query:  CFINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQ
        CF++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ +V+EFY+NI +  +   +VRG+ + ++P AIN  F LQ
Subjt:  CFINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.3e-0839.52Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF
        K +A  + KA   ETE     Y   I N           R    E+GF  D       LP F+   I  H W QFCA PE     +VREFYAN+ D  E 
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF

Query:  QAIVRGVPVDWSPGAINSLFDLQD
           VRGV V WS  AIN++F L D
Subjt:  QAIVRGVPVDWSPGAINSLFDLQD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-0940.32Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF
        K +A  + KA   ETE     Y   I N           R    E+GF  D       LP F+   I  H W QFCA PE     +VREFYAN+ D EE 
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF

Query:  QAIVRGVPVDWSPGAINSLFDLQD
           VRGV V WS  AIN++F L D
Subjt:  QAIVRGVPVDWSPGAINSLFDLQD

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]9.9e-0938.46Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGV
        K +A  + KA   ETEE    Y   I      K     ++ FL           F+   I  H W QFCA PE     +VREFYAN+ D EE    VRGV
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGV

Query:  PVDWSPGAINSLFDLQD
         V W+  AIN++F L D
Subjt:  PVDWSPGAINSLFDLQD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]7.6e-0941.07Show/hide
Query:  FINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQD
        F +  A A+Y E +K   L  E+GF  +       P F+   I  H W  FCA  E     +VREFYAN+ D EE    V+GV V WS  AIN+LF L D
Subjt:  FINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQD

Query:  FL--HAGFNEMV
         +  H+ F E V
Subjt:  FL--HAGFNEMV

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.2e-0939.52Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF
        K +A  + KA   ETE     Y   I N           R    E+GF  D       LP F+   I  H W QFCA PE     +VREFYAN+ D  E 
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF

Query:  QAIVRGVPVDWSPGAINSLFDLQD
           VRGV V WS  AIN++F L D
Subjt:  QAIVRGVPVDWSPGAINSLFDLQD

A0A2P5BCG4 Uncharacterized protein (Fragment)9.6e-1040.32Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF
        K +A  + KA   ETE     Y   I N           R    E+GF  D       LP F+   I  H W QFCA PE     +VREFYAN+ D EE 
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDD-------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEF

Query:  QAIVRGVPVDWSPGAINSLFDLQD
           VRGV V WS  AIN++F L D
Subjt:  QAIVRGVPVDWSPGAINSLFDLQD

A0A2P5EK98 Uncharacterized protein (Fragment)4.8e-0938.46Show/hide
Query:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGV
        K +A  + KA   ETEE    Y   I      K     ++ FL           F+   I  H W QFCA PE     +VREFYAN+ D EE    VRGV
Subjt:  KGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGV

Query:  PVDWSPGAINSLFDLQD
         V W+  AIN++F L D
Subjt:  PVDWSPGAINSLFDLQD

A0A2P5EYL5 Uncharacterized protein3.7e-0941.07Show/hide
Query:  FINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQD
        F +  A A+Y E +K   L  E+GF  +       P F+   I  H W  FCA  E     +VREFYAN+ D EE    V+GV V WS  AIN+LF L D
Subjt:  FINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQD

Query:  FL--HAGFNEMV
         +  H+ F E V
Subjt:  FL--HAGFNEMV

A0A6A2ZUE4 Uncharacterized protein6.2e-0933.33Show/hide
Query:  CFINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQ
        CF++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ +V+EFY+NI +  +   +VRG+ + ++P AIN  F LQ
Subjt:  CFINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCACTGTTCGATTGGTCCACGTTATCCACGTCATCAGCCACGTCACCTTCCACGTCATCGCCACATCAGCAAAAGTGACCGTTGGGAGTGCCACGTCAGCTGCCA
CGTCACCAGTTTTGATCGTTCTACGTGCCACGTCAGCGCCACCTCATCAGCTTGCCACGTGTCATGCCACGTAGTTGAAGATATTGCTGATGTTGTGGTTGTGGAGGAAA
ATCCGAAGGAACTAGAGGAACAAAACCCTAGACAGCCTGAGCCGACAGTCGGAAATCCGCAAGAAGTTCAAGAAAAACAAGCAGAGGATGTGCCAGAGGGAGGAATTCCA
CAAGGAGTTCAAGAGCAAGAAACTCAGGTCGAGGTTATTATGCCGGAGAAAGAAAATACGGAAAAAGAAGAGCGGGAGAAAAAAGATGCAGAAGATAGAGCGAGAGAAGA
AACAGAAAAGAAAATGGAGAAGGAAATTTTGCTCAAACAGAGGGAAGACGAGCGCAAGGGTATTGCTGAAGCATCGGCTAAAGCTGAAGATATCGAAACTGAGGAGCCAT
GGTTGCCGTACAACTGCTTCATCAATAATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGAGACTTTTTGTTTGAACGAGGATTTGGTGATGATCTACCGCGTTTC
TTGAGAACAGGAATAGCAAACCATGGTTGGAGTCAGTTCTGCGCAAAGCCGGAGCCGGTCAATTCCAATGTTGTCCGTGAATTTTATGCAAATATCGATGATCAAGAAGA
ATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTGGAGCCCAGGAGCTATCAATTCTTTATTCGACCTCCAAGATTTTCTGCACGCGGGATTCAATGAGATGGTGGTAG
CACCATCTAATGATCAGTTAAATGCGGCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCACTGTTCGATTGGTCCACGTTATCCACGTCATCAGCCACGTCACCTTCCACGTCATCGCCACATCAGCAAAAGTGACCGTTGGGAGTGCCACGTCAGCTGCCA
CGTCACCAGTTTTGATCGTTCTACGTGCCACGTCAGCGCCACCTCATCAGCTTGCCACGTGTCATGCCACGTAGTTGAAGATATTGCTGATGTTGTGGTTGTGGAGGAAA
ATCCGAAGGAACTAGAGGAACAAAACCCTAGACAGCCTGAGCCGACAGTCGGAAATCCGCAAGAAGTTCAAGAAAAACAAGCAGAGGATGTGCCAGAGGGAGGAATTCCA
CAAGGAGTTCAAGAGCAAGAAACTCAGGTCGAGGTTATTATGCCGGAGAAAGAAAATACGGAAAAAGAAGAGCGGGAGAAAAAAGATGCAGAAGATAGAGCGAGAGAAGA
AACAGAAAAGAAAATGGAGAAGGAAATTTTGCTCAAACAGAGGGAAGACGAGCGCAAGGGTATTGCTGAAGCATCGGCTAAAGCTGAAGATATCGAAACTGAGGAGCCAT
GGTTGCCGTACAACTGCTTCATCAATAATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGAGACTTTTTGTTTGAACGAGGATTTGGTGATGATCTACCGCGTTTC
TTGAGAACAGGAATAGCAAACCATGGTTGGAGTCAGTTCTGCGCAAAGCCGGAGCCGGTCAATTCCAATGTTGTCCGTGAATTTTATGCAAATATCGATGATCAAGAAGA
ATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTGGAGCCCAGGAGCTATCAATTCTTTATTCGACCTCCAAGATTTTCTGCACGCGGGATTCAATGAGATGGTGGTAG
CACCATCTAATGATCAGTTAAATGCGGCTGTCTAA
Protein sequenceShow/hide protein sequence
MCHCSIGPRYPRHQPRHLPRHRHISKSDRWECHVSCHVTSFDRSTCHVSATSSACHVSCHVVEDIADVVVVEENPKELEEQNPRQPEPTVGNPQEVQEKQAEDVPEGGIP
QGVQEQETQVEVIMPEKENTEKEEREKKDAEDRAREETEKKMEKEILLKQREDERKGIAEASAKAEDIETEEPWLPYNCFINNLARAKYIEMLKRDFLFERGFGDDLPRF
LRTGIANHGWSQFCAKPEPVNSNVVREFYANIDDQEEFQAIVRGVPVDWSPGAINSLFDLQDFLHAGFNEMVVAPSNDQLNAAV