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Spg032511 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032511
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:31606495..31608803
RNA-Seq ExpressionSpg032511
SyntenySpg032511
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0756372.1 hypothetical protein [Gossypium gossypioides]1.1e-0642.86Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL
        +S  R+LL++ I+   SI+VGKII  +IYDC RKK G ++FP+ +T LC RA V    +   L  +G I   +L  L
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.1e-0745.12Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARLQRTQE
        VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1130.37Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------
        VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+                       
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------

Query:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
                           Q  Q+     L+   H          + RD AL++ALQ+NF++P P FP FP ++L    L    E E D++
Subjt:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.5e-1130.89Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------
        VS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+                       
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------

Query:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
                           Q  Q+     L+   H          + RD AL++ALQ+NF++P P FP FP +LL    L    E E D++
Subjt:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.9e-1132.6Show/hide
Query:  MVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL------QRTQE-----------
        +VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+      + TQ+           
Subjt:  MVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL------QRTQE-----------

Query:  ARQGGLVCD------------------------IHQIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
        +R  G V                            + RD AL++ALQ+NF++P P FP FP ++L    L    E E D++
Subjt:  ARQGGLVCD------------------------IHQIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.5e-0745.12Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARLQRTQE
        VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-1130.37Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------
        VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+                       
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------

Query:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
                           Q  Q+     L+   H          + RD AL++ALQ+NF++P P FP FP ++L    L    E E D++
Subjt:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

A0A2P5CEY2 Uncharacterized protein7.5e-1230.89Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------
        VS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+                       
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL-----------------------

Query:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
                           Q  Q+     L+   H          + RD AL++ALQ+NF++P P FP FP +LL    L    E E D++
Subjt:  -------------------QRTQEARQGGLVCDIH----------QIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

A0A2P5DXM3 Uncharacterized protein2.8e-1132.6Show/hide
Query:  MVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL------QRTQE-----------
        +VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+      + TQ+           
Subjt:  MVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL------QRTQE-----------

Query:  ARQGGLVCD------------------------IHQIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE
        +R  G V                            + RD AL++ALQ+NF++P P FP FP ++L    L    E E D++
Subjt:  ARQGGLVCD------------------------IHQIRDVALRRALQSNFSKPYPAFPIFPDDLLNPWILPPPVEREGDEE

A0A7J9D6N4 Uncharacterized protein5.6e-0742.86Show/hide
Query:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL
        +S  R+LL++ I+   SI+VGKII  +IYDC RKK G ++FP+ +T LC RA V    +   L  +G I   +L  L
Subjt:  VSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTCGAGATCGGGTACTTCTTGTGTTTGCTATTCTTCGTTCCATGAGCATTGATGTGGGCAAAATAATTTCTAGTGAAATCTATGATTGCTGGCGGAAGAAGGT
AGGGAAGTTGTTTTTCCCTAACACCATAACGATGTTATGCCAAAGGGCAGGGGTTCCAATGAATACGGATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAA
ACCTGGCTAGGCTTCAAAGGACACAAGAAGCACGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATAAGGGATGTCGCGTTGAGGAGGGCCTTGCAATCTAATTTTTCT
AAACCATATCCAGCCTTCCCAATATTCCCTGATGACCTATTGAACCCTTGGATTCTGCCACCGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGCATATCTTCT
AGCCTGGTCGTTGCTGAGGCAAGAAGATTCTGAGGTAGTGTTGACTTATGTGATCCACTTTAAGCTTACGATTGAGTTAAATGTGGTGATCATTTGTCCATGGCGGAAGA
ATTATTTTGCTGCAACAGCACTTGGTTTTGCAGAATGCTCAGTTATGGATGCACTTGCTCAGATTGTGGCGTGTGTTATGAACCTTATGAGCAAAATTTACTTAGGTGTT
GATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTCGAGATCGGGTACTTCTTGTGTTTGCTATTCTTCGTTCCATGAGCATTGATGTGGGCAAAATAATTTCTAGTGAAATCTATGATTGCTGGCGGAAGAAGGT
AGGGAAGTTGTTTTTCCCTAACACCATAACGATGTTATGCCAAAGGGCAGGGGTTCCAATGAATACGGATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAA
ACCTGGCTAGGCTTCAAAGGACACAAGAAGCACGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATAAGGGATGTCGCGTTGAGGAGGGCCTTGCAATCTAATTTTTCT
AAACCATATCCAGCCTTCCCAATATTCCCTGATGACCTATTGAACCCTTGGATTCTGCCACCGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGCATATCTTCT
AGCCTGGTCGTTGCTGAGGCAAGAAGATTCTGAGGTAGTGTTGACTTATGTGATCCACTTTAAGCTTACGATTGAGTTAAATGTGGTGATCATTTGTCCATGGCGGAAGA
ATTATTTTGCTGCAACAGCACTTGGTTTTGCAGAATGCTCAGTTATGGATGCACTTGCTCAGATTGTGGCGTGTGTTATGAACCTTATGAGCAAAATTTACTTAGGTGTT
GATTAG
Protein sequenceShow/hide protein sequence
MVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPMNTDDVTLMDKGIIDTPNLARLQRTQEARQGGLVCDIHQIRDVALRRALQSNFS
KPYPAFPIFPDDLLNPWILPPPVEREGDEEEDPAYLLAWSLLRQEDSEVVLTYVIHFKLTIELNVVIICPWRKNYFAATALGFAECSVMDALAQIVACVMNLMSKIYLGV
D