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Spg032530 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032530
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold2:32541186..32545632
RNA-Seq ExpressionSpg032530
SyntenySpg032530
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]3.4e-1045.45Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVIL
        F+K +L+PT+H++TVS  R+L++ +I+ S  IDVG+I    +H+C  KK   L FPN IT LC +  V  +A D IL
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.3e-1142.86Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K  LLPTTH  TVS DR+L++ ++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L + G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1143.96Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K RLLPTTH  TVS DR+L++ ++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L + G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.1e-1143.96Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K RLLPTTH  TVS DR+L+++++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L   G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]2.6e-1045.83Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSA
        F++   +P +H  T+S +R+L+++AIL   SI+VGKI   +IHNC +KK G ++FP+ IT LC +A V T A
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSA

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.6e-1142.86Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K  LLPTTH  TVS DR+L++ ++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L + G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

A0A2P5BCG4 Uncharacterized protein (Fragment)6.8e-1243.96Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K RLLPTTH  TVS DR+L++ ++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L + G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

A0A2P5CEY2 Uncharacterized protein5.2e-1243.96Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL
        F+K RLLPTTH  TVS DR+L+++++L   SI+VG++  S+I  C  +K G LFFP+ IT LC  A  P    +  L   G +D   +AR+
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARL

A0A5D2MA47 Uncharacterized protein1.3e-1045.83Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSA
        F++   +P +H  T+S +R+L+++AIL   SI+VGKI   +IHNC +KK G ++FP+ IT LC +A V T A
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSA

A0A6A2Y697 Reverse transcriptase domain-containing protein1.7e-1045.45Show/hide
Query:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVIL
        F+K +L+PT+H++TVS  R+L++ +I+ S  IDVG+I    +H+C  KK   L FPN IT LC +  V  +A D IL
Subjt:  FIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTATCAAAGAGAGGCTACTTCCAACGACTCATGACTCCACTGTTTCTTGGGACAGAGTTCTTATGGTTTTTGCAATTTTGAGATCTCTAAGTATTGACGTCGG
CAAGATTTTCTCCAGTGATATTCATAATTGCTGGAGGAAAAAGGTGGGCAAATTGTTTTTCCCCAACACAATCACGATGTTATGTGAAAGGGCAGGGGTTCCCACGAGCG
CTGAAGATGTCATTCTGATGGACAAAGGGATAATGGACACACCAAACATGGCAAGGCTACAAAGGACGCATGAAGCTCGTCAAGGTGGATTGGTGTGTGACATCCACAAC
ATCCAAGAACAACTTCAATTGCATTCCAGTCGAATGGAGTTTGCCGAGAGGCAATTCCAGACTCTGGTCATCGTTGCAGCAATAAGTTTTGAGGTAAGCTTCATCATAAC
ATGTCAGCATTCTGAGAAGCAAGGGATACGCCATTATGTGTTGGTGAACGCTAGTGACTTAGTTGAGTTGAGCGCACGGGAACATCTTGAAGAAGCTGCTTATATTCAAG
AACTTCCAATGGACCAACCTGGAGTCGATCCTCCTGTTGACCAACAGAATCGTGGAATGGACCAGAATGGTGGGAGAATACCTCTAGCACCACCAGTTCCTCCGGTGCCA
CAAAATGAAAATCTGATCTATATTGCAAAAGATCGTTCTGCTACAGCAACTGATTTCACAAGCAGAAGGCCAAAAGTCTGGAATTTAAGTGACTGCACGTGCTGTACCCA
TGGGAATTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTATCAAAGAGAGGCTACTTCCAACGACTCATGACTCCACTGTTTCTTGGGACAGAGTTCTTATGGTTTTTGCAATTTTGAGATCTCTAAGTATTGACGTCGG
CAAGATTTTCTCCAGTGATATTCATAATTGCTGGAGGAAAAAGGTGGGCAAATTGTTTTTCCCCAACACAATCACGATGTTATGTGAAAGGGCAGGGGTTCCCACGAGCG
CTGAAGATGTCATTCTGATGGACAAAGGGATAATGGACACACCAAACATGGCAAGGCTACAAAGGACGCATGAAGCTCGTCAAGGTGGATTGGTGTGTGACATCCACAAC
ATCCAAGAACAACTTCAATTGCATTCCAGTCGAATGGAGTTTGCCGAGAGGCAATTCCAGACTCTGGTCATCGTTGCAGCAATAAGTTTTGAGGTAAGCTTCATCATAAC
ATGTCAGCATTCTGAGAAGCAAGGGATACGCCATTATGTGTTGGTGAACGCTAGTGACTTAGTTGAGTTGAGCGCACGGGAACATCTTGAAGAAGCTGCTTATATTCAAG
AACTTCCAATGGACCAACCTGGAGTCGATCCTCCTGTTGACCAACAGAATCGTGGAATGGACCAGAATGGTGGGAGAATACCTCTAGCACCACCAGTTCCTCCGGTGCCA
CAAAATGAAAATCTGATCTATATTGCAAAAGATCGTTCTGCTACAGCAACTGATTTCACAAGCAGAAGGCCAAAAGTCTGGAATTTAAGTGACTGCACGTGCTGTACCCA
TGGGAATTTTCAATAA
Protein sequenceShow/hide protein sequence
MGFIKERLLPTTHDSTVSWDRVLMVFAILRSLSIDVGKIFSSDIHNCWRKKVGKLFFPNTITMLCERAGVPTSAEDVILMDKGIMDTPNMARLQRTHEARQGGLVCDIHN
IQEQLQLHSSRMEFAERQFQTLVIVAAISFEVSFIITCQHSEKQGIRHYVLVNASDLVELSAREHLEEAAYIQELPMDQPGVDPPVDQQNRGMDQNGGRIPLAPPVPPVP
QNENLIYIAKDRSATATDFTSRRPKVWNLSDCTCCTHGNFQ