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Spg032539 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032539
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:23268311..23268883
RNA-Seq ExpressionSpg032539
SyntenySpg032539
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW36182.1 putative ribonuclease H protein [Vitis vinifera]1.2e-1435.43Show/hide
Query:  PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITL
        P + LG PLG NH    +WD + E+ +  L  W R  +SKG R+TL +  ++S+PIY +SLL   + ++  +EKI  DF+W GG  +   +LV W+ + +
Subjt:  PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITL

Query:  PTSLGRLIYDVNSHGWMTDEIRKKKGM
            G L +     GW + E+R+  G+
Subjt:  PTSLGRLIYDVNSHGWMTDEIRKKKGM

RVW84593.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.3e-1536.62Show/hide
Query:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP
        +A  FGC     P T LG PLG    +  +WD + E+ +  L  W R  LSKG R TL +  +++LPIY +SLL    ++ + +EKI  DF+W GG  + 
Subjt:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP

Query:  ICNLVKWEWITLPTSLGRLI---YDVNSHGWMTDEIRKKKGM
          +LV+WE + L     ++I   Y     GW   E+RK  G+
Subjt:  ICNLVKWEWITLPTSLGRLI---YDVNSHGWMTDEIRKKKGM

RVX11981.1 putative ribonuclease H protein [Vitis vinifera]1.6e-1437.82Show/hide
Query:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP
        +A+  GC     P+  LG PLG +H     WD + E+++  L  W R  +SKG R+TL +  + S+PIY +SL+   K++TK +EKI  DF+W GG  + 
Subjt:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP

Query:  ICNLVKWEWITLPTSLGRL
          +L+KW+ +  P   G L
Subjt:  ICNLVKWEWITLPTSLGRL

XP_026438270.1 uncharacterized protein LOC113336811 [Papaver somniferum]9.5e-1540.34Show/hide
Query:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWRSL-LSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP
        +A++ GC     P T LG PLG  +   + WD +IE+ +A L  W ++ LS G R+TL   V+ SLPIY  SL +A  N+ K +E+II +F+W+GGV + 
Subjt:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWRSL-LSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP

Query:  ICNLVKWEWITLPTSLGRL
          + V W+ +  P +LG L
Subjt:  ICNLVKWEWITLPTSLGRL

XP_028112693.1 uncharacterized protein LOC114310799 [Camellia sinensis]4.3e-1544.66Show/hide
Query:  LGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITLPTSL
        LG PLGGN      WDP++EKI  WL GW R+LLS+G R TL + V++ + IY +S+     N+ KF+EK+  DF+W G       +LVKWE ++L    
Subjt:  LGFPLGGNHHIRHLWDPLIEKIKAWLDGW-RSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITLPTSL

Query:  GRL
        G L
Subjt:  GRL

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein1.2e-1540.34Show/hide
Query:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP
        +A   GC     PL  LG PLGG+      W+P+++K    LDGW+ + LSKG R+TL Q V++SLP+Y +SL  A +++TK +EK++ DF+W G     
Subjt:  MASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKP

Query:  ICNLVKWEWITLPTSLGRL
          +LV W+ +  P   G L
Subjt:  ICNLVKWEWITLPTSLGRL

A0A803P8A0 Uncharacterized protein5.5e-1640.68Show/hide
Query:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI
        A+  GC     P+T LG PLGG+   +  W+P+++K    +DGW+ S LS+G R+TL Q V++SLPIY +SL    K + K +EK++ DF W GG     
Subjt:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI

Query:  CNLVKWEWITLPTSLGRL
         +LV W+ +  P + G L
Subjt:  CNLVKWEWITLPTSLGRL

A0A803PSR8 Uncharacterized protein9.3e-1643.93Show/hide
Query:  PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITL
        P+T LG PLGG+      W+P+++K    LDGW+ S LS+  R+TL Q V++SLPIY +SL  A K + K +EK++ DF W GG      +LV W+ +  
Subjt:  PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITL

Query:  PTSLGRL
        P S G L
Subjt:  PTSLGRL

A0A803PZR9 Uncharacterized protein5.5e-1640.18Show/hide
Query:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI
        A+  GC     P+  LG PL G+   +  WDP++EK    LDGW+ + LS+G R TL Q V++SLPIY + L  AL ++   +EK++ DF+W GG     
Subjt:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI

Query:  CNLVKWEWITLP
         +L+ W+W+  P
Subjt:  CNLVKWEWITLP

A0A803QQM3 Uncharacterized protein8.4e-1742.37Show/hide
Query:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI
        A   GC     P+T LG PLGG+   R  W+P+++K    +DGW+ S LS+G R+TL Q V++SLPIY +SL  A K + K +EK++ DF W GG     
Subjt:  ASSFGC-----PLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWR-SLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPI

Query:  CNLVKWEWITLPTSLGRL
         +LV W+ +  P + G L
Subjt:  CNLVKWEWITLPTSLGRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTTCCTTTGGGTGCCCATTAACTATTTTAGGCTTTCCTCTTGGAGGAAACCACCACATAAGACACCTTTGGGATCCTCTCATCGAAAAAATAAAAGCTTGGTT
GGATGGATGGAGGAGCCTCCTTTCAAAAGGGGATAGGGTCACTCTTGCTCAATTAGTTATGAATAGCTTACCTATCTACTGCATCTCTCTCCTCTGGGCCTTGAAGAATT
TGACTAAGTTCATGGAAAAGATTATCATAGACTTCATTTGGAATGGTGGTGTTTACAAGCCTATTTGCAACTTGGTGAAATGGGAGTGGATAACTCTGCCTACATCGCTT
GGGAGGCTTATTTATGATGTGAATTCTCATGGGTGGATGACTGATGAGATTAGGAAGAAAAAAGGGATGGATCCTTTGGAAGATGGTTATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTTCCTTTGGGTGCCCATTAACTATTTTAGGCTTTCCTCTTGGAGGAAACCACCACATAAGACACCTTTGGGATCCTCTCATCGAAAAAATAAAAGCTTGGTT
GGATGGATGGAGGAGCCTCCTTTCAAAAGGGGATAGGGTCACTCTTGCTCAATTAGTTATGAATAGCTTACCTATCTACTGCATCTCTCTCCTCTGGGCCTTGAAGAATT
TGACTAAGTTCATGGAAAAGATTATCATAGACTTCATTTGGAATGGTGGTGTTTACAAGCCTATTTGCAACTTGGTGAAATGGGAGTGGATAACTCTGCCTACATCGCTT
GGGAGGCTTATTTATGATGTGAATTCTCATGGGTGGATGACTGATGAGATTAGGAAGAAAAAAGGGATGGATCCTTTGGAAGATGGTTATAACTAG
Protein sequenceShow/hide protein sequence
MASSFGCPLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWRSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITLPTSL
GRLIYDVNSHGWMTDEIRKKKGMDPLEDGYN