CuGenDBv2

Gene ID	Spg032542
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NF-kappa-B-activating protein
Genome location	scaffold3:22998737..23008293
RNA-Seq Expression	Spg032542
Synteny	Spg032542
Gene Ontology terms	GO:0044030 - regulation of DNA methylation (biological process) GO:2000232 - regulation of rRNA processing (biological process) GO:0005731 - nucleolus organizer region (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR009269 - NF-kappa-B-activating protein, C-terminal IPR040466 - NF-kappa-B-activating protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580871.1 NKAP family protein, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

XP_022152042.1 NF-kappa-B-activating protein [Momordica charantia]

4.8e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

XP_022934812.1 NF-kappa-B-activating protein-like [Cucurbita moschata]

4.8e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

XP_022971197.1 NF-kappa-B-activating protein-like [Cucurbita maxima]

4.8e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

XP_022983754.1 NF-kappa-B-activating protein-like [Cucurbita maxima]

4.8e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBL5 Nkap_C domain-containing protein

2.3e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

A0A5A7UH98 NF-kappa-B-activating protein

2.3e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

A0A5D3DPM0 NF-kappa-B-activating protein

2.3e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

A0A6J1I1B2 NF-kappa-B-activating protein-like

2.3e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

A0A6J1J8D5 NF-kappa-B-activating protein-like

2.3e-16

96.08

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLV RHI HD
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

SwissProt top hits

e value

%identity

Alignment

Q4V7C9 NF-kappa-B-activating protein

1.6e-06

54.35

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR
        M A+R+RKENQ+YSA++KRALA +N EE+ KRE K++   + +V R
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR

Q55ED4 NKAP family protein

2.5e-07

56.86

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNA+RIRKE+QVYSAE+++ALAM N EEKAKRE +++ D + L+   +  D
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

Q5SZT7 NKAP-like protein

1.6e-06

54.35

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR
        M A+R+RKENQ+YSA++KRALA +N EE+ KRE K++   + +V R
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR

Q8N5F7 NF-kappa-B-activating protein

1.6e-06

54.35

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR
        M A+R+RKENQ+YSA++KRALA +N EE+ KRE K++   + +V R
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR

Q9D0F4 NF-kappa-B-activating protein

1.6e-06

54.35

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR
        M A+R+RKENQ+YSA++KRALA +N EE+ KRE K++   + +V R
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLR

Arabidopsis top hits

e value

%identity

Alignment

AT4G02720.1 unknown protein

1.8e-16

84.31

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Query:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD
        MNAIRIRKENQVYSAEDKRALAM+NYEEKAKRE KVM DLQRLV RH+  +
Subjt:  MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHD

Sequences

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CDS sequence

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ATGAATGCAATCCGTATCAGAAAAGAAAACCAAGTTTACAGTGCTGAAGATAAAAGAGCCCTTGCAATGTATAACTATGAAGAGAAAGCAAAACGTGAGAGGAAGGTGAT
GGATGATCTTCAACGGCTTGTTCTGCGCCACATAAGTCATGATGCGTTATTCTTACAGCCTATCTTGATTATTGATGCCATTAGTTATCTCAATGGATGCTTCTCAAGGG
CCTCAGTGCTTAAGTTCTGCACTCGCTGGGAAGCAGACCATTTTAGTAGAAAGGATACCTCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTATATCG
AATACAAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGCATGAAAAGGTTTCTTTCTCCCTTTGTGATTGAATATGAAGGAGTGGCTGGGGAAGAAAGGTTGACAGC
TTGTTTCACCATACGGAAAGGACATAAAACCCAACATGGGAAGCATAACTTTTTGGTTGGTAATGTCAAGGTCTATCTAAAGGTGAGGTTTTTAAGCCATAAGATACAGG
AAGATAAGGAGTCGTGGCTAGTAGATAAAGTAAATGAAGAACAAGTCTTTCTCTCTCCGTCTTCACGTGAGATCTCTCTCTCTCTCTCGGCAGTCTCTCTCTCCCTCTCG
TGTGAGGCCGTGGCCTGTCCAGCTGTCGTCGCCTGGTTCACTGTCCAGCTCGAGCGTTGCTTTCCGTCGAGCAGCACCGTCGTGATCTCCCTCTGTAGTGTTTGGCCAAG
GCCCGTATTTGTGGGTTTTCGTCGAGAAGTGGGAAAAAGCCCGTGGATGGTGCGTGACCAGCACCTTGGAGTGTATGTTCCTCACGTTTTTGCCTCTGTCCAGCGACGTT
CGTGGGTGCTTCGGCATCGCTTAACAATCTCGTGTTCGATTGAGTTCGAATCACTTAAGTTCAATCACCCACTGCCCAAGAAGCGTTCTAGCACACTGGTTGAGGTATAT
ATAACCCGTCTAGAGTGGAAACAGTGCTTGTGTGAAGCATGTAATGTGTCTTTTGCATTGCCTGAGATGGGCATTATTGCGGTTGTGCTGATACCCCCTCCCCCATCTGC
CCCCAACATTATAGATGTTGCAGGTACGAAAGATGATCTGGACCTTGGTGGCGAGGAGGAAAACTATGAAGAGGATCCCTAG

mRNA sequence

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Protein sequence

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MNAIRIRKENQVYSAEDKRALAMYNYEEKAKRERKVMDDLQRLVLRHISHDALFLQPILIIDAISYLNGCFSRASVLKFCTRWEADHFSRKDTSARMSPTWTPWINTSIS
NTKRVVSHSVTRISMKRFLSPFVIEYEGVAGEERLTACFTIRKGHKTQHGKHNFLVGNVKVYLKVRFLSHKIQEDKESWLVDKVNEEQVFLSPSSREISLSLSAVSLSLS
CEAVACPAVVAWFTVQLERCFPSSSTVVISLCSVWPRPVFVGFRREVGKSPWMVRDQHLGVYVPHVFASVQRRSWVLRHRLTISCSIEFESLKFNHPLPKKRSSTLVEVY
ITRLEWKQCLCEACNVSFALPEMGIIAVVLIPPPPSAPNIIDVAGTKDDLDLGGEEENYEEDP

Spg032542 (gene) of Sponge gourd (cylindrica) v1 genome