; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032575 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032575
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold2:40160614..40173056
RNA-Seq ExpressionSpg032575
SyntenySpg032575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD72257.1 hypothetical protein [Oryza sativa Japonica Group]1.2e-0734.71Show/hide
Query:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL
        +T+ W+PP  GW K NVD +F +    A AG+V+RD    V+L++     H G+ + AE  A           VK    L         RR+ NRVAH L
Subjt:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL

Query:  ARFALRERGCEYWMLESVPTC
        A+FA+R      W +++ P+C
Subjt:  ARFALRERGCEYWMLESVPTC

KAA0051788.1 hypothetical protein E6C27_scaffold60G001950 [Cucumis melo var. makuwa]8.1e-0949.37Show/hide
Query:  RSVLRNP--VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL
        + V+RN   VK+PFYP  TS SL  + PL+ N F+VQP N +PSRA E  G+++QD ++ LKGT   L +   GVNS+L
Subjt:  RSVLRNP--VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL

KAF8776631.1 hypothetical protein HU200_003355 [Digitaria exilis]7.3e-1036.15Show/hide
Query:  KWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSA------AVSYDHVGNLDMAEGLAVPT---------HVKYKFSLTRRDRNRVAHVLARF
        +WSPP+EGW KVNVD AF E+    G GV+V D    V LS+      A S + V  L   EG+ +              +K    RR+ NRVAH LA+ 
Subjt:  KWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSA------AVSYDHVGNLDMAEGLAVPT---------HVKYKFSLTRRDRNRVAHVLARF

Query:  ALRERGCEYWMLESVPTCACLLVEEDVYCL
        A R +    W   ++P C   L+ +D  C+
Subjt:  ALRERGCEYWMLESVPTCACLLVEEDVYCL

TYK14930.1 hypothetical protein E5676_scaffold1623G00250 [Cucumis melo var. makuwa]2.0e-0751.43Show/hide
Query:  VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL
        VK+ FYP  TS SL  + PL+ N F+VQP N++PSRA E  G +V+D ++ LKGT   L +   GVNSIL
Subjt:  VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.1e-0826.88Show/hide
Query:  LLDWAVNYLVVFREVSRVYLAGIRGVLRSTVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLAVPTHVKY---
        L++WA  Y + FRE     + G R    + + W PP+EG YK+N DA+F      AG G+++ ++  +VM +A    +++ ++DMAE +A    ++    
Subjt:  LLDWAVNYLVVFREVSRVYLAGIRGVLRSTVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLAVPTHVKY---

Query:  ------------------------------KFSLTRRDRNRVAHVLARFALRERGCEYWM
                                       F+  +R+ N+ AH+LAR AL       WM
Subjt:  ------------------------------KFSLTRRDRNRVAHVLARFALRERGCEYWM

TrEMBL top hitse value%identityAlignment
A0A5A7U922 Uncharacterized protein3.9e-0949.37Show/hide
Query:  RSVLRNP--VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL
        + V+RN   VK+PFYP  TS SL  + PL+ N F+VQP N +PSRA E  G+++QD ++ LKGT   L +   GVNS+L
Subjt:  RSVLRNP--VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL

A0A5D3CU30 Uncharacterized protein9.6e-0851.43Show/hide
Query:  VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL
        VK+ FYP  TS SL  + PL+ N F+VQP N++PSRA E  G +V+D ++ LKGT   L +   GVNSIL
Subjt:  VKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVNSIL

A0A6J1DAR4 uncharacterized protein LOC1110189541.5e-0826.88Show/hide
Query:  LLDWAVNYLVVFREVSRVYLAGIRGVLRSTVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLAVPTHVKY---
        L++WA  Y + FRE     + G R    + + W PP+EG YK+N DA+F      AG G+++ ++  +VM +A    +++ ++DMAE +A    ++    
Subjt:  LLDWAVNYLVVFREVSRVYLAGIRGVLRSTVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLAVPTHVKY---

Query:  ------------------------------KFSLTRRDRNRVAHVLARFALRERGCEYWM
                                       F+  +R+ N+ AH+LAR AL       WM
Subjt:  ------------------------------KFSLTRRDRNRVAHVLARFALRERGCEYWM

I1NL00 RNase H domain-containing protein3.0e-0935.54Show/hide
Query:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL
        +T+ W+PP  GW K NVD +F +    A AG+V+RD    V+L++     H G+ + AE  A           VK    L         RR+RNRVAH L
Subjt:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL

Query:  ARFALRERGCEYWMLESVPTC
        A+FA+R      W +++ P+C
Subjt:  ARFALRERGCEYWMLESVPTC

Q5SND6 RNase H domain-containing protein5.6e-0834.71Show/hide
Query:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL
        +T+ W+PP  GW K NVD +F +    A AG+V+RD    V+L++     H G+ + AE  A           VK    L         RR+ NRVAH L
Subjt:  STVKWSPPEEGWYKVNVDAAFCEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLA-------VPTHVKYKFSL--------TRRDRNRVAHVL

Query:  ARFALRERGCEYWMLESVPTC
        A+FA+R      W +++ P+C
Subjt:  ARFALRERGCEYWMLESVPTC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTTTGGTTCCCACAAACCAATATCAGAAATCCAAGAGATATAGCGGGTGAATTCGTGTGGTGGTGTCCATTGGAAGATCAAGAACATTATTTGGGAGCATTGCG
CAGTGTTCTTCGAAATCCGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTTATCCTTAAGTATCAGTGCTCCTCTAATGAAAAACCTGTTTGAGGTCCAACCAACAA
ACAGAAGTCCCTCTCGTGCCATAGAGAATGCAGGGACCATTGTTCAAGACCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCAAGAGTCAGGAAGGAGTGAAT
TCCATCTTGTGTGATTATGTTCCCAGCTCCCCATTCGATCTTGTCCCCAAAATGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGG
AGACTGGTGGGAGTCTAGAGGGAGCCTTGAGGGGAATTCTCTGAGACCCCCATTCGGTCTTGCCCCTCAAATGGATACCCCCACCCGCATGTCTCCTGCATGGATGCTTT
GGATCATTGCATCTGTATCAAATACAAGGTGGGTCGTATCACATAGTGTCACCAGGATAAGAAAGTTGGAGGCCCAAAAATGGAGTCAAAATCGGGCAATTATTGAAGAT
TCAGGGCTTAGCGTCGAGACGCTAAGCCTGGAGTGTTCTAGAATCGCGATAGCGTCGCGACGCTGTCTAGGTAGCGTCGCGACGCTGCGACGTCTTGGAGCCCAAGAAAA
GATGACGTCAGAGCGTCGCGACGCTGTGACGCGCTTGCGTGATGTATATGATTTCGTTGGTGACTTCAAGGATGCAGTTGATGAACATGAGCTACTTAATCTTGGTTTCA
GGGGTGCTGCTTTCACTTTGTGCAATGGGAGGCCGGGAGTGGAAACAGGCAAGAGGATTCGAAGGTTTGAGGAAACTTGGCTCCAGGCTAATGATTTTGGGGAGGCAGTT
TCGACGGGCTGGAAGTTTAGGCCTCCAACTAGTTCACCTGCAGAGTTGGCATCAGTGACTTCCCGATGCATGTCACATTTGAGTAGATGGGGAAATTCAAAGGGTGGAAG
TTTTGGTCAGCGTATCCGGGTCGCTACAGCGAATGTTCAACAGAAGTTTAGAGGGCAGGTTCCTTCAGCGGGGCTTTTGGATTGGGCTGTGAATTATCTTGTTGTTTTTC
GAGAGGTCTCTCGGGTCTATTTAGCTGGGATTAGAGGGGTTCTTCGGAGTACAGTCAAATGGTCCCCACCGGAGGAGGGTTGGTATAAGGTGAATGTGGATGCTGCCTTC
TGTGAAGATCTGTTTCGGGCAGGTGCTGGAGTTGTTGTTCGGGACGAGGCTAGGCGGGTGATGTTGTCGGCTGCCGTTAGTTATGATCATGTGGGAAATTTGGATATGGC
GGAGGGGCTAGCGGTTCCAACGCATGTTAAGTATAAGTTCAGTTTGACGAGAAGGGACAGAAATCGGGTCGCCCATGTATTAGCTCGTTTTGCTTTAAGAGAGAGAGGCT
GTGAGTATTGGATGCTGGAATCGGTACCTACGTGTGCCTGTCTTCTAGTTGAGGAAGATGTATATTGTCTCTGTAATGGCTGCACCAACTGCCGCCGTCGCCGTCCCTTC
TTGCCGTCAGTCGCGCCGTCCAGCTGCCTCGCACCGCCGCCCTTTACCCCGTCCTCCTCGCGCCGTCGGTTCCGTCTTGCACAGCCACCGCCCAGCTGCCTCGCTCAGCC
CGCCGTTGATCTCCTCGCGCCGTCGCCCCTGTTCTTTTCTGTCGCCGTTGTTCTCACTCCGGCGCCCAAGCACGCGAGTGACCTAGCAAGCCGAGTCGTCGCCGCCATTC
CTTCCTCTCGGTTCAGTAGATCTGGAATCACCCGCGAGGGTTGTCGTCTTTCCTCGATTTCGGCCAGCAGTGGACCCTGTGCAACCTGCATCTTAGATCTCGTTTCCCTC
GCAATCTTGCTTCTGCCCAGTGTGTTTCGGCGTGGTTCCAGCCCTCTTTCAGCGTTATTGGGAGATTTCAATTTTGGCCACTTTCGAACACTGTACAACACCAAGCTTTC
CGCCCCTGTTCTCTCGCTTTGTGAACAAGCATCATGCTTTGTTGGATTCTTAAGCATGTTGCTTGATGATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTTTGGTTCCCACAAACCAATATCAGAAATCCAAGAGATATAGCGGGTGAATTCGTGTGGTGGTGTCCATTGGAAGATCAAGAACATTATTTGGGAGCATTGCG
CAGTGTTCTTCGAAATCCGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTTATCCTTAAGTATCAGTGCTCCTCTAATGAAAAACCTGTTTGAGGTCCAACCAACAA
ACAGAAGTCCCTCTCGTGCCATAGAGAATGCAGGGACCATTGTTCAAGACCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCAAGAGTCAGGAAGGAGTGAAT
TCCATCTTGTGTGATTATGTTCCCAGCTCCCCATTCGATCTTGTCCCCAAAATGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGG
AGACTGGTGGGAGTCTAGAGGGAGCCTTGAGGGGAATTCTCTGAGACCCCCATTCGGTCTTGCCCCTCAAATGGATACCCCCACCCGCATGTCTCCTGCATGGATGCTTT
GGATCATTGCATCTGTATCAAATACAAGGTGGGTCGTATCACATAGTGTCACCAGGATAAGAAAGTTGGAGGCCCAAAAATGGAGTCAAAATCGGGCAATTATTGAAGAT
TCAGGGCTTAGCGTCGAGACGCTAAGCCTGGAGTGTTCTAGAATCGCGATAGCGTCGCGACGCTGTCTAGGTAGCGTCGCGACGCTGCGACGTCTTGGAGCCCAAGAAAA
GATGACGTCAGAGCGTCGCGACGCTGTGACGCGCTTGCGTGATGTATATGATTTCGTTGGTGACTTCAAGGATGCAGTTGATGAACATGAGCTACTTAATCTTGGTTTCA
GGGGTGCTGCTTTCACTTTGTGCAATGGGAGGCCGGGAGTGGAAACAGGCAAGAGGATTCGAAGGTTTGAGGAAACTTGGCTCCAGGCTAATGATTTTGGGGAGGCAGTT
TCGACGGGCTGGAAGTTTAGGCCTCCAACTAGTTCACCTGCAGAGTTGGCATCAGTGACTTCCCGATGCATGTCACATTTGAGTAGATGGGGAAATTCAAAGGGTGGAAG
TTTTGGTCAGCGTATCCGGGTCGCTACAGCGAATGTTCAACAGAAGTTTAGAGGGCAGGTTCCTTCAGCGGGGCTTTTGGATTGGGCTGTGAATTATCTTGTTGTTTTTC
GAGAGGTCTCTCGGGTCTATTTAGCTGGGATTAGAGGGGTTCTTCGGAGTACAGTCAAATGGTCCCCACCGGAGGAGGGTTGGTATAAGGTGAATGTGGATGCTGCCTTC
TGTGAAGATCTGTTTCGGGCAGGTGCTGGAGTTGTTGTTCGGGACGAGGCTAGGCGGGTGATGTTGTCGGCTGCCGTTAGTTATGATCATGTGGGAAATTTGGATATGGC
GGAGGGGCTAGCGGTTCCAACGCATGTTAAGTATAAGTTCAGTTTGACGAGAAGGGACAGAAATCGGGTCGCCCATGTATTAGCTCGTTTTGCTTTAAGAGAGAGAGGCT
GTGAGTATTGGATGCTGGAATCGGTACCTACGTGTGCCTGTCTTCTAGTTGAGGAAGATGTATATTGTCTCTGTAATGGCTGCACCAACTGCCGCCGTCGCCGTCCCTTC
TTGCCGTCAGTCGCGCCGTCCAGCTGCCTCGCACCGCCGCCCTTTACCCCGTCCTCCTCGCGCCGTCGGTTCCGTCTTGCACAGCCACCGCCCAGCTGCCTCGCTCAGCC
CGCCGTTGATCTCCTCGCGCCGTCGCCCCTGTTCTTTTCTGTCGCCGTTGTTCTCACTCCGGCGCCCAAGCACGCGAGTGACCTAGCAAGCCGAGTCGTCGCCGCCATTC
CTTCCTCTCGGTTCAGTAGATCTGGAATCACCCGCGAGGGTTGTCGTCTTTCCTCGATTTCGGCCAGCAGTGGACCCTGTGCAACCTGCATCTTAGATCTCGTTTCCCTC
GCAATCTTGCTTCTGCCCAGTGTGTTTCGGCGTGGTTCCAGCCCTCTTTCAGCGTTATTGGGAGATTTCAATTTTGGCCACTTTCGAACACTGTACAACACCAAGCTTTC
CGCCCCTGTTCTCTCGCTTTGTGAACAAGCATCATGCTTTGTTGGATTCTTAAGCATGTTGCTTGATGATTCATAA
Protein sequenceShow/hide protein sequence
MIFWFPQTNIRNPRDIAGEFVWWCPLEDQEHYLGALRSVLRNPVKLPFYPWATSLSLSISAPLMKNLFEVQPTNRSPSRAIENAGTIVQDPETPLKGTHLYLPKSQEGVN
SILCDYVPSSPFDLVPKMCEHHHYGYTGMTLRLLEAGDWWESRGSLEGNSLRPPFGLAPQMDTPTRMSPAWMLWIIASVSNTRWVVSHSVTRIRKLEAQKWSQNRAIIED
SGLSVETLSLECSRIAIASRRCLGSVATLRRLGAQEKMTSERRDAVTRLRDVYDFVGDFKDAVDEHELLNLGFRGAAFTLCNGRPGVETGKRIRRFEETWLQANDFGEAV
STGWKFRPPTSSPAELASVTSRCMSHLSRWGNSKGGSFGQRIRVATANVQQKFRGQVPSAGLLDWAVNYLVVFREVSRVYLAGIRGVLRSTVKWSPPEEGWYKVNVDAAF
CEDLFRAGAGVVVRDEARRVMLSAAVSYDHVGNLDMAEGLAVPTHVKYKFSLTRRDRNRVAHVLARFALRERGCEYWMLESVPTCACLLVEEDVYCLCNGCTNCRRRRPF
LPSVAPSSCLAPPPFTPSSSRRRFRLAQPPPSCLAQPAVDLLAPSPLFFSVAVVLTPAPKHASDLASRVVAAIPSSRFSRSGITREGCRLSSISASSGPCATCILDLVSL
AILLLPSVFRRGSSPLSALLGDFNFGHFRTLYNTKLSAPVLSLCEQASCFVGFLSMLLDDS