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Spg032600 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032600
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Genome locationscaffold11:8535020..8536676
RNA-Seq ExpressionSpg032600
SyntenySpg032600
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004177 - aminopeptidase activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]5.8e-2194.74Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDEG
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG

ADN33674.1 transposase [Cucumis melo subsp. melo]5.8e-2194.74Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDEG
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]7.6e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

TYK11242.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa]7.6e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

TYK30761.1 putative transposase [Cucumis melo var. makuwa]7.6e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

TrEMBL top hitse value%identityAlignment
A0A5A7U1Q3 Putative transposase3.7e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

A0A5A7VA60 Putative aspartyl aminopeptidase3.7e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

A0A5D3E590 Putative transposase3.7e-2177.78Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDE  + +   K ++  FE
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFE

D0UIX2 Putative transposase2.8e-2194.74Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDEG
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG

E5GB32 Transposase2.8e-2194.74Show/hide
Query:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG
        +PSESAFSTGGRVLD FRSSLTPQTAEALICAQNWIQSKPLDDM+EEIDGAEEIDEG
Subjt:  LPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEG

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase6.0e-0558.82Show/hide
Query:  SESAFSTGGRVLDPFRSSLTPQTAEALICAQNWI
        SESAFS GGRV+DP+R+ L  +  EALIC ++W+
Subjt:  SESAFSTGGRVLDPFRSSLTPQTAEALICAQNWI

P08770 Putative AC transposase6.0e-0558.82Show/hide
Query:  SESAFSTGGRVLDPFRSSLTPQTAEALICAQNWI
        SESAFS GGRV+DP+R+ L  +  EALIC ++W+
Subjt:  SESAFSTGGRVLDPFRSSLTPQTAEALICAQNWI

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.6e-0528.35Show/hide
Query:  TQNSSRIGP-----------FISVIIMAPPTVAMVPTNLAWLLMLLIFTFSSLKKYVLDFRNFNSCFREGEIGFGLCGLVTKNGCAYLPSESAFSTGGRV
        T NS+ + P           ++S I  + P+++ +   L   LM  I  F  L+ + L+   F +  +       +   +  +G +     SA +TG ++
Subjt:  TQNSSRIGP-----------FISVIIMAPPTVAMVPTNLAWLLMLLIFTFSSLKKYVLDFRNFNSCFREGEIGFGLCGLVTKNGCAYLPSESAFSTGGRV

Query:  LDPFRSSLTPQTAEALICAQNWIQSKP
        LD +RSSL P+T EAL CA++W+Q  P
Subjt:  LDPFRSSLTPQTAEALICAQNWIQSKP

Q941D3 Probable plastid-lipid-associated protein 8, chloroplastic1.4e-0663.89Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ
        G LK LD +W+QV+FEP E+KVG LEF YG +SEV+
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ

Arabidopsis top hitse value%identityAlignment
AT5G19940.1 Plastid-lipid associated protein PAP / fibrillin family protein1.0e-0763.89Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ
        G LK LD +W+QV+FEP E+KVG LEF YG +SEV+
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ

AT5G19940.2 Plastid-lipid associated protein PAP / fibrillin family protein1.0e-0763.89Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ
        G LK LD +W+QV+FEP E+KVG LEF YG +SEV+
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGGCCCAGCTGAAACAGCCGATTGTGATCATAATTGAACCTTTGATTGTGTGTTCAAGGCTGATATCGCCCCTTTGTTGTTGGTGGTTTGCTCTCTCTTTCAC
CCAAAATAGCTCTAGAATTGGGCCTTTTATCAGTGTCATTATCATGGCTCCTCCAACTGTTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTA
CCTTCTCGAGCCTGAAAAAGTATGTGTTGGATTTTAGGAACTTCAATTCATGTTTTAGAGAGGGAGAGATTGGGTTTGGACTGTGTGGTTTGGTGACCAAAAATGGATGT
GCTTATTTACCATCTGAATCGGCTTTTAGCACTGGAGGACGAGTATTAGATCCATTTCGAAGTTCACTAACTCCTCAAACTGCAGAGGCCCTCATTTGTGCTCAAAATTG
GATTCAATCTAAACCTCTTGATGACATGAGTGAAGAAATTGATGGAGCTGAAGAAATTGATGAAGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCG
AGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAGCGAGGTGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGGCCCAGCTGAAACAGCCGATTGTGATCATAATTGAACCTTTGATTGTGTGTTCAAGGCTGATATCGCCCCTTTGTTGTTGGTGGTTTGCTCTCTCTTTCAC
CCAAAATAGCTCTAGAATTGGGCCTTTTATCAGTGTCATTATCATGGCTCCTCCAACTGTTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTA
CCTTCTCGAGCCTGAAAAAGTATGTGTTGGATTTTAGGAACTTCAATTCATGTTTTAGAGAGGGAGAGATTGGGTTTGGACTGTGTGGTTTGGTGACCAAAAATGGATGT
GCTTATTTACCATCTGAATCGGCTTTTAGCACTGGAGGACGAGTATTAGATCCATTTCGAAGTTCACTAACTCCTCAAACTGCAGAGGCCCTCATTTGTGCTCAAAATTG
GATTCAATCTAAACCTCTTGATGACATGAGTGAAGAAATTGATGGAGCTGAAGAAATTGATGAAGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCG
AGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAGCGAGGTGCAGTGA
Protein sequenceShow/hide protein sequence
MKEAQLKQPIVIIIEPLIVCSRLISPLCCWWFALSFTQNSSRIGPFISVIIMAPPTVAMVPTNLAWLLMLLIFTFSSLKKYVLDFRNFNSCFREGEIGFGLCGLVTKNGC
AYLPSESAFSTGGRVLDPFRSSLTPQTAEALICAQNWIQSKPLDDMSEEIDGAEEIDEGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSEVQ