CuGenDBv2

Gene ID	Spg032630
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	FAM178 domain-containing protein
Genome location	scaffold11:5780498..5781623
RNA-Seq Expression	Spg032630
Synteny	Spg032630
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583513.1 hypothetical protein SDJN03_19445, partial [Cucurbita argyrosperma subsp. sororia]

9.0e-64

88.65

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK PPALQ+P+LK+CYLLQ FLNNEVNSLV LT+EKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

XP_022152868.1 uncharacterized protein LOC111020493 [Momordica charantia]

1.1e-64

90.07

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS VALKKRK IIGLDDLLTDHYKDKCKLVEKES+QAKKKKNYNSDDDD+GKEAVVSQVVDECQNKM+QLGGEEDTSIWGLKVFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QKTPP LQ+P+LKSC+LL+ FLNNEVNSLV LTMEKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

XP_022964812.1 uncharacterized protein LOC111464803 isoform X2 [Cucurbita moschata]

7.6e-63

87.94

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VF E
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK PPALQ+P+LK+CYLLQ FLNNEVNSLV LT+EKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

XP_023520957.1 uncharacterized protein LOC111784515 isoform X1 [Cucurbita pepo subsp. pepo]

2.4e-64

89.36

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

XP_023520959.1 uncharacterized protein LOC111784515 isoform X3 [Cucurbita pepo subsp. pepo]

2.4e-64

89.36

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DG18 uncharacterized protein LOC111020493

5.1e-65

90.07

Show/hide

Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS VALKKRK IIGLDDLLTDHYKDKCKLVEKES+QAKKKKNYNSDDDD+GKEAVVSQVVDECQNKM+QLGGEEDTSIWGLKVFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QKTPP LQ+P+LKSC+LL+ FLNNEVNSLV LTMEKG  FL
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

A0A6J1HZ38 uncharacterized protein LOC111469418 isoform X1

3.7e-63

88.11

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK   PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

A0A6J1I2V5 uncharacterized protein LOC111469418 isoform X4

3.7e-63

88.11

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK   PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

A0A6J1I3U7 uncharacterized protein LOC111469418 isoform X2

3.7e-63

88.11

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK   PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

A0A6J1I5H7 uncharacterized protein LOC111469418 isoform X3

3.7e-63

88.11

Show/hide

Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        MDGPLDFESEDPLLSS V+LKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKK Y+SDD+D+GKEAVVSQVVDECQNKMNQLGGEEDTSIWGL VFGE
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QK   PPALQ+P+LK+CYLLQTFLNNEVNSLV LT+EKG  FL
Subjt:  QK--TPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28130.1 unknown protein

4.5e-37

51.06

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Query:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE
        +DGPLDFE+EDPL++    ++KRKK+IGLDDLL+D YK+K K+++K +K+ K  K Y+SDDD+ G+   +SQ V ECQN+MN++  EE+   WGL +FG+
Subjt:  MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGE

Query:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL
        QKTP      DL SC LL+ F+NN++N +V LT+++G  F+
Subjt:  QKTPPALQNPDLKSCYLLQTFLNNEVNSLVKLTMEKGALFL

Sequences

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CDS sequence

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ATGGATGGTCCTCTAGACTTTGAATCGGAAGACCCGCTTCTCAGCTCCTCTGTCGCTCTCAAGAAGAGGAAAAAGATTATTGGATTAGATGATCTTCTGACTGATCACTA
CAAGGATAAATGCAAACTCGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAACTATAATTCAGATGATGATGATTATGGCAAGGAGGCCGTAGTGTCCCAAGTCG
TTGATGAATGCCAAAATAAGATGAATCAACTGGGAGGTGAGGAAGATACATCCATATGGGGCTTAAAGGTTTTCGGAGAACAGAAAACCCCACCAGCTTTACAAAATCCT
GATCTCAAAAGTTGCTACCTTTTGCAAACTTTCCTAAATAATGAAGTTAACTCTCTGGTGAAGCTCACCATGGAGAAAGGTGCGCTTTTCCTTCATGTTGAATTCTCAGA
ATCTCCCTAA

mRNA sequence

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Protein sequence

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MDGPLDFESEDPLLSSSVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYNSDDDDYGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLKVFGEQKTPPALQNP
DLKSCYLLQTFLNNEVNSLVKLTMEKGALFLHVEFSESP

Spg032630 (gene) of Sponge gourd (cylindrica) v1 genome