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Spg032635 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032635
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:8959152..8963890
RNA-Seq ExpressionSpg032635
SyntenySpg032635
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62231.1 hypothetical protein VITISV_010992 [Vitis vinifera]5.1e-0530.6Show/hide
Query:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEEQQGSLNSHLKEERVKIKSNLL
        +ET+ +V DR+ + S+WS RN  WV L     SGGILI+W            + ++    +++K   L++I  ID   EQ+G L+S L  + V  K  L 
Subjt:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEEQQGSLNSHLKEERVKIKSNLL

Query:  DITVKEQ----KMLLQKWLR----RSVFDHEVAS
        ++ ++E+    + +  KW++     S F H+V +
Subjt:  DITVKEQ----KMLLQKWLR----RSVFDHEVAS

RVW51280.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-0529.68Show/hide
Query:  DVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSG-----------GILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEE
        DV MI     +ET+ ++ DR+ + S+W++RN +WV L A+  S            G   M +   ++  ++ WN   F  + +KK   LN +   D I E
Subjt:  DVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSG-----------GILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEE

Query:  QQGSLNSHLKEERVKIKSNLLDITVKEQKMLLQ----KWLR----RSVFDHEVAS
        Q+G LN  L  +R   K  L ++ ++E+    Q    KW++     S F H+VA+
Subjt:  QQGSLNSHLKEERVKIKSNLLDITVKEQKMLLQ----KWLR----RSVFDHEVAS

TYK11577.1 hypothetical protein E5676_scaffold263G00140 [Cucumis melo var. makuwa]7.3e-0441.67Show/hide
Query:  ETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMI-------EGCIRRWNNEVFDNMIDKKIE
        ET+   I+R+ IK +W +R   WV L+A R S GILIMWKED I       +G +RR        ++ KK+E
Subjt:  ETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMI-------EGCIRRWNNEVFDNMIDKKIE

TrEMBL top hitse value%identityAlignment
A0A2N9GJ10 zf-RVT domain-containing protein1.9e-0539.13Show/hide
Query:  ISKEMIVLLKRQPVCIRSEENEAKMETQGEYSANSVDVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE
        + K+M +L K+  V I+  E E     +       VD + I S    ET+LD +D + +KSIWS+R  +WV L+A  T+GGILIMW + ++E
Subjt:  ISKEMIVLLKRQPVCIRSEENEAKMETQGEYSANSVDVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE

A0A2N9GZD9 Endo/exonuclease/phosphatase domain-containing protein2.1e-0447.83Show/hide
Query:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE
        +E +LD+IDRKT++S+W   +V+WV L + R SGGI++MW   ++E
Subjt:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE

A0A2N9J584 UBC core domain-containing protein1.2e-0436.96Show/hide
Query:  ISKEMIVLLKRQPVCIRSEENEAKMETQGEYSANSVDVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE
        + K+M +L K+  V I+  E E  +    +  A+   +   S     E +LD +D + +KSIWS+R V+WV L+A  T+GGILIMW + ++E
Subjt:  ISKEMIVLLKRQPVCIRSEENEAKMETQGEYSANSVDVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIE

A0A438EUA1 Transposon TX1 uncharacterized 149 kDa protein1.1e-0529.68Show/hide
Query:  DVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSG-----------GILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEE
        DV MI     +ET+ ++ DR+ + S+W++RN +WV L A+  S            G   M +   ++  ++ WN   F  + +KK   LN +   D I E
Subjt:  DVEMISSRKDEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSG-----------GILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEE

Query:  QQGSLNSHLKEERVKIKSNLLDITVKEQKMLLQ----KWLR----RSVFDHEVAS
        Q+G LN  L  +R   K  L ++ ++E+    Q    KW++     S F H+VA+
Subjt:  QQGSLNSHLKEERVKIKSNLLDITVKEQKMLLQ----KWLR----RSVFDHEVAS

A5C9R9 Reverse transcriptase domain-containing protein2.5e-0530.6Show/hide
Query:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEEQQGSLNSHLKEERVKIKSNLL
        +ET+ +V DR+ + S+WS RN  WV L     SGGILI+W            + ++    +++K   L++I  ID   EQ+G L+S L  + V  K  L 
Subjt:  EETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEEQQGSLNSHLKEERVKIKSNLL

Query:  DITVKEQ----KMLLQKWLR----RSVFDHEVAS
        ++ ++E+    + +  KW++     S F H+V +
Subjt:  DITVKEQ----KMLLQKWLR----RSVFDHEVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGGAATAGTCCATCGGGCCCATATCATCACCTATCAGGAAGGAAATATGCCATGGAAAGAAACGTCGGCGTCCATGGAAGTTTCTCTCTGGAGATGGCACGT
GCCTTTTACAGGGGTCCATTTGACCCGAAATTCAACAGCATGGACCGATGAAGAATTGAGGATGGACACCATTATCCAATGGGAAAAGCAATACGAGGATGAAAGAGAAG
AGATAGATCAAGTCTCGGAGTTATCATACTCAAGCCCAGACAGCAAGGAAGGGAAAGAAAACGAGATAGAGGGGAGCAATAAGGATAACGGATTCCCAGATGACTTTCAC
CCATGCTTCGACGAAGATGAGCAAGAAACAGGAGAAGGAAGGGAAGGAAACAAGGGGCCCAAGGACTCCCAACTTGCGCAAAAAGATCTGAGAGAGAGGAATATGGAGGA
AAGCTCGAAAGCCCTGACAGTGATTCAAGCGAATGAGTTCAACGAGGGGAAAAAAGCTAGGAGCAATGATGCATATGATTTTGCTATCAGCAAGGAGATGATAGTTTTGT
TGAAGAGACAACCTGTGTGTATAAGATCCGAGGAGAATGAAGCAAAGATGGAGACCCAAGGAGAATACTCTGCTAACTCAGTAGATGTAGAGATGATTAGTTCTAGGAAA
GATGAGGAGACTAGGTTGGATGTAATTGACAGGAAGACTATCAAGTCTATTTGGAGCTCCAGAAACGTTAATTGGGTAGAGCTGGAGGCTGCGAGGACTTCTGGTGGCAT
TCTCATCATGTGGAAAGAGGATATGATTGAGGGGTGCATTCGTAGATGGAACAATGAGGTCTTTGACAATATGATTGATAAAAAGATTGAATGTTTGAACCAAATTGAGA
GGATCGACTTAATAGAGGAGCAGCAGGGTAGTCTTAATTCCCACCTTAAAGAGGAAAGAGTGAAAATCAAATCTAATCTTTTAGACATCACGGTGAAAGAGCAGAAGATG
TTGCTGCAAAAATGGCTTCGTAGAAGTGTTTTTGATCATGAGGTTGCAAGTTGGGTAGCCTTGGTTGATAAGCTGAGTACCTTTAATATAAGGAGGGAGGCTGACAAAGT
TGTGTGGACTGCAAAGGGGTCTGGAACTTTCTCCACCAAATCAGCATTTGAAAGCCTTGCCAAGCAATGGCCAAAAATCCACGCCCCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGGAATAGTCCATCGGGCCCATATCATCACCTATCAGGAAGGAAATATGCCATGGAAAGAAACGTCGGCGTCCATGGAAGTTTCTCTCTGGAGATGGCACGT
GCCTTTTACAGGGGTCCATTTGACCCGAAATTCAACAGCATGGACCGATGAAGAATTGAGGATGGACACCATTATCCAATGGGAAAAGCAATACGAGGATGAAAGAGAAG
AGATAGATCAAGTCTCGGAGTTATCATACTCAAGCCCAGACAGCAAGGAAGGGAAAGAAAACGAGATAGAGGGGAGCAATAAGGATAACGGATTCCCAGATGACTTTCAC
CCATGCTTCGACGAAGATGAGCAAGAAACAGGAGAAGGAAGGGAAGGAAACAAGGGGCCCAAGGACTCCCAACTTGCGCAAAAAGATCTGAGAGAGAGGAATATGGAGGA
AAGCTCGAAAGCCCTGACAGTGATTCAAGCGAATGAGTTCAACGAGGGGAAAAAAGCTAGGAGCAATGATGCATATGATTTTGCTATCAGCAAGGAGATGATAGTTTTGT
TGAAGAGACAACCTGTGTGTATAAGATCCGAGGAGAATGAAGCAAAGATGGAGACCCAAGGAGAATACTCTGCTAACTCAGTAGATGTAGAGATGATTAGTTCTAGGAAA
GATGAGGAGACTAGGTTGGATGTAATTGACAGGAAGACTATCAAGTCTATTTGGAGCTCCAGAAACGTTAATTGGGTAGAGCTGGAGGCTGCGAGGACTTCTGGTGGCAT
TCTCATCATGTGGAAAGAGGATATGATTGAGGGGTGCATTCGTAGATGGAACAATGAGGTCTTTGACAATATGATTGATAAAAAGATTGAATGTTTGAACCAAATTGAGA
GGATCGACTTAATAGAGGAGCAGCAGGGTAGTCTTAATTCCCACCTTAAAGAGGAAAGAGTGAAAATCAAATCTAATCTTTTAGACATCACGGTGAAAGAGCAGAAGATG
TTGCTGCAAAAATGGCTTCGTAGAAGTGTTTTTGATCATGAGGTTGCAAGTTGGGTAGCCTTGGTTGATAAGCTGAGTACCTTTAATATAAGGAGGGAGGCTGACAAAGT
TGTGTGGACTGCAAAGGGGTCTGGAACTTTCTCCACCAAATCAGCATTTGAAAGCCTTGCCAAGCAATGGCCAAAAATCCACGCCCCTGGTTAA
Protein sequenceShow/hide protein sequence
MENGIVHRAHIITYQEGNMPWKETSASMEVSLWRWHVPFTGVHLTRNSTAWTDEELRMDTIIQWEKQYEDEREEIDQVSELSYSSPDSKEGKENEIEGSNKDNGFPDDFH
PCFDEDEQETGEGREGNKGPKDSQLAQKDLRERNMEESSKALTVIQANEFNEGKKARSNDAYDFAISKEMIVLLKRQPVCIRSEENEAKMETQGEYSANSVDVEMISSRK
DEETRLDVIDRKTIKSIWSSRNVNWVELEAARTSGGILIMWKEDMIEGCIRRWNNEVFDNMIDKKIECLNQIERIDLIEEQQGSLNSHLKEERVKIKSNLLDITVKEQKM
LLQKWLRRSVFDHEVASWVALVDKLSTFNIRREADKVVWTAKGSGTFSTKSAFESLAKQWPKIHAPG