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Spg032699 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032699
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold11:6700107..6703855
RNA-Seq ExpressionSpg032699
SyntenySpg032699
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]6.2e-2757.02Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        SWISFW+ G + Y KP  R+ KK S   +T NPDG+ I+ HEWS  E+ LF EL I     D+TYLA FLSCWLC F+FP     +RP VF+AASLMA  
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
          +SLA+PVLANIY
Subjt:  KTFSLAIPVLANIY

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]4.2e-3164.04Show/hide
Query:  WISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFP---HHIRPNVFKAASLMAEG
        WISFW  + + +Y KPP R+PKKTSRP +THNP+GT IKR +WS+ E NLF +L +  ++ D+TYLAT LSCWLC FVFP     +RP VFK ASLMAEG
Subjt:  WISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFP---HHIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
         TFSLAIPVL+NIY
Subjt:  KTFSLAIPVLANIY

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]3.6e-2757.89Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        SWISFW+ G + Y KP  R+ KK SR  +T NPDG+ I+  EWS  E+ LF EL I     D+TYLA FLSCWLC FVFP     +RP VF+ ASLMA G
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
          +SLA+PVLANIY
Subjt:  KTFSLAIPVLANIY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.2e-3059.66Show/hide
Query:  ISDCSWISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAAS
        I+   WISFW  + + +Y+KPP R+PKKTSRP +THNPDG  I+R +WS  E  +F +L +   + D+TYLA FLSCWLC FVFP     +RP VFK AS
Subjt:  ISDCSWISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAAS

Query:  LMAEGKTFSLAIPVLANIY
        LMAEG TFSLA+PVLANIY
Subjt:  LMAEGKTFSLAIPVLANIY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.1e-0233.33Show/hide
Query:  ESRVVEEKDALQKQLARSVSEVAYLKAKV------------------AELEDLAHEKLAVSQIREEISDIECAPTISALDVRTLATLHELLESTRDELKA
        E+R++ E +  +++L R  ++ A L+AK+                   EL+   HE   +S+  EEI  +ECAP +  +D + L+TL E LEST +ELK 
Subjt:  ESRVVEEKDALQKQLARSVSEVAYLKAKV------------------AELEDLAHEKLAVSQIREEISDIECAPTISALDVRTLATLHELLESTRDELKA

Query:  LQWNP
         +W P
Subjt:  LQWNP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]4.3e-2836.84Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        +W+SFW+ G + Y K   ++ KK S   +T N DG+ I+  EWS  E+ LF EL I     D+T+LATFLSCWLC FVFP     +RP VF+ ASLMA  
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY-----WVRQN---------------------NSIEEDSQNSTGDRHWKRTKRPKKAS--DLDDKSLMSASNASQASDDIETLLPLN
          +SLA+PVLANIY     W  ++                     N  +++S +S  D HWKR  + +K S  DLD+K      +++    +I  L PLN
Subjt:  KTFSLAIPVLANIY-----WVRQN---------------------NSIEEDSQNSTGDRHWKRTKRPKKAS--DLDDKSLMSASNASQASDDIETLLPLN

Query:  DCVQEEEECSSEQSLTSSDAFASSVKNFGSSHASSSKQVNS---SSLSTKKVPQHTQEKVAALVFE
        D ++   E +S +SLT S A  S  +  G+   S   Q NS     L  ++  +  Q+K+    FE
Subjt:  DCVQEEEECSSEQSLTSSDAFASSVKNFGSSHASSSKQVNS---SSLSTKKVPQHTQEKVAALVFE

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein3.0e-2757.02Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        SWISFW+ G + Y KP  R+ KK S   +T NPDG+ I+ HEWS  E+ LF EL I     D+TYLA FLSCWLC F+FP     +RP VF+AASLMA  
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
          +SLA+PVLANIY
Subjt:  KTFSLAIPVLANIY

A0A5A7U8L3 PMD domain-containing protein3.9e-2757.89Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        SWISFW+ G + Y KP  R+ K  SR  +T NPDG+ I+  EWS  E+ LF EL I     D+TYLA FLSCWLC FVFP     +RP VF+AASLMA G
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
          +SLA+PVLANIY
Subjt:  KTFSLAIPVLANIY

A0A5A7UVA2 Putative mitochondrial protein2.1e-2836.84Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        +W+SFW+ G + Y K   ++ KK S   +T N DG+ I+  EWS  E+ LF EL I     D+T+LATFLSCWLC FVFP     +RP VF+ ASLMA  
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY-----WVRQN---------------------NSIEEDSQNSTGDRHWKRTKRPKKAS--DLDDKSLMSASNASQASDDIETLLPLN
          +SLA+PVLANIY     W  ++                     N  +++S +S  D HWKR  + +K S  DLD+K      +++    +I  L PLN
Subjt:  KTFSLAIPVLANIY-----WVRQN---------------------NSIEEDSQNSTGDRHWKRTKRPKKAS--DLDDKSLMSASNASQASDDIETLLPLN

Query:  DCVQEEEECSSEQSLTSSDAFASSVKNFGSSHASSSKQVNS---SSLSTKKVPQHTQEKVAALVFE
        D ++   E +S +SLT S A  S  +  G+   S   Q NS     L  ++  +  Q+K+    FE
Subjt:  DCVQEEEECSSEQSLTSSDAFASSVKNFGSSHASSSKQVNS---SSLSTKKVPQHTQEKVAALVFE

A0A5D3DAL3 PMD domain-containing protein2.0e-3164.04Show/hide
Query:  WISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFP---HHIRPNVFKAASLMAEG
        WISFW  + + +Y KPP R+PKKTSRP +THNP+GT IKR +WS+ E NLF +L +  ++ D+TYLAT LSCWLC FVFP     +RP VFK ASLMAEG
Subjt:  WISFWF-KGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFP---HHIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
         TFSLAIPVL+NIY
Subjt:  KTFSLAIPVLANIY

A0A5D3DCE5 PMD domain-containing protein1.8e-2757.89Show/hide
Query:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG
        SWISFW+ G + Y KP  R+ KK SR  +T NPDG+ I+  EWS  E+ LF EL I     D+TYLA FLSCWLC FVFP     +RP VF+ ASLMA G
Subjt:  SWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRELKIDMKYIDQTYLATFLSCWLCAFVFPH---HIRPNVFKAASLMAEG

Query:  KTFSLAIPVLANIY
          +SLA+PVLANIY
Subjt:  KTFSLAIPVLANIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATGCTTTGCAGAACACATTGTCTCCAATAAGATGTACCTCGTTCTCTTGAAAGACAACAATCAACCCATAAGAAGTGGGCTCAACTTCTTAGTAGAAGAGTCTAA
GACCGGTCGTCTGGCAGCCCAATGGCCCCCACCACTAAATCTGCATACCATTTCTGATTGCTCTTGGATTTCCTTTTGGTTCAAAGGTGATCAGAGGTACGCAAAGCCTC
CTCAACGGAGACCCAAGAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGGCACAAATATTAAGCGTCACGAGTGGTCAGATGAGGAGAACAACTTGTTTCGCGAG
TTAAAGATTGATATGAAATACATAGACCAAACATACTTGGCGACCTTTTTATCTTGTTGGCTCTGCGCCTTCGTGTTTCCCCACCATATTCGTCCCAACGTTTTTAAAGC
TGCCAGCTTAATGGCCGAGGGGAAAACTTTTAGTCTTGCAATCCCCGTTCTTGCCAACATCTACTGGGTTAGGCAAAACAATTCAATTGAAGAAGATAGTCAAAACAGCA
CTGGAGATCGACATTGGAAAAGAACCAAAAGGCCCAAGAAAGCTTCTGATCTCGATGACAAGTCCCTCATGAGTGCTTCTAATGCTTCACAGGCTTCTGACGACATTGAG
ACTTTGCTTCCTTTAAATGATTGTGTTCAAGAAGAGGAAGAATGTTCAAGCGAGCAATCTTTGACGAGTTCTGATGCTTTCGCTTCTTCCGTGAAGAACTTTGGAAGCTC
TCATGCATCTTCGAGCAAACAAGTGAATTCGTCTTCTCTTTCTACTAAGAAAGTTCCTCAACACACTCAAGAGAAAGTGGCTGCCCTAGTCTTTGAAGTTTCTCAGTTCT
GTGCTGATGATGGACAGTCAGTTGGAGGAAAAAAACTCCATTTAGAGAAAGCTTTGTCTATTGAAAGTCGTGTTGTAGAGGAGAAAGATGCACTTCAGAAACAACTTGCT
CGCTCTGTCTCAGAGGTTGCATATCTAAAGGCCAAAGTTGCAGAACTAGAGGACTTAGCTCATGAAAAACTTGCGGTTTCGCAAATACGTGAGGAGATTAGCGACATCGA
GTGTGCCCCCACCATCAGTGCTTTAGACGTTCGCACCCTAGCAACACTTCATGAACTTTTGGAGAGTACTCGTGACGAGCTGAAAGCACTTCAGTGGAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTATGCTTTGCAGAACACATTGTCTCCAATAAGATGTACCTCGTTCTCTTGAAAGACAACAATCAACCCATAAGAAGTGGGCTCAACTTCTTAGTAGAAGAGTCTAA
GACCGGTCGTCTGGCAGCCCAATGGCCCCCACCACTAAATCTGCATACCATTTCTGATTGCTCTTGGATTTCCTTTTGGTTCAAAGGTGATCAGAGGTACGCAAAGCCTC
CTCAACGGAGACCCAAGAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGGCACAAATATTAAGCGTCACGAGTGGTCAGATGAGGAGAACAACTTGTTTCGCGAG
TTAAAGATTGATATGAAATACATAGACCAAACATACTTGGCGACCTTTTTATCTTGTTGGCTCTGCGCCTTCGTGTTTCCCCACCATATTCGTCCCAACGTTTTTAAAGC
TGCCAGCTTAATGGCCGAGGGGAAAACTTTTAGTCTTGCAATCCCCGTTCTTGCCAACATCTACTGGGTTAGGCAAAACAATTCAATTGAAGAAGATAGTCAAAACAGCA
CTGGAGATCGACATTGGAAAAGAACCAAAAGGCCCAAGAAAGCTTCTGATCTCGATGACAAGTCCCTCATGAGTGCTTCTAATGCTTCACAGGCTTCTGACGACATTGAG
ACTTTGCTTCCTTTAAATGATTGTGTTCAAGAAGAGGAAGAATGTTCAAGCGAGCAATCTTTGACGAGTTCTGATGCTTTCGCTTCTTCCGTGAAGAACTTTGGAAGCTC
TCATGCATCTTCGAGCAAACAAGTGAATTCGTCTTCTCTTTCTACTAAGAAAGTTCCTCAACACACTCAAGAGAAAGTGGCTGCCCTAGTCTTTGAAGTTTCTCAGTTCT
GTGCTGATGATGGACAGTCAGTTGGAGGAAAAAAACTCCATTTAGAGAAAGCTTTGTCTATTGAAAGTCGTGTTGTAGAGGAGAAAGATGCACTTCAGAAACAACTTGCT
CGCTCTGTCTCAGAGGTTGCATATCTAAAGGCCAAAGTTGCAGAACTAGAGGACTTAGCTCATGAAAAACTTGCGGTTTCGCAAATACGTGAGGAGATTAGCGACATCGA
GTGTGCCCCCACCATCAGTGCTTTAGACGTTCGCACCCTAGCAACACTTCATGAACTTTTGGAGAGTACTCGTGACGAGCTGAAAGCACTTCAGTGGAATCCTTAA
Protein sequenceShow/hide protein sequence
MVCFAEHIVSNKMYLVLLKDNNQPIRSGLNFLVEESKTGRLAAQWPPPLNLHTISDCSWISFWFKGDQRYAKPPQRRPKKTSRPSTTHNPDGTNIKRHEWSDEENNLFRE
LKIDMKYIDQTYLATFLSCWLCAFVFPHHIRPNVFKAASLMAEGKTFSLAIPVLANIYWVRQNNSIEEDSQNSTGDRHWKRTKRPKKASDLDDKSLMSASNASQASDDIE
TLLPLNDCVQEEEECSSEQSLTSSDAFASSVKNFGSSHASSSKQVNSSSLSTKKVPQHTQEKVAALVFEVSQFCADDGQSVGGKKLHLEKALSIESRVVEEKDALQKQLA
RSVSEVAYLKAKVAELEDLAHEKLAVSQIREEISDIECAPTISALDVRTLATLHELLESTRDELKALQWNP