; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032704 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032704
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:8264241..8271030
RNA-Seq ExpressionSpg032704
SyntenySpg032704
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4268750.1 unnamed protein product [Prunus armeniaca]6.1e-1636.24Show/hide
Query:  AHLENILQENETYWQKRSCELWLKDGDQ------------------------------GQSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEM
        A L++++ +NE YW++RS  LWLK GD+                               + ++   V  YF+ +F+++G  + D+E +   +  RVS EM
Subjt:  AHLENILQENETYWQKRSCELWLKDGDQ------------------------------GQSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEM

Query:  NQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS
        N++LL  F A E+  AL + HP+KAPGPDG S  FY+Q+ DVVG DV+S
Subjt:  NQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS

XP_015382608.1 uncharacterized protein LOC107175577 [Citrus sinensis]3.2e-1732.93Show/hide
Query:  GLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGDQG-------------QSKVVGV-----------------VCDYFEHIFTNSGASSHDF
        G+QY S R+     +  ++NI+ + E YW++RS   WLK+GD+              ++++ G+                  C+YF  +FT +  S +  
Subjt:  GLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGDQG-------------QSKVVGV-----------------VCDYFEHIFTNSGASSHDF

Query:  EVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV
        E +L+ + PRVS +MN+ L KPF A E+  AL +  P KAPGPDGL  +FY++H   V   V++ C+
Subjt:  EVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV

XP_021838584.1 uncharacterized protein LOC110778326 [Spinacia oleracea]2.3e-1534.48Show/hide
Query:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ
        L+ +L   ET W++RS  + L++GDQ                                 +V GV  +YF+++FT    + H+FEV L  ++ RV+ E+NQ
Subjt:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ

Query:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDV
        EL++PF  GE+  AL + HP+KAPGPDG++ +F++++  +VG DV
Subjt:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDV

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.2e-1833.7Show/hide
Query:  RIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGD------------------------------QGQSKVVGVVCDYF
        R+  A   ++SAI  L +   RE F  A  ++  +L+E E +W++RS +LW K GD                              + + KVVG++  YF
Subjt:  RIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGD------------------------------QGQSKVVGVVCDYF

Query:  EHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV
          +F++S  S    E +   +E RVS   N +LLKPFC  E+++AL + HP+KA GPD  S +FYK    +VG DV   C+
Subjt:  EHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]4.7e-1633.55Show/hide
Query:  TAKAHLENILQENETYWQKRSCELWLKDGDQG-------------QSKVVGVV-----------------CDYFEHIFTNSGASSHDFEVILRDVEPRVS
        + +  +E +L + E YW++RS   WLK+GD+              ++++ GV+                 C+YF  +FT S  S    E  L  ++PRV+
Subjt:  TAKAHLENILQENETYWQKRSCELWLKDGDQG-------------QSKVVGVV-----------------CDYFEHIFTNSGASSHDFEVILRDVEPRVS

Query:  VEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV
        +EMN +L  PF   E+  AL +  P KAPGPDGL  +F+++H D V   VIS C+
Subjt:  VEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein7.3e-1528.96Show/hide
Query:  KGTGRIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVV
        K   RI E   +++  ++ +    L       +  + ++L++ E +W++RS   W++DGDQ                               Q KV  + 
Subjt:  KGTGRIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVV

Query:  CDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISN
         +YF +IFT+S   S   +  L  VE  V+ +MN  LL+ F   E+  AL + +P KAPGPDG+S  FY+ + ++VGP+V++N
Subjt:  CDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISN

A0A2N9GF83 CCHC-type domain-containing protein2.5e-1533.33Show/hide
Query:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ
        L  +L++ E YWQ+RS   W+K+GD+                               ++KV  +  DYF++IF++S  +       +  +E  V+ EMN 
Subjt:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ

Query:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS
         LL  F A E++ ALK+ +P KAPGPDG+S  FY+ + D+VGP+++S
Subjt:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS

A0A6J1DAR4 uncharacterized protein LOC1110189541.1e-1833.7Show/hide
Query:  RIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGD------------------------------QGQSKVVGVVCDYF
        R+  A   ++SAI  L +   RE F  A  ++  +L+E E +W++RS +LW K GD                              + + KVVG++  YF
Subjt:  RIPEATPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGD------------------------------QGQSKVVGVVCDYF

Query:  EHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV
          +F++S  S    E +   +E RVS   N +LLKPFC  E+++AL + HP+KA GPD  S +FYK    +VG DV   C+
Subjt:  EHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCV

A0A6J5TXB8 Reverse transcriptase domain-containing protein2.9e-1636.24Show/hide
Query:  AHLENILQENETYWQKRSCELWLKDGDQ------------------------------GQSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEM
        A L++++ +NE YW++RS  LWLK GD+                               + ++   V  YF+ +F+++G  + D+E +   +  RVS EM
Subjt:  AHLENILQENETYWQKRSCELWLKDGDQ------------------------------GQSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEM

Query:  NQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS
        N++LL  F A E+  AL + HP+KAPGPDG S  FY+Q+ DVVG DV+S
Subjt:  NQELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS

M5WDR3 Reverse transcriptase domain-containing protein (Fragment)5.6e-1532.65Show/hide
Query:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ
        L++++ +NE YW++RS   WLK GD+                               +  +   V +YF+H+F+++G+S  ++  ++  V  RV+ EMNQ
Subjt:  LENILQENETYWQKRSCELWLKDGDQG------------------------------QSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQ

Query:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS
         LL  F   E+ +AL + HP+KAPGPDG S  FY+++  +VG DV++
Subjt:  ELLKPFCAGELMLALKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGTGAATTTTACCCAAATATTGATGAAGACGAGGGTTTTCAGGCAATTGTCCGTGGAGTAGCGGTAGACTGGAGCCCAGTGGGAATTGAGGGGGCTCAATGGCG
GCTGTCGAAGACAGAAAAAAGGACCTTCCAAGCGGCCTATCTGAAGAGTGAGGCAAACCCTTGGTTAGAATTTGTCAAGCTGCGTCTACTGCCAACAACCCACAATTCTA
CTGTCTCCCGTGATCGCGTTCTCTTGGTTTTTTCTATTTTGAGAAGATGTTATCCTGATGGACAAGGGAATAATAGACATAGCGAACCTAGCGAGGCTTCAGAGGACTCA
GGAAGCGCGCTAAGGCGGTTTGAAACCTTTTGCTTGAGCATTCCTTCTACCTCCTCCTGCGCCACTTCACGTGCATCAAGAAGTTCTGAGCAGTGCTTGGTTTTGCAGGA
TGCTCAGGTTGATTTAAGGGACGTGTGGCTTGTAATCACACTAGACCATTATGTGTTGGTGAACGCTAGTGACCAAGTTAGGGATAACCAGTTGCCTAGTGGTCGATCGT
GTGGAGTGTATTATATGCTTAGTATGACAGAGTTTGCTCTGCTGTACGTATCGAGAAGGCTCTACGCCGGTATGACTAGAGACAAGGGTACAGGACGGATCCCTGAGGCT
ACTCCGAAGGTGCGATCTGCTATTGCGGGGCTACAGTACTGTTCTTTGAGAGAACCTTTTTTTACTGCTAAAGCTCACCTTGAGAATATTTTGCAGGAGAATGAGACATA
TTGGCAAAAGCGATCCTGTGAATTATGGCTGAAGGATGGAGATCAGGGGCAGTCAAAGGTTGTGGGTGTGGTCTGTGATTATTTTGAACATATTTTCACCAATTCCGGGG
CGAGTAGCCATGATTTTGAGGTGATTTTAAGGGATGTGGAGCCACGAGTGAGTGTGGAAATGAATCAAGAGTTGTTAAAGCCTTTTTGTGCAGGGGAGCTTATGCTTGCT
CTTAAAAAGAATCATCCGAATAAGGCCCCGGGTCCTGATGGTCTGTCTGGGTCTTTCTATAAGCAACATTTGGATGTTGTTGGGCCAGATGTGATTAGTAATTGTGTGGT
TGTGTTTGTAGCCACCTATTTTTGCCCGACTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGTGAATTTTACCCAAATATTGATGAAGACGAGGGTTTTCAGGCAATTGTCCGTGGAGTAGCGGTAGACTGGAGCCCAGTGGGAATTGAGGGGGCTCAATGGCG
GCTGTCGAAGACAGAAAAAAGGACCTTCCAAGCGGCCTATCTGAAGAGTGAGGCAAACCCTTGGTTAGAATTTGTCAAGCTGCGTCTACTGCCAACAACCCACAATTCTA
CTGTCTCCCGTGATCGCGTTCTCTTGGTTTTTTCTATTTTGAGAAGATGTTATCCTGATGGACAAGGGAATAATAGACATAGCGAACCTAGCGAGGCTTCAGAGGACTCA
GGAAGCGCGCTAAGGCGGTTTGAAACCTTTTGCTTGAGCATTCCTTCTACCTCCTCCTGCGCCACTTCACGTGCATCAAGAAGTTCTGAGCAGTGCTTGGTTTTGCAGGA
TGCTCAGGTTGATTTAAGGGACGTGTGGCTTGTAATCACACTAGACCATTATGTGTTGGTGAACGCTAGTGACCAAGTTAGGGATAACCAGTTGCCTAGTGGTCGATCGT
GTGGAGTGTATTATATGCTTAGTATGACAGAGTTTGCTCTGCTGTACGTATCGAGAAGGCTCTACGCCGGTATGACTAGAGACAAGGGTACAGGACGGATCCCTGAGGCT
ACTCCGAAGGTGCGATCTGCTATTGCGGGGCTACAGTACTGTTCTTTGAGAGAACCTTTTTTTACTGCTAAAGCTCACCTTGAGAATATTTTGCAGGAGAATGAGACATA
TTGGCAAAAGCGATCCTGTGAATTATGGCTGAAGGATGGAGATCAGGGGCAGTCAAAGGTTGTGGGTGTGGTCTGTGATTATTTTGAACATATTTTCACCAATTCCGGGG
CGAGTAGCCATGATTTTGAGGTGATTTTAAGGGATGTGGAGCCACGAGTGAGTGTGGAAATGAATCAAGAGTTGTTAAAGCCTTTTTGTGCAGGGGAGCTTATGCTTGCT
CTTAAAAAGAATCATCCGAATAAGGCCCCGGGTCCTGATGGTCTGTCTGGGTCTTTCTATAAGCAACATTTGGATGTTGTTGGGCCAGATGTGATTAGTAATTGTGTGGT
TGTGTTTGTAGCCACCTATTTTTGCCCGACTTATTAA
Protein sequenceShow/hide protein sequence
MVREFYPNIDEDEGFQAIVRGVAVDWSPVGIEGAQWRLSKTEKRTFQAAYLKSEANPWLEFVKLRLLPTTHNSTVSRDRVLLVFSILRRCYPDGQGNNRHSEPSEASEDS
GSALRRFETFCLSIPSTSSCATSRASRSSEQCLVLQDAQVDLRDVWLVITLDHYVLVNASDQVRDNQLPSGRSCGVYYMLSMTEFALLYVSRRLYAGMTRDKGTGRIPEA
TPKVRSAIAGLQYCSLREPFFTAKAHLENILQENETYWQKRSCELWLKDGDQGQSKVVGVVCDYFEHIFTNSGASSHDFEVILRDVEPRVSVEMNQELLKPFCAGELMLA
LKKNHPNKAPGPDGLSGSFYKQHLDVVGPDVISNCVVVFVATYFCPTY