CuGenDBv2

Gene ID	Spg032706
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	scaffold11:8401709..8404477
RNA-Seq Expression	Spg032706
Synteny	Spg032706
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBN69274.1 TatD related DNase [Prunus dulcis]

2.0e-32

31.41

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRLY L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN  +A   N                                                     L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V     S IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C  C ++AEN+DHLF+HC ++ K W  +   LG  +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

CAN75156.1 hypothetical protein VITISV_042643 [Vitis vinifera]

4.6e-32

27.38

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Query:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK
        N ALL KWL RF  + + LWH++I   YG+HP  W  +  ++ + R PWK I+      + F+   +GN E   F ED W G++ LCA F  LY +S ++
Subjt:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK

Query:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG
        N +V+ VL                                                  + F L W                                 R 
Subjt:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG

Query:  LFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL
        L + EI     L+  +  V L     D  +W L  SG +S KS F  L++ S  +    +  +W  K P KVK   W +A+  +NT++KLQ +    +L 
Subjt:  LFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL

Query:  PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD
        P  C +C ++ E++DHLFLHC      W  +  L+G+ +  P+ I+D
Subjt:  PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD

CAN75609.1 hypothetical protein VITISV_002943 [Vitis vinifera]

2.7e-32

27.38

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Query:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK
        N ALL KWL RF  + + LWH++I   YG+HP  W  +  ++ + R PWK I+      + F+   +GN E   F ED W G++ LCA F  LY +S ++
Subjt:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK

Query:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG
        N +V+ VL                                                  + F L W                                 R 
Subjt:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG

Query:  LFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL
        L + EI  +  L+  +  V L     D  +W L  SG +S KS F  L++ S  +    +  +W  K P KVK   W +A+  +NT++KLQ +    +L 
Subjt:  LFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL

Query:  PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD
        P  C +C ++ E++DHLFLHC      W  +  L+G+ +  P+ I+D
Subjt:  PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD

RVW91473.1 hypothetical protein CK203_038540 [Vitis vinifera]

2.7e-32

27.75

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Query:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGG-IKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK
        N ALL KWL R+  + + LWH++I+  YGSH   W +   ++ + R PWK I+      + F  + +GNRE   F ED W GD+PL   +PRL+ + + K
Subjt:  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGG-IKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMK

Query:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG
        N S++ VL      P+S+                            +F   L +   E +  L+W   DL                              
Subjt:  NHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRG

Query:  LFEREIPSWLALLDKIKDVRLLDEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLP
                   L   + D RL        W L  SG++S KS F  L++ S       S ++W  + P K K F+W +A++ +NT++ LQ +    +L P
Subjt:  LFEREIPSWLALLDKIKDVRLLDEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLP

Query:  SACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD
          C +C+K  E+ DHLFLHC      W  + +L  + +  P+ I D
Subjt:  SACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]

2.0e-32

31.49

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRL  L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN S+A   N                                                     L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISF
          L PS C +C ++AEN+DHLF+HC ++ K W  +   LG+ +
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISF

TrEMBL top hits

e value

%identity

Alignment

A0A5H2XQW2 TatD related DNase

9.9e-33

31.41

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRLY L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN  +A   N                                                     L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V     S IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C  C ++AEN+DHLF+HC ++ K W  +   LG  +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

M5VH03 zf-RVT domain-containing protein (Fragment)

3.1e-34

31.99

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRL  L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN S+A                                             C  N     +  L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C +C ++AEN+DHLF+HC ++ K W  +   LG+ +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)

4.5e-33

31.41

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  + N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRL  L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN S+A                                             C  N     +  L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++++ G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C +C ++AEN+DHLF+HC ++ + W  +   LG+ +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)

4.0e-34

31.99

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRL  L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN S+A                                             C  N     +  L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C +C ++AEN+DHLFLHC ++ + W  +   LG+ +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

M5XV38 zf-RVT domain-containing protein

6.9e-34

31.7

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Query:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL
        LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS    S       S+GN E+  F ED W+ +  L   FPRL  L
Subjt:  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHL

Query:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL
        S  KN S+A                                             C  N     +  L W   D D                         
Subjt:  SLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAIL

Query:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN
          R L E EI   + LLD + +VRL   + D  SW++E+ G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Subjt:  LGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN

Query:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK
          L PS C +C ++AEN+DHLF+HC ++ + W  +   LG+ +  PK
Subjt:  WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

2.4e-07

28.57

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Query:  QDHLSWKLEKSGIYSTKSMFQLLTRPS-PKVNQAT-SSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEF
        +D LSWK  + G +S +S +++LT    P+ N A+  + +WK + P++VK FLW +  +++ T+E+  ++  + S   + C++C    E++ H+   C  
Subjt:  QDHLSWKLEKSGIYSTKSMFQLLTRPS-PKVNQAT-SSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEF

Query:  ASKAW
            W
Subjt:  ASKAW

Arabidopsis top hits

e value

%identity

Alignment

AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

5.6e-04

31.53

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Query:  LLDEQDHLSWKLEK---SGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSL-LPSACRMCLKDAENLDHL
        L  E D   W +E    +G  S K+   L  RP   V     ++ +K  +PK     +W      L T  +L    ++W + L + C +C  D E+ DHL
Subjt:  LLDEQDHLSWKLEK---SGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSL-LPSACRMCLKDAENLDHL

Query:  FLHCEFASKAW
        FL CEFA   W
Subjt:  FLHCEFASKAW

AT3G25270.1 Ribonuclease H-like superfamily protein

8.6e-05

33.33

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Query:  IWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEFASKAW
        IWK K+  K+K FLW L   +L T + L+++          C  C ++ E   HLF  C +A + W
Subjt:  IWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEFASKAW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGAAATTTCCTCTTCCCGATGATGAAAAACAAGGTTCCAAGAATCAACCTTTGAGGGCTTGCAACAAAGCTTTGTTGGTGAAATGGTTAAGGCGGTTCTCCACCGA
TTCCAACACCCTCTGGCATAGGATCATTGTTAGAAAATACGGTTCTCATCCTCTCGAATGGGTGTCGGGTGGGATCAAAGGCACTTCTAGAAACCCTTGGAAAGAGATCT
CTTTAGAGCTCCCTTCGATGACTGCTTTTATTTCACACTCTTTGGGAAACAGGGAGGAAACTTATTTCTTGGAGGATAGATGGGTGGGGGATAGACCTCTCTGTGCTGCT
TTTCCTCGACTTTATCACTTATCTTTGATGAAAAATCACTCTGTGGCAGAGGTTCTCAATCTTTTTGGGGGCACTCCTTATTCTTTTGGCTGCGAAACTATGGATATCCT
GGCTCTCCTTTCTCTGATAGGGGAAGTCACCTTTAGACTGGATAGGAGGGATTGTTGCCGCTCTTTTTTTCATTGCCTCTTGAATCCGACTGAGGAGTCAATCTTTTCCT
TGATATGGAAGGATGCCGACCTTGATCGGCTCGTTTTGTTTGTATCCTTTGCTGGATGGCAAGGGAAGACCTTGATCACATGTTATGGAGATGCAATTTTGCTAGGTCGG
GGCCTTTTTGAAAGAGAGATTCCTAGTTGGTTGGCCTTGCTGGACAAAATTAAGGATGTGAGGCTGCTGGACGAGCAAGACCACTTGAGTTGGAAGTTGGAGAAGTCAGG
TATTTACTCGACCAAATCTATGTTTCAATTGTTGACTCGTCCATCCCCTAAAGTGAATCAAGCCACTAGTTCGTTGATATGGAAGCATAAAAGCCCTAAGAAGGTGAAGG
TGTTCCTCTGGTCCCTTGCTTACAGAAGCCTTAATACTGATGAAAAGCTTCAAAAAAAATTCAGCAATTGGTCCCTTCTCCCCTCGGCTTGCAGGATGTGTTTGAAAGAT
GCAGAAAACTTGGACCACCTCTTTTTGCATTGTGAGTTCGCTAGTAAAGCTTGGTGTTTTGTTGCTAAGCTTCTGGGTATTTCGTTTTGTGCCCCTAAGAAGATCGATGA
TTGTCAAGAGGAAGGCTAG

mRNA sequence

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Protein sequence

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MQKFPLPDDEKQGSKNQPLRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAA
FPRLYHLSLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGR
GLFEREIPSWLALLDKIKDVRLLDEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKD
AENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDDCQEEG

Spg032706 (gene) of Sponge gourd (cylindrica) v1 genome