; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032714 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032714
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:5881567..5882793
RNA-Seq ExpressionSpg032714
SyntenySpg032714
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]5.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
VVA13439.1 Hypothetical predicted protein, partial [Prunus dulcis]5.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
VVA20721.1 Hypothetical predicted protein, partial [Prunus dulcis]5.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GC  EVG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]5.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]5.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 22.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)2.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)2.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
A0A5H2XKI7 VIRB2-interacting protein 22.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
A0A5H2Y6K0 VIRB2-interacting protein 22.9e-0550Show/hide
Query:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
        V    D   V+  A   GCD  VG +   +LGLPLG NPR I FWDP+VEK E  L
Subjt:  VAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCATGCCAATGTGCGGTTGCAGCAACAAGGGACCCCATTAAGGTGGATAGATGGGCGAATTTGGTGGGTTGTGACTATGAGGTTGGTACCTTCTCTTCATCATT
TTTAGGGCTTCCTCTTGGCCATAACCCAAGAACTATCCCCTTTTGGGATCCTATCGTAGAGAAGGCGGAGGAAGATCTCGATCACTTGCTTTGGGGTGCAATTTTGCTCG
TTCTGTTTGGTGTCTCTTTTTTGACGAGTCTGGCTTCCAATTTGCCAAACACCATGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCATGCCAATGTGCGGTTGCAGCAACAAGGGACCCCATTAAGGTGGATAGATGGGCGAATTTGGTGGGTTGTGACTATGAGGTTGGTACCTTCTCTTCATCATT
TTTAGGGCTTCCTCTTGGCCATAACCCAAGAACTATCCCCTTTTGGGATCCTATCGTAGAGAAGGCGGAGGAAGATCTCGATCACTTGCTTTGGGGTGCAATTTTGCTCG
TTCTGTTTGGTGTCTCTTTTTTGACGAGTCTGGCTTCCAATTTGCCAAACACCATGGAGTAA
Protein sequenceShow/hide protein sequence
MGSCQCAVAATRDPIKVDRWANLVGCDYEVGTFSSSFLGLPLGHNPRTIPFWDPIVEKAEEDLDHLLWGAILLVLFGVSFLTSLASNLPNTME