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Spg032732 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032732
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold11:5657224..5659314
RNA-Seq ExpressionSpg032732
SyntenySpg032732
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045358.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-2436.76Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA++ +FD WV+ HP+A+GL N+PF++F  L++VFG+ +ATG   +T V+M  +   D +E +M+++ E+  +PNP  + P  GED+ +TLTS  
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENGFQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFPPKWKYDYCMEVFGREP
         + G           S  P+ K               Q+ P   + D    T +LL D TML  F+D+P +W Y  CM + GR+P
Subjt:  AENGFQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFPPKWKYDYCMEVFGREP

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T ++M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+D+P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.3e-2738.1Show/hide
Query:  KCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKAAE
        KCIE +K +FD WV+ HP+A+GL N+PF +F  L++VFG+DRATG   +T V+M+ +   D +E +M+++ E+  +PNP  + P  GED+ +T TS   +
Subjt:  KCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKAAE

Query:  NG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D TML  F+D+P
Subjt:  NG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]7.4e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T V+M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+++P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]2.5e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T ++M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+D+P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992481.2e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T ++M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+D+P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

A0A5A7TR69 Retrotransposon protein8.3e-2536.76Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA++ +FD WV+ HP+A+GL N+PF++F  L++VFG+ +ATG   +T V+M  +   D +E +M+++ E+  +PNP  + P  GED+ +TLTS  
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENGFQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFPPKWKYDYCMEVFGREP
         + G           S  P+ K               Q+ P   + D    T +LL D TML  F+D+P +W Y  CM + GR+P
Subjt:  AENGFQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFPPKWKYDYCMEVFGREP

A0A5A7VGQ0 Retrotransposon protein1.2e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T ++M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+D+P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

A0A5D3C7T4 Uncharacterized protein6.1e-2838.1Show/hide
Query:  KCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKAAE
        KCIE +K +FD WV+ HP+A+GL N+PF +F  L++VFG+DRATG   +T V+M+ +   D +E +M+++ E+  +PNP  + P  GED+ +T TS   +
Subjt:  KCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKAAE

Query:  NG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D TML  F+D+P
Subjt:  NG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

A0A5D3CKC1 Retrotransposon protein3.6e-2838.22Show/hide
Query:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA
        E KCIEA+K +FD WV+ HP+A+GL N+ F +F  L ++FG+DRATG   +T V+M L++  D +E +M+++ E+  +PNP  + P  GED+S+T TS A
Subjt:  EYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDE-NMNVDFENCYVPNPPIVNPTMGEDISTTLTSKA

Query:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP
         + G                       + T  +I KI+ W   K E+E +  K LY ELQ IP + + D L++  +LL D  ML  F+++P
Subjt:  AENG----------------------FQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATTCTGCGGATGGCGAGCCAACAATGGGACATTCAGGCCAGGATTTCAGAGATTATGGGGCCAGCGTGCAGTGGGTTCGAGTGGAACATGAGTATAAATGCAT
CGAGGCTAAGAAGAAGATTTTTGATGCATGGGTCGAGGATCACCCACACGCTAAGGGCCTCCGAAACAGGCCATTTTCTTGGTTTAATGGATTAGACATGGTATTCGGAA
AGGATAGAGCAACGGGGATAGCAGCCCGCACTCTAGTTGACATGGCACTAGAACTTGTAACCGATTTGGACGAGAACATGAACGTTGACTTTGAAAATTGCTATGTCCCC
AATCCACCTATTGTTAATCCCACCATGGGGGAGGACATCAGCACAACACTGACGAGCAAAGCAGCTGAGAATGGGTTCCAATTGACACGATCTCAGATTGAAAAAATTTC
ATTATGGCCGACGAACAAGGACGAGATGGAATGGAACCGTCGAAAGGAGTTGTATGTAGAGTTGCAAAACATCCCAAGGGTGTCTATGCAAGATGGTCTGGTGATCACAA
GAGCTTTACTGTCTGATTTAACCATGCTGACTCACTTCATGGACTTCCCTCCGAAGTGGAAGTACGACTACTGCATGGAAGTTTTTGGGAGAGAGCCCCGACAGCCTAGC
CCAACCTTGATCCTAGCCTCCGTTCATTCAAAAAAATTGAAGCTTGTTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATATATTCTGCGGATGGCGAGCCAACAATGGGACATTCAGGCCAGGATTTCAGAGATTATGGGGCCAGCGTGCAGTGGGTTCGAGTGGAACATGAGTATAAATGCAT
CGAGGCTAAGAAGAAGATTTTTGATGCATGGGTCGAGGATCACCCACACGCTAAGGGCCTCCGAAACAGGCCATTTTCTTGGTTTAATGGATTAGACATGGTATTCGGAA
AGGATAGAGCAACGGGGATAGCAGCCCGCACTCTAGTTGACATGGCACTAGAACTTGTAACCGATTTGGACGAGAACATGAACGTTGACTTTGAAAATTGCTATGTCCCC
AATCCACCTATTGTTAATCCCACCATGGGGGAGGACATCAGCACAACACTGACGAGCAAAGCAGCTGAGAATGGGTTCCAATTGACACGATCTCAGATTGAAAAAATTTC
ATTATGGCCGACGAACAAGGACGAGATGGAATGGAACCGTCGAAAGGAGTTGTATGTAGAGTTGCAAAACATCCCAAGGGTGTCTATGCAAGATGGTCTGGTGATCACAA
GAGCTTTACTGTCTGATTTAACCATGCTGACTCACTTCATGGACTTCCCTCCGAAGTGGAAGTACGACTACTGCATGGAAGTTTTTGGGAGAGAGCCCCGACAGCCTAGC
CCAACCTTGATCCTAGCCTCCGTTCATTCAAAAAAATTGAAGCTTGTTATCTAA
Protein sequenceShow/hide protein sequence
MIYSADGEPTMGHSGQDFRDYGASVQWVRVEHEYKCIEAKKKIFDAWVEDHPHAKGLRNRPFSWFNGLDMVFGKDRATGIAARTLVDMALELVTDLDENMNVDFENCYVP
NPPIVNPTMGEDISTTLTSKAAENGFQLTRSQIEKISLWPTNKDEMEWNRRKELYVELQNIPRVSMQDGLVITRALLSDLTMLTHFMDFPPKWKYDYCMEVFGREPRQPS
PTLILASVHSKKLKLVI