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Spg032736 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032736
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold11:7822100..7828194
RNA-Seq ExpressionSpg032736
SyntenySpg032736
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4278097.1 unnamed protein product [Prunus armeniaca]3.7e-0645.95Show/hide
Query:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        RR + L L+PLDPEIERT    N+L+R     ++  +P  EEPKP+RDY  P      S I +  I+ANNFE++
Subjt:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]3.1e-0546.58Show/hide
Query:  MRRVRELALVPLDPEIERTYNRLRRENQENIQMTNPNPEE-PKPIRDYFQPVFQEQQSGILYAPINANNFELK
        MRR R   ++P+DPEIERT   LRR   + + M   + E  P+ ++DY +PV     S I+  PINANNFELK
Subjt:  MRRVRELALVPLDPEIERTYNRLRRENQENIQMTNPNPEE-PKPIRDYFQPVFQEQQSGILYAPINANNFELK
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.7e-0656.25Show/hide
Query:  LVPLDPEIERTYNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        L+PLDPEI+RTY R  R      Q T    E PK IRDYFQP     Q GI+  PIN NNFELK
Subjt:  LVPLDPEIERTYNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
XP_020415481.1 uncharacterized protein LOC109948004 [Prunus persica]4.1e-0545.95Show/hide
Query:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        RR + L LVPLDPEIERT    N+L+R     ++  +P  EE KP+RDY  P      S I    I+ANNFE++
Subjt:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
XP_038906874.1 uncharacterized protein LOC120092758 [Benincasa hispida]1.9e-0745.95Show/hide
Query:  LCMRRVRELALVPLDPEIERTYNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        LCMRR+++  LV  DPE ER   R+ R+ +    +     E  + IRDYF+PV    Q GI   PINA+NFELK
Subjt:  LCMRRVRELALVPLDPEIERTYNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
TrEMBL top hitse value%identityAlignment
A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129456.3e-0441.38Show/hide
Query:  MRRVRELALVPLDPEIERTYNRLRRENQE----NIQMTNPN-----------PEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        M+R   L LVP DP+IERT+ R RREN +    N  M   N           PE  + +RDY  P+ Q     I    INANNFE+K
Subjt:  MRRVRELALVPLDPEIERTYNRLRRENQE----NIQMTNPN-----------PEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
A0A6J0ZYV0 uncharacterized protein LOC1104134138.3e-0441.38Show/hide
Query:  MRRVRELALVPLDPEIERTYNRLRRENQE----NIQMTNPN-----------PEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        M+R   L LVP DP+IERT+ R RREN +    N  M   N           PE  + +RDY  P+ Q     I    INANNFE+K
Subjt:  MRRVRELALVPLDPEIERTYNRLRRENQE----NIQMTNPN-----------PEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
A0A6J5UQP9 Retrotrans_gag domain-containing protein1.8e-0645.95Show/hide
Query:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
        RR + L L+PLDPEIERT    N+L+R     ++  +P  EEPKP+RDY  P      S I +  I+ANNFE++
Subjt:  RRVRELALVPLDPEIERT---YNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAAATGGGACAGAGGGCGACCCTCTGAAGGTCGAGACCGAGCACAACTTGTCGTGGCCAACCCTAAACTTTAAAGAACGAAAAAGATTCAAGTTAGAAGAAGC
CAAAAGAGAGCCATCTGCAGACCAGCGTCGGGACGCTGCTCTTGGAGCGTCTCGACGCTGCCTTTCCTTTTCTGATTTAGGCGGCAAAAGTCCAATTGGTGGGATTTTAG
CCCTAATTTCGACTAGAGACCTTCTGTGGGAGCTGAAGGCAAGGCCAAGGAGCGGGAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACACCCCAAAGGAAGTTAGT
GAGGTGGGATCCACTTCATTAGGATGTCTAGTGAGTCATGTGGCCGATGATTCATTCGCACCTATCCAGGAGCATAATTCTTTCGATTTTGCTATGGTTGAGCATTTAGG
GGTGAGTTGCATGAATAGTGGGGAAGAATTGGAGAGTTGTAGCACCTATCAAGAGCATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGG
AGGTAGAGTTTGAGGTTGAAAAGCTTTCGTCTGTTTTATCTTCTTCATCCTTTGTAGATTTTGATTGTCCTTTTTTCTATTCTCACGAGTCAGTTATAGAGCGGCAAAAG
GTCGGATTGTGCATGCGAAGGGTTAGAGAGTTGGCCTTAGTTCCCTTAGATCCAGAGATAGAAAGAACATACAATAGACTTCGAAGGGAAAATCAAGAAAATATCCAAAT
GACCAATCCTAATCCTGAGGAGCCTAAGCCTATTAGGGACTACTTTCAGCCGGTCTTTCAGGAGCAACAATCAGGGATTCTCTATGCCCCGATCAATGCTAACAACTTTG
AGCTGAAAACGTTCAGAAAAAGTTTTGAACAACTGATGTGGAATTTTCCTACTGCAAGTGTACGGGTCAAGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAAATGGGACAGAGGGCGACCCTCTGAAGGTCGAGACCGAGCACAACTTGTCGTGGCCAACCCTAAACTTTAAAGAACGAAAAAGATTCAAGTTAGAAGAAGC
CAAAAGAGAGCCATCTGCAGACCAGCGTCGGGACGCTGCTCTTGGAGCGTCTCGACGCTGCCTTTCCTTTTCTGATTTAGGCGGCAAAAGTCCAATTGGTGGGATTTTAG
CCCTAATTTCGACTAGAGACCTTCTGTGGGAGCTGAAGGCAAGGCCAAGGAGCGGGAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACACCCCAAAGGAAGTTAGT
GAGGTGGGATCCACTTCATTAGGATGTCTAGTGAGTCATGTGGCCGATGATTCATTCGCACCTATCCAGGAGCATAATTCTTTCGATTTTGCTATGGTTGAGCATTTAGG
GGTGAGTTGCATGAATAGTGGGGAAGAATTGGAGAGTTGTAGCACCTATCAAGAGCATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGG
AGGTAGAGTTTGAGGTTGAAAAGCTTTCGTCTGTTTTATCTTCTTCATCCTTTGTAGATTTTGATTGTCCTTTTTTCTATTCTCACGAGTCAGTTATAGAGCGGCAAAAG
GTCGGATTGTGCATGCGAAGGGTTAGAGAGTTGGCCTTAGTTCCCTTAGATCCAGAGATAGAAAGAACATACAATAGACTTCGAAGGGAAAATCAAGAAAATATCCAAAT
GACCAATCCTAATCCTGAGGAGCCTAAGCCTATTAGGGACTACTTTCAGCCGGTCTTTCAGGAGCAACAATCAGGGATTCTCTATGCCCCGATCAATGCTAACAACTTTG
AGCTGAAAACGTTCAGAAAAAGTTTTGAACAACTGATGTGGAATTTTCCTACTGCAAGTGTACGGGTCAAGTTATAA
Protein sequenceShow/hide protein sequence
MLENGTEGDPLKVETEHNLSWPTLNFKERKRFKLEEAKREPSADQRRDAALGASRRCLSFSDLGGKSPIGGILALISTRDLLWELKARPRSGNQARRRGDRDGDTPKEVS
EVGSTSLGCLVSHVADDSFAPIQEHNSFDFAMVEHLGVSCMNSGEELESCSTYQEHVCEEEKENELAVTEEVQEVEFEVEKLSSVLSSSSFVDFDCPFFYSHESVIERQK
VGLCMRRVRELALVPLDPEIERTYNRLRRENQENIQMTNPNPEEPKPIRDYFQPVFQEQQSGILYAPINANNFELKTFRKSFEQLMWNFPTASVRVKL