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Spg032760 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032760
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold11:9471151..9472509
RNA-Seq ExpressionSpg032760
SyntenySpg032760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.5e-0952.63Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------SVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTV
        MGVLG   YIV LVNVGCTG ALHN D SC         S IQQ +Q+ ++E DV  LH +  +KL G  G GVT+
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------SVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTV

TYK02142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.7e-0752.78Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC----------SVIQQ----GQQVSLEEDDVCWLHAISLTKLA
        MGVL GP+YIV LVNVGCTG ALHNVD SC          S+++      +QV LEE D   LHA+   KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC----------SVIQQ----GQQVSLEEDDVCWLHAISLTKLA

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]2.6e-1039.45Show/hide
Query:  GVLGGPHYIVGLVNVGCTGRALHNVDRSCSV-----------------------------------IQQGQQVSLE--------EDDVCWLHAISLTKLA
        GV GGPHYIVGLVNVGCTGR LH++DRS  +                                   ++   ++  E        E+DVCWLHA+   K+A
Subjt:  GVLGGPHYIVGLVNVGCTGRALHNVDRSCSV-----------------------------------IQQGQQVSLE--------EDDVCWLHAISLTKLA

Query:  GGLGGGVTV
        GG GGGVTV
Subjt:  GGLGGGVTV

TrEMBL top hitse value%identityAlignment
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-0952.63Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------SVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTV
        MGVLG   YIV LVNVGCTG ALHN D SC         S IQQ +Q+ ++E DV  LH +  +KL G  G GVT+
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------SVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTV

A0A5D3BTL2 CACTA en-spm transposon protein1.3e-0752.78Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC----------SVIQQ----GQQVSLEEDDVCWLHAISLTKLA
        MGVL GP+YIV LVNVGCTG ALHNVD SC          S+++      +QV LEE D   LHA+   KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC----------SVIQQ----GQQVSLEEDDVCWLHAISLTKLA

A0A5D3CAC6 Uncharacterized protein1.3e-1039.45Show/hide
Query:  GVLGGPHYIVGLVNVGCTGRALHNVDRSCSV-----------------------------------IQQGQQVSLE--------EDDVCWLHAISLTKLA
        GV GGPHYIVGLVNVGCTGR LH++DRS  +                                   ++   ++  E        E+DVCWLHA+   K+A
Subjt:  GVLGGPHYIVGLVNVGCTGRALHNVDRSCSV-----------------------------------IQQGQQVSLE--------EDDVCWLHAISLTKLA

Query:  GGLGGGVTV
        GG GGGVTV
Subjt:  GGLGGGVTV

A0A5D3DBQ7 G-box-binding factor 1-like6.8e-0476.67Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC
        MG+LG PHYIV L+NVGC G ALHNVD SC
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCAGTGATTCAGCAGGGTCA
ACAGGTGTCGTTAGAGGAGGATGATGTTTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTGGTTTGGGAGGGGGTGTGACAGTAAGACACATGGAGAGGAGAA
TGTCCATAGTGGATTCTAGGTGTGCAATGGAGAATACATGCATCTTTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCAGTGATTCAGCAGGGTCA
ACAGGTGTCGTTAGAGGAGGATGATGTTTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTGGTTTGGGAGGGGGTGTGACAGTAAGACACATGGAGAGGAGAA
TGTCCATAGTGGATTCTAGGTGTGCAATGGAGAATACATGCATCTTTGCATGA
Protein sequenceShow/hide protein sequence
MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTVRHMERRMSIVDSRCAMENTCIFA