; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032779 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032779
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold11:6220664..6222789
RNA-Seq ExpressionSpg032779
SyntenySpg032779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.1e-1842.15Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR++   +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LI  GYLKE+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.5e-2043.8Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR+    +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LIR GYLKE+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]3.2e-1954.65Show/hide
Query:  DYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEA
        D  +KFEKYT T++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A
Subjt:  DYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEA

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]6.7e-1741.32Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR+    +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LIR GYL+E+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]5.7e-1650.63Show/hide
Query:  KFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTK
        +F +YT  ++P+EQ+LM+IRN +LL  P+ +K  P+ RD+S+YC +HRDH H+  +C  LK+EI++LI+ GYLKEF  K
Subjt:  KFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.0e-1842.15Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR++   +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LI  GYLKE+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

A0A6J1DRG9 uncharacterized protein LOC1110235871.4e-1557.75Show/hide
Query:  YTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKE
        YTLT+IP EQ+LMEI++  LL  P ++K+    R K +YCLFHRDH H+T++C  LK+E+E LIR GYLKE
Subjt:  YTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKE

A0A6J1DWY0 uncharacterized protein LOC1110252934.1e-2043.8Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR+    +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LIR GYLKE+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

A0A6J1DYL6 uncharacterized protein LOC1110257853.3e-1741.32Show/hide
Query:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK
        +KR+    +T+ KR+   +  +G     R +  + D  +KFEKYT T++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK
Subjt:  AKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLK

Query:  DEIEALIRNGYLKEFTTKAEA
        +E+E LIR GYL+E+  + +A
Subjt:  DEIEALIRNGYLKEFTTKAEA

A0A6J1DZ52 uncharacterized protein LOC1110256121.6e-1954.65Show/hide
Query:  DYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEA
        D  +KFEKYT T++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A
Subjt:  DYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAGAGCTGACGAGGACAACCAAGCAGAGATTAGACCAGGAAACCGACCCAGAGGAAAACCAGACCAAAGGGTCGGGCCAGTATGGTCGACCTCGGCCCAAGGC
CGAGGCCGAGCTCGATCGTCTCCGTTTGGTCCCTGCTGCCTCTGGCCGCCCCGATTTCGCCTGGTTTGTCCGAAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGA
GTAGGTATTTAAACCCCTCTTCGTCACTAAAAAAGGGATCTCGAACTCTATTCTCTACTCTCTCCTCTTGCTCTCTCGCTATCCTCCTTCCGTTTTCTAACTTAAGCATC
GGAGGCGAGGTCACTGAGACGAACAGGCCAGGGAGCCGAGGCCGAGGAGAAGAAGTTGATGCCAAAATCACCGCCCTTGAGGATAAGAGGGGCTTGATTAGAGACCCGAA
GAAGGGGAAGGAGCCAGTCGAGTACGTGGATGAGTCAGAGACGGGATCGAAGGGAAAAGAGACCGACAGTGCAACTAGCAAGGTCAGGGGGCTGAAGCATGTAGAACGCA
CAGTACTGAGGAGCCTAGAGCCAAGTACCAGCCGTAGAACAGACTTGAGAAATATGATCGAGGAGAAACGCAGAATGGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCC
GAAGCTGAAGCCAGGGCTGTCGAGGCTGAGGCCGAGGCCAAGAGGGACAATCTCCCTTGGAAGACTGAGACAAAAAGACAGTGGATAGACGAAGGAGGCCGAGGTCGAGC
AGACCATGGCCGAGGCCAACCAGACCGAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCTTACTTCAATCCCACAGGAGCAAATCTTGATGGAGATACGGAATACAA
ACCTGCTCAATGTGCCTAGAAAGCTAAAGTCAAATCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAG
CTAAAGGACGAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAAAGAGCTGACGAGGACAACCAAGCAGAGATTAGACCAGGAAACCGACCCAGAGGAAAACCAGACCAAAGGGTCGGGCCAGTATGGTCGACCTCGGCCCAAGGC
CGAGGCCGAGCTCGATCGTCTCCGTTTGGTCCCTGCTGCCTCTGGCCGCCCCGATTTCGCCTGGTTTGTCCGAAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGA
GTAGGTATTTAAACCCCTCTTCGTCACTAAAAAAGGGATCTCGAACTCTATTCTCTACTCTCTCCTCTTGCTCTCTCGCTATCCTCCTTCCGTTTTCTAACTTAAGCATC
GGAGGCGAGGTCACTGAGACGAACAGGCCAGGGAGCCGAGGCCGAGGAGAAGAAGTTGATGCCAAAATCACCGCCCTTGAGGATAAGAGGGGCTTGATTAGAGACCCGAA
GAAGGGGAAGGAGCCAGTCGAGTACGTGGATGAGTCAGAGACGGGATCGAAGGGAAAAGAGACCGACAGTGCAACTAGCAAGGTCAGGGGGCTGAAGCATGTAGAACGCA
CAGTACTGAGGAGCCTAGAGCCAAGTACCAGCCGTAGAACAGACTTGAGAAATATGATCGAGGAGAAACGCAGAATGGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCC
GAAGCTGAAGCCAGGGCTGTCGAGGCTGAGGCCGAGGCCAAGAGGGACAATCTCCCTTGGAAGACTGAGACAAAAAGACAGTGGATAGACGAAGGAGGCCGAGGTCGAGC
AGACCATGGCCGAGGCCAACCAGACCGAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCTTACTTCAATCCCACAGGAGCAAATCTTGATGGAGATACGGAATACAA
ACCTGCTCAATGTGCCTAGAAAGCTAAAGTCAAATCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAG
CTAAAGGACGAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAGACTAG
Protein sequenceShow/hide protein sequence
MHKELTRTTKQRLDQETDPEENQTKGSGQYGRPRPKAEAELDRLRLVPAASGRPDFAWFVRKRLRIPKNPRSMSRYLNPSSSLKKGSRTLFSTLSSCSLAILLPFSNLSI
GGEVTETNRPGSRGRGEEVDAKITALEDKRGLIRDPKKGKEPVEYVDESETGSKGKETDSATSKVRGLKHVERTVLRSLEPSTSRRTDLRNMIEEKRRMAKTAESEAKAA
EAEARAVEAEAEAKRDNLPWKTETKRQWIDEGGRGRADHGRGQPDRGDYLKKFEKYTLTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQ
LKDEIEALIRNGYLKEFTTKAEAD