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Spg032786 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032786
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:9391576..9397504
RNA-Seq ExpressionSpg032786
SyntenySpg032786
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-1441.83Show/hide
Query:  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ-------
        Q QP Q     +     LFGL Y EG KRPRGNR+SLQT +L K +     T  LS +        VEIELPVPDTLPTSAESS S+SS+  +       
Subjt:  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ-------

Query:  ----------------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV
                               G   ++  D+V WLHA+F  K AGGPG GV
Subjt:  ----------------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV

KAA0052217.1 hypothetical protein E6C27_scaffold207G00280 [Cucumis melo var. makuwa]4.6e-2048.05Show/hide
Query:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP
        EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SIDY+TEILS  LYGTVCTQ                 VEIEL 
Subjt:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP

Query:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL
        VPDTLPTSAESS S S S        ++  DDV WLH +FR K  GGPG GVT+
Subjt:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL

TYK01784.1 hypothetical protein E5676_scaffold113G00120 [Cucumis melo var. makuwa]4.6e-2048.05Show/hide
Query:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP
        EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SIDY+TEILS  LYGTVCTQ                 VEIEL 
Subjt:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP

Query:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL
        VPDTLPTSAESS S S S        ++  DDV WLH +FR K  GGPG GVT+
Subjt:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]5.8e-1534.88Show/hide
Query:  ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGNK-------------------RPRGNRSSLQTRKLAKI-IS
        E+  ERVKE EEE F G    ++G+   K    + W     + P    +F   LS  E  K                    PRGNRSSLQT +L KI IS
Subjt:  ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGNK-------------------RPRGNRSSLQTRKLAKI-IS

Query:  IDYMTEILSPMLYGTVCTQV---------------------------------------------------------EIELPVPDTLPTSAESSRSSSS-
        IDYMTEILS  LYGTVC QV                                                         EIEL VPDTLPTSAESS S+SS 
Subjt:  IDYMTEILSPMLYGTVCTQV---------------------------------------------------------EIELPVPDTLPTSAESSRSSSS-

Query:  ------------STFQEGQRV--------LLEEDDVRWLHAIFRTKLAGGPGEGVTLI
                    S  +   R+        ++ E+DV WLHA+FR K+AGG G GVT++
Subjt:  ------------STFQEGQRV--------LLEEDDVRWLHAIFRTKLAGGPGEGVTLI

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.1e-1741.18Show/hide
Query:  EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTFQ--------------
        E    PR NR SLQT +L K +SIDYMTEILS  L GTVCTQ                 VEIELPVPDTLPTSAE   S+SS+  +              
Subjt:  EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTFQ--------------

Query:  ------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY
                    EG   ++  DDV WLHA+FR K AGGP  GVT  V       +   +  W +  ++NY
Subjt:  ------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.1e-1441.83Show/hide
Query:  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ-------
        Q QP Q     +     LFGL Y EG KRPRGNR+SLQT +L K +     T  LS +        VEIELPVPDTLPTSAESS S+SS+  +       
Subjt:  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ-------

Query:  ----------------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV
                               G   ++  D+V WLHA+F  K AGGPG GV
Subjt:  ----------------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV

A0A5A7UCL6 Reverse transcriptase domain-containing protein2.2e-2048.05Show/hide
Query:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP
        EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SIDY+TEILS  LYGTVCTQ                 VEIEL 
Subjt:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP

Query:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL
        VPDTLPTSAESS S S S        ++  DDV WLH +FR K  GGPG GVT+
Subjt:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL

A0A5D3BRJ2 Reverse transcriptase domain-containing protein2.2e-2048.05Show/hide
Query:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP
        EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SIDY+TEILS  LYGTVCTQ                 VEIEL 
Subjt:  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELP

Query:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL
        VPDTLPTSAESS S S S        ++  DDV WLH +FR K  GGPG GVT+
Subjt:  VPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL

A0A5D3CAC6 Uncharacterized protein2.8e-1534.88Show/hide
Query:  ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGNK-------------------RPRGNRSSLQTRKLAKI-IS
        E+  ERVKE EEE F G    ++G+   K    + W     + P    +F   LS  E  K                    PRGNRSSLQT +L KI IS
Subjt:  ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGNK-------------------RPRGNRSSLQTRKLAKI-IS

Query:  IDYMTEILSPMLYGTVCTQV---------------------------------------------------------EIELPVPDTLPTSAESSRSSSS-
        IDYMTEILS  LYGTVC QV                                                         EIEL VPDTLPTSAESS S+SS 
Subjt:  IDYMTEILSPMLYGTVCTQV---------------------------------------------------------EIELPVPDTLPTSAESSRSSSS-

Query:  ------------STFQEGQRV--------LLEEDDVRWLHAIFRTKLAGGPGEGVTLI
                    S  +   R+        ++ E+DV WLHA+FR K+AGG G GVT++
Subjt:  ------------STFQEGQRV--------LLEEDDVRWLHAIFRTKLAGGPGEGVTLI

A0A5D3CCC7 DNA/RNA polymerases superfamily protein1.0e-1741.18Show/hide
Query:  EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTFQ--------------
        E    PR NR SLQT +L K +SIDYMTEILS  L GTVCTQ                 VEIELPVPDTLPTSAE   S+SS+  +              
Subjt:  EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTFQ--------------

Query:  ------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY
                    EG   ++  DDV WLHA+FR K AGGP  GVT  V       +   +  W +  ++NY
Subjt:  ------------EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCAATCCCAAGAGAATTCGAGGGAGAGAGTGAAGGAAGGAGAAGAAGAATGTTTCTACGGTTTTGAGGTTGGAGAAGATAGGAAAAAGCTCAAGCAAAGGCAGCC
ATGGCAGAAATCTGAGTTCAACCTGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGA
AACTAGCTAAGATCATTTCTATTGACTACATGACTGAGATATTGAGCCCGATGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTA
CCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACATTTCAGGAGGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGAC
TAAGCTAGCAGGTGGACCGGGAGAGGGTGTGACATTAATTGTCTTATTTTCAGGTACTTTGAGCTTAGGAGGTGGAAGACCCAAGTGGATTGAAGCAGGTCTGAAGAACT
ACACCAAAAATCAAAGGTTGAAGCCCCATAATGAGAAAGAACGAGACAAGACCGAGAAAAAAGACAGCAAGGCTGGAAGAGGGGTCGGCGTTGAGATGAGGACCCTAGCG
TCTCGACGCCGACGCGATTCCGAAGCAGATTGTAAAGTTCGTGGCGTCTCGACACTGTTCCTAACGTCTCGACGCTGCGACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTCAATCCCAAGAGAATTCGAGGGAGAGAGTGAAGGAAGGAGAAGAAGAATGTTTCTACGGTTTTGAGGTTGGAGAAGATAGGAAAAAGCTCAAGCAAAGGCAGCC
ATGGCAGAAATCTGAGTTCAACCTGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGA
AACTAGCTAAGATCATTTCTATTGACTACATGACTGAGATATTGAGCCCGATGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTA
CCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACATTTCAGGAGGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGAC
TAAGCTAGCAGGTGGACCGGGAGAGGGTGTGACATTAATTGTCTTATTTTCAGGTACTTTGAGCTTAGGAGGTGGAAGACCCAAGTGGATTGAAGCAGGTCTGAAGAACT
ACACCAAAAATCAAAGGTTGAAGCCCCATAATGAGAAAGAACGAGACAAGACCGAGAAAAAAGACAGCAAGGCTGGAAGAGGGGTCGGCGTTGAGATGAGGACCCTAGCG
TCTCGACGCCGACGCGATTCCGAAGCAGATTGTAAAGTTCGTGGCGTCTCGACACTGTTCCTAACGTCTCGACGCTGCGACGTTTAG
Protein sequenceShow/hide protein sequence
MCQSQENSRERVKEGEEECFYGFEVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTL
PTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNYTKNQRLKPHNEKERDKTEKKDSKAGRGVGVEMRTLA
SRRRRDSEADCKVRGVSTLFLTSRRCDV