; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032793 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032793
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L9, chloroplastic
Genome locationscaffold11:5806803..5810687
RNA-Seq ExpressionSpg032793
SyntenySpg032793
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000244 - Ribosomal protein L9
IPR020069 - Ribosomal protein L9, C-terminal
IPR036791 - Ribosomal protein L9, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001235742.1 50S ribosomal protein L9, chloroplastic-like [Glycine max]8.5e-4569.28Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + +    ++G    V A  F +  +     +  T    +EM+IEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

NP_001237307.2 50S ribosomal protein L9, chloroplastic [Glycine max]2.5e-4468.63Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + + +  ++G    V A  F +  +     +  T    +EM+IEEERIEAEK+RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

XP_004147275.1 50S ribosomal protein L9, chloroplastic [Cucumis sativus]2.5e-4494.23Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EMRIEEERIEAEKKRV EEAQQLALIF+TVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEY+AELKLHPE++ARVRVN
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VFAN
        VFAN
Subjt:  VFAN

XP_022152873.1 50S ribosomal protein L9, chloroplastic [Momordica charantia]5.5e-4493.27Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EMR+EEERIEAEKKRVKEEAQQLA+IFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRD+DKRIV LPEIRETGEYIAELKLHPE+SARVRVN
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VFAN
        V+AN
Subjt:  VFAN

XP_028192108.1 50S ribosomal protein L9, chloroplastic-like [Glycine soja]2.5e-4469.28Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + +    ++G    V A  F +  +     +  T    +EM+IEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

TrEMBL top hitse value%identityAlignment
A0A445HMF7 50S ribosomal protein L9, chloroplastic1.2e-4468.63Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + + +  ++G    V A  F +  +     +  T    +EM+IEEERIEAEK+RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

A0A445I2R9 50S ribosomal protein L9, chloroplastic1.2e-4469.28Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + +    ++G    V A  F +  +     +  T    +EM+IEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

C6T186 50S ribosomal protein L9, chloroplastic4.1e-4569.28Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + +    ++G    V A  F +  +     +  T    +EM+IEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

I1LKZ0 50S ribosomal protein L9, chloroplastic1.2e-4469.28Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + +    ++G    V A  F +  +     +  T    +EM+IEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

I1LR95 50S ribosomal protein L9, chloroplastic1.2e-4468.63Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR++ L + + +  ++G    V A  F +  +     +  T    +EM+IEEERIEAEK+RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIKAQLQR++DKRIVDLPEIRETGEYIAELKLHPE++ARVRVNVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

SwissProt top hitse value%identityAlignment
P11894 50S ribosomal protein L9, chloroplastic4.8e-4385.58Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EM+IEEERIEAEK+RV EEAQQLAL FET GAFKVKRKGGKGKQIFG+VTAQDLVDIIKAQLQR++DKRIV+LPEIRETGEYIAELKLHP+++A+VRVN
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VFAN
        V AN
Subjt:  VFAN

P25864 50S ribosomal protein L9, chloroplastic1.8e-4261.44Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR+V L + + +  ++G    V A  F +  +     +  T    +E+++E+ERIEAEK+RVKEEAQQLA++F+TVGAFKVKRKGGKGK IFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIK+QLQ+DIDKR+V LPEIRETGEYIAELKLHP+++ARV++NVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN

P82180 50S ribosomal protein L9, chloroplastic1.4e-4283.65Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EM++E+ERIEAEKKRVKEEAQQLA +FETVGAFKVKRKGGKGKQIFG+VTAQDLVDIIKAQLQRD+DK++V LP+IRETGEYIAELKLHP+++A+VRV 
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VFAN
        VFAN
Subjt:  VFAN

Q6JJ61 50S ribosomal protein L9, chloroplastic2.4e-4286.54Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EM+IEEERIEAEKKRVKEEAQQLALIFETVG FKVKRKGGKGKQIFG+VTAQDLVDIIKAQLQR++DKRIV LPEIRETG Y AELKLHPE++ARV+V 
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VFAN
        V AN
Subjt:  VFAN

Q8L803 50S ribosomal protein L9, chloroplastic3.2e-3975.49Show/hide
Query:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN
        +EM++E+ERIEAEKKRVKEEAQQLA +FET+GAFKV RKGGKGKQIFG+VTAQDLVDIIK+QL RD+DKR+V++PEIRE GEY+AE+KLHP+++A+VR+ 
Subjt:  REMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVN

Query:  VF
        V+
Subjt:  VF

Arabidopsis top hitse value%identityAlignment
AT3G44890.1 ribosomal protein L91.3e-4361.44Show/hide
Query:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT
        +A  LR+V L + + +  ++G    V A  F +  +     +  T    +E+++E+ERIEAEK+RVKEEAQQLA++F+TVGAFKVKRKGGKGK IFG+VT
Subjt:  RAHTLRRVRLTQ-ILEAAREGHAQGVSASDFEDQQI----GEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVT

Query:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN
        AQDLVDIIK+QLQ+DIDKR+V LPEIRETGEYIAELKLHP+++ARV++NVFAN
Subjt:  AQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAAAGCAACACACGACTGGAAGGAGGAGACCAAACCGAGGCGACCCACAAAAAAAGGAGCAAAAAAAACGGCGGCGCACGCGCTCACACGCTCCGGCGCGTGAG
ACTGACGCAGATTCTGGAGGCGGCGCGTGAGGGCCACGCGCAGGGAGTTTCGGCTTCGGATTTTGAGGACCAACAGATCGGCGAGTGGGCTACGTTTTGGACTGGGCGGG
AAATGCGGATTGAAGAGGAAAGAATTGAGGCTGAGAAAAAACGGGTAAAAGAGGAGGCACAGCAACTCGCTCTGATTTTTGAAACTGTTGGAGCTTTCAAGGTGAAGCGG
AAAGGTGGAAAAGGAAAACAGATATTTGGAACTGTTACAGCACAGGATCTTGTTGATATTATCAAGGCACAACTTCAGAGGGATATAGACAAGCGGATTGTCGATCTTCC
AGAGATCAGGGAAACGGGAGAATATATTGCAGAGCTGAAGCTTCACCCTGAAATTTCTGCTCGAGTGAGAGTGAATGTTTTTGCTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAAAGCAACACACGACTGGAAGGAGGAGACCAAACCGAGGCGACCCACAAAAAAAGGAGCAAAAAAAACGGCGGCGCACGCGCTCACACGCTCCGGCGCGTGAG
ACTGACGCAGATTCTGGAGGCGGCGCGTGAGGGCCACGCGCAGGGAGTTTCGGCTTCGGATTTTGAGGACCAACAGATCGGCGAGTGGGCTACGTTTTGGACTGGGCGGG
AAATGCGGATTGAAGAGGAAAGAATTGAGGCTGAGAAAAAACGGGTAAAAGAGGAGGCACAGCAACTCGCTCTGATTTTTGAAACTGTTGGAGCTTTCAAGGTGAAGCGG
AAAGGTGGAAAAGGAAAACAGATATTTGGAACTGTTACAGCACAGGATCTTGTTGATATTATCAAGGCACAACTTCAGAGGGATATAGACAAGCGGATTGTCGATCTTCC
AGAGATCAGGGAAACGGGAGAATATATTGCAGAGCTGAAGCTTCACCCTGAAATTTCTGCTCGAGTGAGAGTGAATGTTTTTGCTAACTGA
Protein sequenceShow/hide protein sequence
MAQSNTRLEGGDQTEATHKKRSKKNGGARAHTLRRVRLTQILEAAREGHAQGVSASDFEDQQIGEWATFWTGREMRIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKR
KGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYIAELKLHPEISARVRVNVFAN