; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032843 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032843
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:14815285..14819881
RNA-Seq ExpressionSpg032843
SyntenySpg032843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.8e-2136.99Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     +   L  +   V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-2733.1Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     + + L  +   V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARL---------QRKQERRDALGEFSKS-----
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+         Q+    R A    +++     
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARL---------QRKQERRDALGEFSKS-----

Query:  --------AVSRQRRDAVYSVSTL-------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
                 +S+Q     + +S L             S ERD AL+KALQ NF++P P FP FP ++L         E E E D  G  +
Subjt:  --------AVSRQRRDAVYSVSTL-------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-2139.31Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V  S  AIN++Y L D P   ++E   A +  +L  +   V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVL
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK
        L +++L   SI+VG+II  EI     +K G LFFP+ IT +C  A  P    +  L + G ID   +AR+ ++
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.2e-2632.97Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     +  +L  +   V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQR----KQERRDALGEFSKSAVSRQRRDAV
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ +    +  ++ +    + ++ SR   D +
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQR----KQERRDALGEFSKSAVSRQRRDAV

Query:  YSVSTL--------------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
          +  L                    S ERD AL+KALQ NF++P P FP FP ++L         E E E D  G  +
Subjt:  YSVSTL--------------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.6e-2231.45Show/hide
Query:  RGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRL-SKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLA
        RGV V     AIN L  L       +  ++ + S  +L  + RE+G  G +W   S    RT++ + LK  AN W+ FI+  L PTTHDS++S E+++L 
Subjt:  RGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRL-SKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLA

Query:  FAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILL---DKGVIDTPNLARLQRKQER-------RDALGEFSKSAVS---
        + ++   +I+VGK++   I  C +++ GKLFFP+ I  L  +AGVPE  +D+++    +K  ID   +++L+ + ER         A+ E  + + S   
Subjt:  FAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILL---DKGVIDTPNLARLQRKQER-------RDALGEFSKSAVS---

Query:  ---RQRRDAVYSVSTLSAERDAALRKALQANFSKPYPVFPLFPDDLLN
            QR + V  + T+ A+    L   L+A+  K    F    +DL N
Subjt:  ---RQRRDAVYSVSTLSAERDAALRKALQANFSKPYPVFPLFPDDLLN

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-2136.99Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     +   L  +   V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-2733.1Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     + + L  +   V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARL---------QRKQERRDALGEFSKS-----
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+         Q+    R A    +++     
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARL---------QRKQERRDALGEFSKS-----

Query:  --------AVSRQRRDAVYSVSTL-------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
                 +S+Q     + +S L             S ERD AL+KALQ NF++P P FP FP ++L         E E E D  G  +
Subjt:  --------AVSRQRRDAVYSVSTL-------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

A0A2P5BNT0 Uncharacterized protein (Fragment)2.6e-2037.14Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDF--PHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQER
        ++ RGV V  S  AIN++Y L D    H+ + E    P   +L  +   V I GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+ER
Subjt:  LFFRGVAVDWSPGAINSLYNLQDF--PHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQER

Query:  VLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK
        VLL +++L   SI++G++I  EI  C  +K G LFFP+ I  +C+ A  P    +  L + G ID   +AR+ ++
Subjt:  VLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK

A0A2P5CPE8 Uncharacterized protein8.0e-2239.31Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V  S  AIN++Y L D P   ++E   A +  +L  +   V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVL
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK
        L +++L   SI+VG+II  EI     +K G LFFP+ IT +C  A  P    +  L + G ID   +AR+ ++
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRK

A0A2P5DXM3 Uncharacterized protein1.1e-2632.97Show/hide
Query:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL
        ++ RGV V WS  AIN+++ L D P   ++E     +  +L  +   V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+L
Subjt:  LFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTHDSTVSQERVL

Query:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQR----KQERRDALGEFSKSAVSRQRRDAV
        L  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ +    +  ++ +    + ++ SR   D +
Subjt:  LAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQR----KQERRDALGEFSKSAVSRQRRDAV

Query:  YSVSTL--------------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
          +  L                    S ERD AL+KALQ NF++P P FP FP ++L         E E E D  G  +
Subjt:  YSVSTL--------------------SAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAAACGAGAGGAAAGAAAGAGAGAGAAGTGGAGGAGAATGTGCCTACTACGCCAAAAGTTTCTAAGAAGAAGACGAAGAAGAAGAGAACGCCTGTAGAAAGGGA
AGTCAAACGGCTTAAAGGACTTCAACAAGCTGAAGTTTTCGAAGTATTAGAGAAGGTACTAGAGGACATTGTTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTG
AAAAAGAAAAAGATTCTGAGAGGATTGACGGAACGGACCAAGAAAGTCAAGAAAAGGCCGCAACAGGTTTGCAAGGGCCAGGCACTAATAAAACAGTAGAGCAAGAGATT
CTGGAAGAGATAGTGAAGGATCTGCCACGCCACCGTCGTAAGCAGAAAGTAGGGCGAGTAAAGAGGATCCGGACCAACACTCCATCTCCTCCTTCGACTGACTCAGAGAA
AGAAGAATCTAGAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACCGAGATGAAAAATGGTAAGGATAAAGGCAAAGGTATTTCAGGAGGCGAGGTTGAAA
CAGAAGTGGCTCGCCCAGAAGAAAGGGGGTTGCCTTATGAGCGCTTTGTCAATCATTTTGCTAGGGCAAAATATATTGACATGTTGAAGAGAGATTTCCTATTCGAGAGA
GGGTTCAGTGGTGATCTTCCGCATTTTCTGAGGGCTGGCATCACAAACCATGGCTGGGAGTTATTCTTTCGTGGAGTAGCTGTCGACTGGAGTCCTGGTGCCATCAATTC
ACTGTACAACCTTCAAGATTTCCCGCATGCTGGTTATAATGAGATTGCAGTAGCACCATCTAATGAGCAGTTGAATGCTTTAGCTCGGGAAGTTGGAATAGAAGGTGCAC
AGTGGCGACTGTCAAAAACCGAGAAAAGGACTTTTCAGGTTGCGTATTTGAAGAAGGAAGCCAATACTTGGATGGGATTTATCAAACAAAGGCTGCTTCCAACAACACAT
GACTCCACAGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGCAATACTACGGTCCCTTAGCATCGATGTGGGTAAAATTATCGCTGGTGAGATTTTTGGATGTTGGAGAAA
GAAGGTGGGAAAACTATTCTTTCCAAACACAATTACAATGCTTTGTAAGAGAGCAGGGGTTCCAGAGAGTGCAGAGGACGTGATCCTACTAGATAAGGGAGTAATCGACA
CACCTAACTTGGCACGGCTTCAGAGAAAGCAAGAGCGTCGCGACGCTCTCGGCGAATTTTCCAAATCCGCAGTATCGCGACAGCGTCGCGATGCTGTCTATAGCGTCTCG
ACGCTGTCGGCAGAACGTGATGCTGCATTGAGGAAGGCACTTCAAGCTAATTTTTCCAAGCCCTATCCAGTCTTCCCCCTATTCCCTGATGATTTGCTGAACCCTTGGAT
CCCACCACCACCCGTTGAGAGGGAAGAGGAAGATGATGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAAACGAGAGGAAAGAAAGAGAGAGAAGTGGAGGAGAATGTGCCTACTACGCCAAAAGTTTCTAAGAAGAAGACGAAGAAGAAGAGAACGCCTGTAGAAAGGGA
AGTCAAACGGCTTAAAGGACTTCAACAAGCTGAAGTTTTCGAAGTATTAGAGAAGGTACTAGAGGACATTGTTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTG
AAAAAGAAAAAGATTCTGAGAGGATTGACGGAACGGACCAAGAAAGTCAAGAAAAGGCCGCAACAGGTTTGCAAGGGCCAGGCACTAATAAAACAGTAGAGCAAGAGATT
CTGGAAGAGATAGTGAAGGATCTGCCACGCCACCGTCGTAAGCAGAAAGTAGGGCGAGTAAAGAGGATCCGGACCAACACTCCATCTCCTCCTTCGACTGACTCAGAGAA
AGAAGAATCTAGAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACCGAGATGAAAAATGGTAAGGATAAAGGCAAAGGTATTTCAGGAGGCGAGGTTGAAA
CAGAAGTGGCTCGCCCAGAAGAAAGGGGGTTGCCTTATGAGCGCTTTGTCAATCATTTTGCTAGGGCAAAATATATTGACATGTTGAAGAGAGATTTCCTATTCGAGAGA
GGGTTCAGTGGTGATCTTCCGCATTTTCTGAGGGCTGGCATCACAAACCATGGCTGGGAGTTATTCTTTCGTGGAGTAGCTGTCGACTGGAGTCCTGGTGCCATCAATTC
ACTGTACAACCTTCAAGATTTCCCGCATGCTGGTTATAATGAGATTGCAGTAGCACCATCTAATGAGCAGTTGAATGCTTTAGCTCGGGAAGTTGGAATAGAAGGTGCAC
AGTGGCGACTGTCAAAAACCGAGAAAAGGACTTTTCAGGTTGCGTATTTGAAGAAGGAAGCCAATACTTGGATGGGATTTATCAAACAAAGGCTGCTTCCAACAACACAT
GACTCCACAGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGCAATACTACGGTCCCTTAGCATCGATGTGGGTAAAATTATCGCTGGTGAGATTTTTGGATGTTGGAGAAA
GAAGGTGGGAAAACTATTCTTTCCAAACACAATTACAATGCTTTGTAAGAGAGCAGGGGTTCCAGAGAGTGCAGAGGACGTGATCCTACTAGATAAGGGAGTAATCGACA
CACCTAACTTGGCACGGCTTCAGAGAAAGCAAGAGCGTCGCGACGCTCTCGGCGAATTTTCCAAATCCGCAGTATCGCGACAGCGTCGCGATGCTGTCTATAGCGTCTCG
ACGCTGTCGGCAGAACGTGATGCTGCATTGAGGAAGGCACTTCAAGCTAATTTTTCCAAGCCCTATCCAGTCTTCCCCCTATTCCCTGATGATTTGCTGAACCCTTGGAT
CCCACCACCACCCGTTGAGAGGGAAGAGGAAGATGATGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MPKTRGKKEREVEENVPTTPKVSKKKTKKKRTPVEREVKRLKGLQQAEVFEVLEKVLEDIVEEVIAEEEPKDSEKEKDSERIDGTDQESQEKAATGLQGPGTNKTVEQEI
LEEIVKDLPRHRRKQKVGRVKRIRTNTPSPPSTDSEKEESRNQEEIGKKIAEDETEMKNGKDKGKGISGGEVETEVARPEERGLPYERFVNHFARAKYIDMLKRDFLFER
GFSGDLPHFLRAGITNHGWELFFRGVAVDWSPGAINSLYNLQDFPHAGYNEIAVAPSNEQLNALAREVGIEGAQWRLSKTEKRTFQVAYLKKEANTWMGFIKQRLLPTTH
DSTVSQERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTITMLCKRAGVPESAEDVILLDKGVIDTPNLARLQRKQERRDALGEFSKSAVSRQRRDAVYSVS
TLSAERDAALRKALQANFSKPYPVFPLFPDDLLNPWIPPPPVEREEEDDDAGQED