; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032848 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032848
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold11:14649622..14656526
RNA-Seq ExpressionSpg032848
SyntenySpg032848
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PWA73584.1 hypothetical protein CTI12_AA146360 [Artemisia annua]4.8e-3126.97Show/hide
Query:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW----NMGRKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLD
        SDH PIL ++   V       ++    +FE  WL+ E+   +V++ W      G +N+   I   VE+  ++L +WNK    G +Q  ++ K   +Q L 
Subjt:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW----NMGRKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLD

Query:  QRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP-----
           D     +  +   E+ +LL  EE  WK RSR  WL  GDKNT++FHS+AS R+++N I  +KD+ G WVE+++++  +   YF  LF S++P     
Subjt:  QRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP-----

Query:  ------------DQRKLEEATSSIKVRKALIN-SPFLA-----------NKNENAATLLCEH--HQSATQNISVSTDIDQY-------------------
                    D+  LE   +S +V +AL+   P  A            K      ++ +   H  +  NI    +++ +                   
Subjt:  ------------DQRKLEEATSSIKVRKALIN-SPFLA-----------NKNENAATLLCEH--HQSATQNISVSTDIDQY-------------------

Query:  --YKSVLHVSNRESVNHCIWDCKIAKQVWIR-YFPNLQDS-GDSFREKWTP--MDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFR
          Y   L  S  E V H ++ C  AK VW R  F  L D+ G S    +    +D   +  +FF        + I+WG+W  RN  K+   +        
Subjt:  --YKSVLHVSNRESVNHCIWDCKIAKQVWIR-YFPNLQDS-GDSFREKWTP--MDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFR

Query:  SIEANLDGIQYLSDDSKVPPR----FKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLL
         + A    + Y + + KV  R     +  S   W  P  +  K N DAAW +E G  GLG++AR+ NG  + +G K      S +  E KAI     + +
Subjt:  SIEANLDGIQYLSDDSKVPPR----FKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLL

Query:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
                 ++ ESDS + I  L + S V  E  ++  D+   +       + F RR+ N+ AH +A   L
Subjt:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.2e-2835.29Show/hide
Query:  QNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNAFDINNKVEDI----LSKLYQWNKERLQGSIQGA
        QN+    L    SDH PI+ ++K    +   K+    +  +E+ W  +EAC NIV+  W     N+      K + +    L+ L  W+KE  +G     
Subjt:  QNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNAFDINNKVEDI----LSKLYQWNKERLQGSIQGA

Query:  IERKNNEIQWLDQRQDDVRE-------EDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRV
          RK  + + +D+ +   +E       E+I K E ++S +L +EE+YWK RSR DWL  GDKNTK+FHSKAS R+RKN I G++DD GNWV+D E I   
Subjt:  IERKNNEIQWLDQRQDDVRE-------EDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRV

Query:  AVEYFNKLFISTNPDQRKLEEATSSI--KVRKAL---INSPFLANKNENAATLLC
           +F +LF S+NP Q ++ EA   +  KV + +   +  PF       A + +C
Subjt:  AVEYFNKLFISTNPDQRKLEEATSSI--KVRKAL---INSPFLANKNENAATLLC

XP_015382878.1 uncharacterized protein LOC107175701 [Citrus sinensis]1.0e-2831.97Show/hide
Query:  HLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHK--FEESWLQFEACKNIVKEVWNMG---RKNNAFDI-NNKVEDILSKLYQWNKERLQGSIQGAIERK
        HL +  SDH PIL ++      KG +  R + H+  +E+ W  +E C+ IVK  W  G    KNN  ++   K ++ L+ L  W+K+   G  +   + K
Subjt:  HLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHK--FEESWLQFEACKNIVKEVWNMG---RKNNAFDI-NNKVEDILSKLYQWNKERLQGSIQGAIERK

Query:  NNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFIS
        N   +  +Q       E++ + E ++  +L +EE++WK RSR DWL  GD+N K+FH+KAS +K+KN I G++D++G W+E++ ++ ++  +YF  +F +
Subjt:  NNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFIS

Query:  TNPDQRKLEEATSSIKVR-----KALINSPFLANKNENAATLLC
        TNP Q +L  A  ++  +     +  ++ PF   + E A   +C
Subjt:  TNPDQRKLEEATSSIKVR-----KALINSPFLANKNENAATLLC

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]3.5e-2933.73Show/hide
Query:  NIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNAFD----INNKVEDILSKLYQWNKERLQGSIQ--G
        N+ + +L+   SDH P++ +++        K+    +  +E+ W  +E CKNIVKE W  G   +  D          + L++L  W++    G  +   
Subjt:  NIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNAFD----INNKVEDILSKLYQWNKERLQGSIQ--G

Query:  AIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFN
         +++K +E++    ++++V E  I   E ++ K+L +EE+YWK RSR DWL  GDKNTK+FHSKAS RKRKN I G+ D H  WV+D E + +   EYF 
Subjt:  AIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFN

Query:  KLFISTNPDQRKLEEATSSIKVRKAL-----INSPFLANKNENAATLLC
         LF +++P ++++E A + +K R  L     ++SPF   +   A + +C
Subjt:  KLFISTNPDQRKLEEATSSIKVRKAL-----INSPFLANKNENAATLLC

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.0e-1326.67Show/hide
Query:  ESVNHCIWDCKIAKQVWIRYFPNLQDSGDSFREKWTPMDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLDGIQYLSDDS
        E+V+H + +C  A+++W RY    ++    +R     M ++  +     + +  +  +++W IW  RN       K  P  +  + EA ++  + +    
Subjt:  ESVNHCIWDCKIAKQVWIRYFPNLQDSGDSFREKWTPMDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLDGIQYLSDDS

Query:  KVPPRFKNHSSQ-SWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLR---SLLVNFGNPLPRILVESDS
         V     N   Q  WSPPP  + K+N DAA   E  + GLG + RDS+G+   A  K ++   S+   E  A+E GL+      + FG      + ESDS
Subjt:  KVPPRFKNHSSQ-SWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLR---SLLVNFGNPLPRILVESDS

Query:  ANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
           I ++N  S   +E   +  D++   +       + S RD N  AH LA+  L
Subjt:  ANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]5.9e-2937.61Show/hide
Query:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW-NMGRKNNAFDINNKVEDILSK----LYQWN
        +AN +  G+ Q   + HL  H SDHRP++ Q K       N++R+    KFEESWL +E C+  + E W N G  N      N+ +D ++K    L  W 
Subjt:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW-NMGRKNNAFDINNKVEDILSK----LYQWN

Query:  KERLQGSIQGAIERKNNEIQWLDQRQDDVREED---IIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVED
          + Q   +  I++   +I+  D   +D  +E+   +++A  +L  LL ++E+YW  +S+  WL  GDKNTK+FHSKASQR+R+N I+G+KD H NWVE+
Subjt:  KERLQGSIQGAIERKNNEIQWLDQRQDDVREED---IIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVED

Query:  EEEIGRVAVEYFNKLFISTNPDQRKLEEATSSIK
         E+I  VA EYF  +F S   D  ++EE   +++
Subjt:  EEEIGRVAVEYFNKLFISTNPDQRKLEEATSSIK

TrEMBL top hitse value%identityAlignment
A0A2N9F2M3 Uncharacterized protein3.0e-2635.21Show/hide
Query:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNA-FDINNKVEDILSKLYQWNKERL
        +AN        N  I H+ +  SDH  +LA     V    N +RR    +FE SWL+ E C+ +VKE W M +   A + +  K++     L QW++ ++
Subjt:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNA-FDINNKVEDILSKLYQWNKERL

Query:  QGSIQGAIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRV
        + + +   + KN  +    Q  D+   +++     EL++LL++EE++W+ RSR  WLH GD+NTK+FH+ ASQRK+ N I G++D +  W  D+  IG  
Subjt:  QGSIQGAIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRV

Query:  AVEYFNKLFISTN
        AV+YF+ LF S++
Subjt:  AVEYFNKLFISTN

A0A2U1KHJ0 CCHC-type domain-containing protein1.6e-2722.22Show/hide
Query:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMG-RKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLDQRQ
        SDH PI+    C +S    K+ R+   +FE  WL+ ++   +V++ W  G       D    V +  ++L  WNK R  G +Q +I+ K   +Q L  R 
Subjt:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMG-RKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLDQRQ

Query:  DDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP--------
        D     +      ++ +LL  EE+ WK RSR +WL  GDKNT++FH++AS R+R+N+I  +K   G WVE+  E+ ++   YF+ LF S++P        
Subjt:  DDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP--------

Query:  ---------DQRKLEEATSSIKVRKAL-----------------------INSPFLANKN----------------ENAATLLCEHHQSATQNISVSTDI
                 +++ LE   +S +VR  L                       I   F++                   ++A  L  E  +   +  ++S  +
Subjt:  ---------DQRKLEEATSSIKVRKAL-----------------------INSPFLANKN----------------ENAATLLCEHHQSATQNISVSTDI

Query:  ------------------------DQYYKSVLHVSNR---------------ESVNHCIWDCKIAKQVWIR-----YFP-----NLQDSGDSFREKWTPM
                                + Y  ++ ++ +R               E++ H ++ C +AK VW R     ++        QD      EK+  +
Subjt:  ------------------------DQYYKSVLHVSNR---------------ESVNHCIWDCKIAKQVWIR-----YFP-----NLQDSGDSFREKWTPM

Query:  DKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLDGIQYLSDDSKVPPRFKNHSSQS--WSPPPQNFWKLNTDAAWSEEKGI
         +W +F            + I+WG+W  RN   +  +     ++    ++ L      +    +      H+  +  W  P     K+N DAAW +E G 
Subjt:  DKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLDGIQYLSDDSKVPPRFKNHSSQS--WSPPPQNFWKLNTDAAWSEEKGI

Query:  GGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRV------
         GLG++AR+  G  +F+G +      S L  E KA+   +  ++         ++ E++S   +  L +         T+     + +E++ ++      
Subjt:  GGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRV------

Query:  SYRFSRRDSNIEAHLLARQGL
        ++ F +R+ N  AH +A   L
Subjt:  SYRFSRRDSNIEAHLLARQGL

A0A2U1NJ84 RNase H domain-containing protein2.3e-3126.97Show/hide
Query:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW----NMGRKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLD
        SDH PIL ++   V       ++    +FE  WL+ E+   +V++ W      G +N+   I   VE+  ++L +WNK    G +Q  ++ K   +Q L 
Subjt:  SDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW----NMGRKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERKNNEIQWLD

Query:  QRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP-----
           D     +  +   E+ +LL  EE  WK RSR  WL  GDKNT++FHS+AS R+++N I  +KD+ G WVE+++++  +   YF  LF S++P     
Subjt:  QRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNP-----

Query:  ------------DQRKLEEATSSIKVRKALIN-SPFLA-----------NKNENAATLLCEH--HQSATQNISVSTDIDQY-------------------
                    D+  LE   +S +V +AL+   P  A            K      ++ +   H  +  NI    +++ +                   
Subjt:  ------------DQRKLEEATSSIKVRKALIN-SPFLA-----------NKNENAATLLCEH--HQSATQNISVSTDIDQY-------------------

Query:  --YKSVLHVSNRESVNHCIWDCKIAKQVWIR-YFPNLQDS-GDSFREKWTP--MDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFR
          Y   L  S  E V H ++ C  AK VW R  F  L D+ G S    +    +D   +  +FF        + I+WG+W  RN  K+   +        
Subjt:  --YKSVLHVSNRESVNHCIWDCKIAKQVWIR-YFPNLQDS-GDSFREKWTP--MDKWTSFSNFFNEEDRRKAISIIWGIWNHRNLVKNNSIKAYPNSIFR

Query:  SIEANLDGIQYLSDDSKVPPR----FKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLL
         + A    + Y + + KV  R     +  S   W  P  +  K N DAAW +E G  GLG++AR+ NG  + +G K      S +  E KAI     + +
Subjt:  SIEANLDGIQYLSDDSKVPPR----FKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLL

Query:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
                 ++ ESDS + I  L + S V  E  ++  D+   +       + F RR+ N+ AH +A   L
Subjt:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL

A0A7N2LVK2 Uncharacterized protein2.7e-2738.58Show/hide
Query:  IQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNA--FDINNKVEDILSKLYQWNKERLQGSIQGAIERKNN
        + HL  H SDH PI+ Q +    +  N+  R    KFEESWL +E C+ ++KEVW    ++++    I  K++    +L  W   R     +  I++   
Subjt:  IQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNA--FDINNKVEDILSKLYQWNKERLQGSIQGAIERKNN

Query:  EIQWLDQRQDDVREE-DIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLF
         ++ L   +  V    + ++   +L  LL ++E+YW  RSR  WL  GDKNTK+FHSKASQR+R+N I GI+D+  NWVE +E+I RVA+ YF  LF
Subjt:  EIQWLDQRQDDVREE-DIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLF

A0A803PV25 Uncharacterized protein1.3e-2631.98Show/hide
Query:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEV-SRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW---NMGRKNNAFDINNKVEDILSKLYQWNK
        +   + + K +  +I  L++ +SDHR ++  I   +   K  K +R S+  FEE+W Q E C  IV  +W   N+  +  +F    K+      L  WN+
Subjt:  MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEV-SRKGNKQRRLSKHKFEESWLQFEACKNIVKEVW---NMGRKNNAFDINNKVEDILSKLYQWNK

Query:  ERLQGSIQGAIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEI
        ++ +  +   +E+    +  L   Q     E I + E +L+ LLE++E YW+ RSR  WL WGD+NTK+FH KAS R++KN I+G++D  G W +D+  +
Subjt:  ERLQGSIQGAIERKNNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEI

Query:  GRVAVEYFNKLFISTNPDQRKLEEATSSIKVR-KALINSPFLANKNE
         R+  +Y+ KLF S++ ++  L E  S ++ +  +++N+  LA   E
Subjt:  GRVAVEYFNKLFISTNPDQRKLEEATSSIKVR-KALINSPFLANKNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-0525.17Show/hide
Query:  WSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSES
        W  P + + K N D ++         GW+ RDSNGS++ AG    +K  + L  E++A+   + S+   + +   R+  E D+     ++N  S VY   
Subjt:  WSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSES

Query:  RTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGLVHESV
             D+         + + + RR  N  A +LA+  L ++S+
Subjt:  RTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGLVHESV

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-1525.09Show/hide
Query:  NRESVNHCIWDCKIAKQVW-IRYFPNLQDSGDSFREKWTPMDKWTS--FSNFF---NEEDRRKAIS--------IIWGIWNHRN--LVKNNSIKAYPNSI
        +RE+VNH ++ C  A+ VW I   P              P  +WT   ++N +   N E     +         ++W +W  RN  + K     A P  +
Subjt:  NRESVNHCIWDCKIAKQVW-IRYFPNLQDSGDSFREKWTPMDKWTS--FSNFF---NEEDRRKAIS--------IIWGIWNHRN--LVKNNSIKAYPNSI

Query:  FRSIEANLDGIQYLSDDSKVP-PRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSL-L
         R++E   +       + K   P+ + + S  W  PP  + K NTDA W  E    G+GWI R+ +G  ++ G + + +  ++L  EL+A+   + ++  
Subjt:  FRSIEANLDGIQYLSDDSKVP-PRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSL-L

Query:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
         N+     RI+ ESD+   + +LN D D +   +   +D++        V + F+ R  N  A  +AR+ +
Subjt:  VNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)6.8e-0726.5Show/hide
Query:  IWGIWNHRNLVKNNSIKAYPNSIFRS--------IEANLDGIQYLSDDSKVPPRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFI
        +W +W  RN      I  +P  + +         +E  ++     S  ++ P    +  S+ WSPPP+ + K N D+ + + +      WI RDSNG  I
Subjt:  IWGIWNHRNLVKNNSIKAYPNSIFRS--------IEANLDGIQYLSDDSKVPPRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFI

Query:  FAGFKKMKKNWSILCLE
         +G  K+++++S L  E
Subjt:  FAGFKKMKKNWSILCLE

AT4G29090.1 Ribonuclease H-like superfamily protein7.2e-1724.42Show/hide
Query:  SNRESVNHCIWDCKIAKQVWIRYFPNLQDSGDSFREKWTPMDKWTSFSNFFNEEDRRKAIS--IIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLD--GI
        S +E+VNH ++ C  A+  W      +   G+     +  +    +  N   + ++   +   ++W +W +RN +     +     + R  E +L+   I
Subjt:  SNRESVNHCIWDCKIAKQVWIRYFPNLQDSGDSFREKWTPMDKWTSFSNFFNEEDRRKAIS--IIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLD--GI

Query:  QYLSDDSKVPPRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVE
        +  ++     P+    S   W PPP  + K NTDA W+ +    G+GW+ R+  G   + G + + K  S+L  EL+A+   + SL     N    ++ E
Subjt:  QYLSDDSKVPPRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVE

Query:  SDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
        SDS   I ILN+D +++   +    D++        V + F  R+ N  A  +AR+ L
Subjt:  SDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-0721.94Show/hide
Query:  IIWGIWNHRN-LVKNNSIKAYPNSIFRSIEANLDGI-QYLSDDSKVPPRFKNHS-SQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGF
        ++W IW   N LV N++   +  ++  ++    + +   ++++ +   R  + S +  WSPP ++  K N DA+  E   + GLGWI R+S G+ I  G 
Subjt:  IIWGIWNHRN-LVKNNSIKAYPNSIFRSIEANLDGI-QYLSDDSKVPPRFKNHS-SQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGF

Query:  KKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL
         K +   +    E   +   + ++  ++G    +++ E D+     ++N  S      +   D ++        + + F  R+ N  A  LA+Q +
Subjt:  KKMKKNWSILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCATAAACTGATTGGAAAAGTTCAAAATATAGAGATCCAACACTTGAACTACCATCAATCGGATCATAGGCCGATTCTTGCCCAGATAAAATGTGAAGTCAG
TAGGAAAGGCAATAAGCAGAGAAGATTGAGCAAACACAAATTTGAGGAAAGTTGGCTCCAATTTGAAGCTTGCAAAAATATTGTCAAAGAAGTCTGGAACATGGGAAGGA
AGAATAATGCTTTTGACATCAACAACAAAGTGGAAGACATCCTTTCAAAGCTTTACCAGTGGAATAAAGAAAGACTTCAAGGATCCATTCAGGGGGCTATTGAAAGGAAA
AACAATGAGATCCAATGGCTTGATCAGAGGCAAGATGATGTTAGGGAAGAGGATATTATCAAAGCGGAAACAGAGCTTAGCAAACTTTTGGAGGAAGAAGAAATGTATTG
GAAAATCCGCTCTAGGGAAGACTGGCTGCATTGGGGTGATAAAAATACAAAGTGGTTCCACTCAAAGGCATCTCAAAGAAAAAGAAAAAACAATATTGAGGGGATAAAAG
ACGACCATGGAAATTGGGTGGAGGATGAAGAAGAGATTGGTAGGGTGGCTGTTGAATACTTTAACAAGCTCTTCATTTCTACTAATCCAGACCAGAGGAAGTTGGAAGAA
GCCACCAGCAGCATCAAAGTCAGGAAAGCCTTAATCAATTCGCCTTTTCTTGCCAATAAGAATGAAAACGCAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACA
GAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCCTTCACGTATCTAATAGGGAGTCGGTCAACCATTGCATTTGGGACTGTAAGATTGCAAAACAGG
TTTGGATTCGTTACTTCCCTAACTTACAAGACTCGGGTGATTCTTTCAGGGAAAAGTGGACGCCGATGGACAAATGGACGAGTTTTTCAAATTTTTTCAATGAAGAAGAT
CGAAGGAAAGCGATCAGCATTATTTGGGGCATTTGGAACCACAGGAATTTGGTGAAGAACAACTCGATAAAAGCATATCCCAACTCAATTTTCAGATCAATTGAAGCCAA
TTTGGATGGAATTCAATACCTGAGTGATGACAGTAAGGTCCCTCCAAGATTCAAGAACCATTCGAGTCAGAGTTGGTCTCCCCCTCCGCAGAACTTCTGGAAATTAAACA
CAGATGCAGCTTGGTCTGAAGAAAAAGGCATTGGGGGTTTAGGTTGGATAGCTCGTGACTCTAACGGATCTTTTATCTTCGCTGGGTTCAAGAAAATGAAGAAGAATTGG
TCGATCTTATGCCTAGAGCTGAAAGCAATTGAGGAAGGTCTCAGAAGCTTACTTGTTAATTTTGGAAATCCCCTCCCTCGTATCCTAGTGGAATCGGATTCAGCCAATGC
GATCGCCATCCTCAACCATGATTCCGATGTCTACTCGGAAAGCAGGACGGTGGCGGACGATGTGGAGGTTGCGGCGGAGATGATCGGCAGAGTTTCTTACCGTTTCAGCC
GGCGGGATTCCAACATTGAAGCGCATCTTCTAGCGCGTCAGGGCCTGGTTCACGAGTCTGTGGGTGGGTCTAACTCGGGGTTTTTGGACTCTTCCAATTCGGAAGAGGAG
AACAAGAGGGTTTTGGTCGAGGCAGATGGGGTGGAAAAGAGTACCAGGATGAAGTTGCGGCGGCGCGTGTCGGTGTACGTGGTGGATTGGAATGATTCGGCCAAGCCGCC
AAGGGCGCTACTGCTGCTGGGGCTTGGGAAACGCCGCCGTGGAGGCGCCAGAGTGGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCATAAACTGATTGGAAAAGTTCAAAATATAGAGATCCAACACTTGAACTACCATCAATCGGATCATAGGCCGATTCTTGCCCAGATAAAATGTGAAGTCAG
TAGGAAAGGCAATAAGCAGAGAAGATTGAGCAAACACAAATTTGAGGAAAGTTGGCTCCAATTTGAAGCTTGCAAAAATATTGTCAAAGAAGTCTGGAACATGGGAAGGA
AGAATAATGCTTTTGACATCAACAACAAAGTGGAAGACATCCTTTCAAAGCTTTACCAGTGGAATAAAGAAAGACTTCAAGGATCCATTCAGGGGGCTATTGAAAGGAAA
AACAATGAGATCCAATGGCTTGATCAGAGGCAAGATGATGTTAGGGAAGAGGATATTATCAAAGCGGAAACAGAGCTTAGCAAACTTTTGGAGGAAGAAGAAATGTATTG
GAAAATCCGCTCTAGGGAAGACTGGCTGCATTGGGGTGATAAAAATACAAAGTGGTTCCACTCAAAGGCATCTCAAAGAAAAAGAAAAAACAATATTGAGGGGATAAAAG
ACGACCATGGAAATTGGGTGGAGGATGAAGAAGAGATTGGTAGGGTGGCTGTTGAATACTTTAACAAGCTCTTCATTTCTACTAATCCAGACCAGAGGAAGTTGGAAGAA
GCCACCAGCAGCATCAAAGTCAGGAAAGCCTTAATCAATTCGCCTTTTCTTGCCAATAAGAATGAAAACGCAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACA
GAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCCTTCACGTATCTAATAGGGAGTCGGTCAACCATTGCATTTGGGACTGTAAGATTGCAAAACAGG
TTTGGATTCGTTACTTCCCTAACTTACAAGACTCGGGTGATTCTTTCAGGGAAAAGTGGACGCCGATGGACAAATGGACGAGTTTTTCAAATTTTTTCAATGAAGAAGAT
CGAAGGAAAGCGATCAGCATTATTTGGGGCATTTGGAACCACAGGAATTTGGTGAAGAACAACTCGATAAAAGCATATCCCAACTCAATTTTCAGATCAATTGAAGCCAA
TTTGGATGGAATTCAATACCTGAGTGATGACAGTAAGGTCCCTCCAAGATTCAAGAACCATTCGAGTCAGAGTTGGTCTCCCCCTCCGCAGAACTTCTGGAAATTAAACA
CAGATGCAGCTTGGTCTGAAGAAAAAGGCATTGGGGGTTTAGGTTGGATAGCTCGTGACTCTAACGGATCTTTTATCTTCGCTGGGTTCAAGAAAATGAAGAAGAATTGG
TCGATCTTATGCCTAGAGCTGAAAGCAATTGAGGAAGGTCTCAGAAGCTTACTTGTTAATTTTGGAAATCCCCTCCCTCGTATCCTAGTGGAATCGGATTCAGCCAATGC
GATCGCCATCCTCAACCATGATTCCGATGTCTACTCGGAAAGCAGGACGGTGGCGGACGATGTGGAGGTTGCGGCGGAGATGATCGGCAGAGTTTCTTACCGTTTCAGCC
GGCGGGATTCCAACATTGAAGCGCATCTTCTAGCGCGTCAGGGCCTGGTTCACGAGTCTGTGGGTGGGTCTAACTCGGGGTTTTTGGACTCTTCCAATTCGGAAGAGGAG
AACAAGAGGGTTTTGGTCGAGGCAGATGGGGTGGAAAAGAGTACCAGGATGAAGTTGCGGCGGCGCGTGTCGGTGTACGTGGTGGATTGGAATGATTCGGCCAAGCCGCC
AAGGGCGCTACTGCTGCTGGGGCTTGGGAAACGCCGCCGTGGAGGCGCCAGAGTGGATTTTTGA
Protein sequenceShow/hide protein sequence
MANHKLIGKVQNIEIQHLNYHQSDHRPILAQIKCEVSRKGNKQRRLSKHKFEESWLQFEACKNIVKEVWNMGRKNNAFDINNKVEDILSKLYQWNKERLQGSIQGAIERK
NNEIQWLDQRQDDVREEDIIKAETELSKLLEEEEMYWKIRSREDWLHWGDKNTKWFHSKASQRKRKNNIEGIKDDHGNWVEDEEEIGRVAVEYFNKLFISTNPDQRKLEE
ATSSIKVRKALINSPFLANKNENAATLLCEHHQSATQNISVSTDIDQYYKSVLHVSNRESVNHCIWDCKIAKQVWIRYFPNLQDSGDSFREKWTPMDKWTSFSNFFNEED
RRKAISIIWGIWNHRNLVKNNSIKAYPNSIFRSIEANLDGIQYLSDDSKVPPRFKNHSSQSWSPPPQNFWKLNTDAAWSEEKGIGGLGWIARDSNGSFIFAGFKKMKKNW
SILCLELKAIEEGLRSLLVNFGNPLPRILVESDSANAIAILNHDSDVYSESRTVADDVEVAAEMIGRVSYRFSRRDSNIEAHLLARQGLVHESVGGSNSGFLDSSNSEEE
NKRVLVEADGVEKSTRMKLRRRVSVYVVDWNDSAKPPRALLLLGLGKRRRGGARVDF