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Spg032881 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032881
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:13341961..13343547
RNA-Seq ExpressionSpg032881
SyntenySpg032881
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.4e-1535.26Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE---------------MAAAPSNEQLNAAVR-----------------KQRL
        +VR+FYAN+ +     V VRGV V WS EAIN+++ L D    H+ + E               +A A  N     A                   K  L
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE---------------MAAAPSNEQLNAAVR-----------------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARLQRTQE
        LPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+  TQE
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.7e-2532.13Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDFPHTGYNE----------------MAAAPSNEQLNA-----AVR--------------KQR
        +VR+FYAN+ + E   V VRGV V WS EAIN+++ L D P   ++E                +AAA +   ++A      +R              K R
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDFPHTGYNE----------------MAAAPSNEQLNA-----AVR--------------KQR

Query:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQEA--
        LLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+      + TQ+   
Subjt:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQEA--

Query:  ---------RQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDD
                 R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P P  P F  ++L         E ++D  
Subjt:  ---------RQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDD

Query:  DAGQE
        +   E
Subjt:  DAGQE

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]1.7e-1433.51Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDF--PHTGYNEMAAAPS--------------------------NEQLNAAVR------KQRL
        +VR+FY N+   +   V VRGV V  S EAIN++Y L D    H+ + E    P                              LN   +      K RL
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDF--PHTGYNEMAAAPS--------------------------NEQLNAAVR------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL
        LPTTH   VS+ERVLL +++L   SI++G++I  EI  C  +K G LFFP+ I  +C+    P    +  L + G ID   +AR+
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.5e-1834.13Show/hide
Query:  KQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQE
        K RLLPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L   G ID   +AR+      + TQ+
Subjt:  KQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQE

Query:  -----------ARQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREE
                   +R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P P  P F  +LL         E ++
Subjt:  -----------ARQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREE

Query:  DDDDAGQE
        D  +   E
Subjt:  DDDDAGQE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.8e-2532.42Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE-------------MAAAPSNEQLNA-----AVR--------------KQRL
        +VR+FYAN+ + E   + VRGV V WS EAIN+++ L D    H+ + E             +AAA +   ++A      +R              K RL
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE-------------MAAAPSNEQLNA-----AVR--------------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL--------------Q
        LPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+               
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL--------------Q

Query:  RTQEARQGGLVCGIHQILEQLTLSANRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDDDAGQE
        R   A        + Q L+ L    ++QE   +Q   FW Y K RD AL+KALQ NF++P P  P F  ++L         E ++D  +   E
Subjt:  RTQEARQGGLVCGIHQILEQLTLSANRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDDDAGQE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.1e-1535.26Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE---------------MAAAPSNEQLNAAVR-----------------KQRL
        +VR+FYAN+ +     V VRGV V WS EAIN+++ L D    H+ + E               +A A  N     A                   K  L
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE---------------MAAAPSNEQLNAAVR-----------------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARLQRTQE
        LPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+  TQE
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.3e-2532.13Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDFPHTGYNE----------------MAAAPSNEQLNA-----AVR--------------KQR
        +VR+FYAN+ + E   V VRGV V WS EAIN+++ L D P   ++E                +AAA +   ++A      +R              K R
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDFPHTGYNE----------------MAAAPSNEQLNA-----AVR--------------KQR

Query:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQEA--
        LLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+      + TQ+   
Subjt:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQEA--

Query:  ---------RQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDD
                 R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P P  P F  ++L         E ++D  
Subjt:  ---------RQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDD

Query:  DAGQE
        +   E
Subjt:  DAGQE

A0A2P5BNT0 Uncharacterized protein (Fragment)8.1e-1533.51Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDF--PHTGYNEMAAAPS--------------------------NEQLNAAVR------KQRL
        +VR+FY N+   +   V VRGV V  S EAIN++Y L D    H+ + E    P                              LN   +      K RL
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDF--PHTGYNEMAAAPS--------------------------NEQLNAAVR------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL
        LPTTH   VS+ERVLL +++L   SI++G++I  EI  C  +K G LFFP+ I  +C+    P    +  L + G ID   +AR+
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL

A0A2P5CEY2 Uncharacterized protein7.1e-1934.13Show/hide
Query:  KQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQE
        K RLLPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L   G ID   +AR+      + TQ+
Subjt:  KQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL------QRTQE

Query:  -----------ARQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREE
                   +R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P P  P F  +LL         E ++
Subjt:  -----------ARQGGLVCGIHQILEQLTLSANRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREE

Query:  DDDDAGQE
        D  +   E
Subjt:  DDDDAGQE

A0A2P5DXM3 Uncharacterized protein1.3e-2532.42Show/hide
Query:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE-------------MAAAPSNEQLNA-----AVR--------------KQRL
        +VR+FYAN+ + E   + VRGV V WS EAIN+++ L D    H+ + E             +AAA +   ++A      +R              K RL
Subjt:  VVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQD--FPHTGYNE-------------MAAAPSNEQLNA-----AVR--------------KQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL--------------Q
        LPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID   +AR+               
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARL--------------Q

Query:  RTQEARQGGLVCGIHQILEQLTLSANRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDDDAGQE
        R   A        + Q L+ L    ++QE   +Q   FW Y K RD AL+KALQ NF++P P  P F  ++L         E ++D  +   E
Subjt:  RTQEARQGGLVCGIHQILEQLTLSANRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDDDAGQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACAAGAGGAAGAAAAGAGAGAGAAGTGGAGGAGGACATAGCTGTTACGCCTGAAGCTCCGAAGAAGAAGGCGAAGAAGAAAAGAACGCCTGCAGAAAGGGA
AGCCAAGAAGCTTAGAAAAATTCAAGAGGCTGAAGTTTCTGAAGTACTACAGAGGGTCATTGAGGACATTGCAGAAGAGGTAGTCACTGAGGAAGAACCGAAAGATCCCG
AAAAAGAAAATGATCCGAAAAAGACTGTTGAAATAGAGGAGAATCAAGAAAAGGCAGCAGAGGATATGCAAACGCAGGGTAATCACGCAACAGAAAAAGCAGGGCGGATT
AGAAGGATTAGGACTGACACTCCACGCTCGACTGAATCGGAAAAAGAGGAACCTATGAATCTAGAAGAAGCTGAAAAGGAAGCTGTAGAAGGTGAAACTGAAAAGGAAAC
TCATAAAGATAAGGGCAAAGATATTGCAGGAGTAGAGGTTGAAGCAGAAGTGCAAGGCCAGAGGAAAGGAGAGCCTATGAATTCGCAAGTGGTGCGAGATTTCTACGCGA
ATATCAACGAGGAAGAGGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGACTGGAGTCTCGAAGCCATTAATTCACTGTACAATCTTCAGGACTTCCCGCATACTGGT
TATAATGAGATGGCGGCAGCGCCATCTAACGAGCAGTTGAATGCTGCTGTTCGGAAGCAAAGGCTGCTTCCAACAACTCATGACTCCACGGTCTCTCGGGAAAGAGTTCT
TTTGGCTTTTGCAATTTTAAGGTCTCTTAGCATCGACGTGGGTAAGATTATTGCTGGTGAAATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCGAATA
CAATCTCAATGCTTTGTAAGAGAGTTGGAGTTCCAGAAAGCACAGAAGATGTGATACTATTGGACAAGGGAATAATTGACACGCCTAACTTGGCTCGGCTTCAGCGTACA
CAGGAAGCACGCCAAGGGGGGCTAGTTTGTGGCATTCACCAAATCTTAGAACAACTCACTCTTTCAGCCAATAGGCAAGAGTTCGCCGAGAGGCAGGCTCACACCTTCTG
GAATTATGTTAAAAGACGTGATGCCGCATTGAGAAAGGCACTGCAAGCAAACTTTTCAAAGCCCTATCCAGCCATTCCTTTATTCTCTGATGATTTACTGAACCCTTGGA
TCTCACCACCACCCGTTGAGAGAGAAGAGGACGATGATGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACAAGAGGAAGAAAAGAGAGAGAAGTGGAGGAGGACATAGCTGTTACGCCTGAAGCTCCGAAGAAGAAGGCGAAGAAGAAAAGAACGCCTGCAGAAAGGGA
AGCCAAGAAGCTTAGAAAAATTCAAGAGGCTGAAGTTTCTGAAGTACTACAGAGGGTCATTGAGGACATTGCAGAAGAGGTAGTCACTGAGGAAGAACCGAAAGATCCCG
AAAAAGAAAATGATCCGAAAAAGACTGTTGAAATAGAGGAGAATCAAGAAAAGGCAGCAGAGGATATGCAAACGCAGGGTAATCACGCAACAGAAAAAGCAGGGCGGATT
AGAAGGATTAGGACTGACACTCCACGCTCGACTGAATCGGAAAAAGAGGAACCTATGAATCTAGAAGAAGCTGAAAAGGAAGCTGTAGAAGGTGAAACTGAAAAGGAAAC
TCATAAAGATAAGGGCAAAGATATTGCAGGAGTAGAGGTTGAAGCAGAAGTGCAAGGCCAGAGGAAAGGAGAGCCTATGAATTCGCAAGTGGTGCGAGATTTCTACGCGA
ATATCAACGAGGAAGAGGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGACTGGAGTCTCGAAGCCATTAATTCACTGTACAATCTTCAGGACTTCCCGCATACTGGT
TATAATGAGATGGCGGCAGCGCCATCTAACGAGCAGTTGAATGCTGCTGTTCGGAAGCAAAGGCTGCTTCCAACAACTCATGACTCCACGGTCTCTCGGGAAAGAGTTCT
TTTGGCTTTTGCAATTTTAAGGTCTCTTAGCATCGACGTGGGTAAGATTATTGCTGGTGAAATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCGAATA
CAATCTCAATGCTTTGTAAGAGAGTTGGAGTTCCAGAAAGCACAGAAGATGTGATACTATTGGACAAGGGAATAATTGACACGCCTAACTTGGCTCGGCTTCAGCGTACA
CAGGAAGCACGCCAAGGGGGGCTAGTTTGTGGCATTCACCAAATCTTAGAACAACTCACTCTTTCAGCCAATAGGCAAGAGTTCGCCGAGAGGCAGGCTCACACCTTCTG
GAATTATGTTAAAAGACGTGATGCCGCATTGAGAAAGGCACTGCAAGCAAACTTTTCAAAGCCCTATCCAGCCATTCCTTTATTCTCTGATGATTTACTGAACCCTTGGA
TCTCACCACCACCCGTTGAGAGAGAAGAGGACGATGATGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MAKTRGRKEREVEEDIAVTPEAPKKKAKKKRTPAEREAKKLRKIQEAEVSEVLQRVIEDIAEEVVTEEEPKDPEKENDPKKTVEIEENQEKAAEDMQTQGNHATEKAGRI
RRIRTDTPRSTESEKEEPMNLEEAEKEAVEGETEKETHKDKGKDIAGVEVEAEVQGQRKGEPMNSQVVRDFYANINEEEGFQVIVRGVAVDWSLEAINSLYNLQDFPHTG
YNEMAAAPSNEQLNAAVRKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRVGVPESTEDVILLDKGIIDTPNLARLQRT
QEARQGGLVCGIHQILEQLTLSANRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYPAIPLFSDDLLNPWISPPPVEREEDDDDAGQED