CuGenDBv2

Gene ID	Spg032883
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase
Genome location	scaffold11:15697548..15701910
RNA-Seq Expression	Spg032883
Synteny	Spg032883
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAB1210637.1 hypothetical protein CJ030_MR6G010321 [Morella rubra]

4.5e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

KAG6735399.1 hypothetical protein POTOM_062040 [Populus tomentosa]

4.5e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

PLY71578.1 hypothetical protein LSAT_1X88180 [Lactuca sativa]

4.5e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

PWA76046.1 hypothetical protein CTI12_AA236480 [Artemisia annua]

4.5e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

PWA91043.1 hypothetical protein CTI12_AA094830 [Artemisia annua]

4.5e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

TrEMBL top hits

e value

%identity

Alignment

A0A2N9HQ72 Uncharacterized protein

2.2e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

A0A2N9HR91 Uncharacterized protein

2.2e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

A0A2N9I3B0 Uncharacterized protein

2.2e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

A0A2N9I7K2 Uncharacterized protein

2.2e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

A0A6A1VFM0 Uncharacterized protein

2.2e-38

95.29

Show/hide

Query:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS
        NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCR+IPAG +NPSLSRLCYRRLWGSRNRRALILG AYYLDAFS
Subjt:  NKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGCGTCCAGCAACTCGAGCCTTGTGCTGGAAAATCTGAGTTAGCCTCGAATTTCTGTTCTGCAACGCCGTCTTTGCTCAAATCGTGCTGGAATTTTAATGTAGCGTT
GATTTTCTGTTCTGCAGCACCGCCTAAGTGTTCGATTGAGTTCGATACACTTCAACGTGGTCACCCACCACCCAAGGAGTGTTCTAACATGTTGTTCGAGGAGCTTATCT
TGGTTGCATTAGGCTTGCTAAGGTTGCTTGGAAGCGTTATAGGGGCAAGACCGAATGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTTCTTCCCCTATTGGGGT
CCATTAGGTCCCACTGGTAGCTCGAACAAGGTCCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAA
CGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCGCCATCCCCGCAGGGGTAAAGAACCCATCGCTGTCTCGGCTGTGCTACCGAAGGCTCTGGG
GAAGTCGGAATAGGAGAGCACTCATCTTGGGGTCGGCTTACTACTTAGATGCTTTCAGCAGATTAAATAAAATTAATTACGAATCGGTCCCAATCACGCTTTCGCTTTAC
GGAATTACGGAATTCCAATCCCTACACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRVQQLEPCAGKSELASNFCSATPSLLKSCWNFNVALIFCSAAPPKCSIEFDTLQRGHPPPKECSNMLFEELILVALGLLRLLGSVIGARPNGAGNITVQDGIHFFPYWG
PLGPTGSSNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRAIPAGVKNPSLSRLCYRRLWGSRNRRALILGSAYYLDAFSRLNKINYESVPITLSLY
GITEFQSLH

Spg032883 (gene) of Sponge gourd (cylindrica) v1 genome