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Spg032921 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032921
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Genome locationscaffold11:15970395..15980124
RNA-Seq ExpressionSpg032921
SyntenySpg032921
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580937.1 hypothetical protein SDJN03_20939, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3058.82Show/hide
Query:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH
        N+H   + +R      RHSDVP WEKKFCSSVG     ++L+ K CM     VVKWND+A E+AFH+AK+RFWAKI GLPCNISLPDP+I+I EIDWNC 
Subjt:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH

Query:  IDIDLLLELERQPKAPLVG
        +D DL+L+LE +  +P+VG
Subjt:  IDIDLLLELERQPKAPLVG

KAG7017682.1 hypothetical protein SDJN02_19548 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3058.82Show/hide
Query:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH
        N+H   + +R      RHSDVP WEKKFCSSVG     ++L+ K CM     VVKWND+A E+AFH+AK+RFWAKI GLPCNISLPDP+I+I EIDWNC 
Subjt:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH

Query:  IDIDLLLELERQPKAPLVG
        +D DL+L+LE +  +P+VG
Subjt:  IDIDLLLELERQPKAPLVG

XP_008443354.1 PREDICTED: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550 isoform X1 [Cucumis melo]1.9e-3165.71Show/hide
Query:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL
        H+ VP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWA+I GLPC+ISLPDP+IYI EIDWNC++D DLLL+LER+  AP 
Subjt:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL

Query:  VGVGE
        V  G+
Subjt:  VGVGE

XP_022153947.1 uncharacterized protein LOC111021336 isoform X1 [Momordica charantia]6.3e-3562.6Show/hide
Query:  VTNKHSRRRESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH
        VT    + R +RL  W HSDVP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWAKI GLPC+IS+PDP IYI EIDWNC 
Subjt:  VTNKHSRRRESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH

Query:  IDIDLLLELERQPKAPLVGVGEK
        +D DLLL+LER+P  P+V  G++
Subjt:  IDIDLLLELERQPKAPLVGVGEK

XP_038903128.1 uncharacterized protein LOC120089802 isoform X1 [Benincasa hispida]5.9e-3364.35Show/hide
Query:  RESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLE
        R   L  W HSDVP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWAKI GLPC+I LPDP+IYI EIDWNC++D DLLL+
Subjt:  RESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLE

Query:  LERQPKAPLVGVGEK
        LER+  AP+V  G++
Subjt:  LERQPKAPLVGVGEK

TrEMBL top hitse value%identityAlignment
A0A0A0LC07 Uncharacterized protein1.3e-3066Show/hide
Query:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL
        H+ VP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWA+I GLPC+ISLPDP+IYI EIDWNC++D DL+L+LER+  AP+
Subjt:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL

A0A1S3B7T3 probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550 isoform X19.2e-3265.71Show/hide
Query:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL
        H+ VP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWA+I GLPC+ISLPDP+IYI EIDWNC++D DLLL+LER+  AP 
Subjt:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL

Query:  VGVGE
        V  G+
Subjt:  VGVGE

A0A5A7UD00 Putative cyclin-dependent serine/threonine-protein kinase9.2e-3265.71Show/hide
Query:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL
        H+ VP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWA+I GLPC+ISLPDP+IYI EIDWNC++D DLLL+LER+  AP 
Subjt:  HSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPL

Query:  VGVGE
        V  G+
Subjt:  VGVGE

A0A6J1DKC4 uncharacterized protein LOC111021336 isoform X13.1e-3562.6Show/hide
Query:  VTNKHSRRRESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH
        VT    + R +RL  W HSDVP WEKKFCSSVG     ++L+TK CM     VVKWNDSAGE+AFH+AK+RFWAKI GLPC+IS+PDP IYI EIDWNC 
Subjt:  VTNKHSRRRESRLKKWRHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH

Query:  IDIDLLLELERQPKAPLVGVGEK
        +D DLLL+LER+P  P+V  G++
Subjt:  IDIDLLLELERQPKAPLVGVGEK

A0A6J1J8U4 uncharacterized protein DDB_G02899173.0e-3058.82Show/hide
Query:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH
        N+H   + +R      RHSDVP WEKKFCSSVG     ++L+TK CM     VVKWND+A E+AFH+AK+RFWAKI GL CNISLPDP+I+I EIDWNC 
Subjt:  NKHSRRRESRLKKW--RHSDVPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCH

Query:  IDIDLLLELERQPKAPLVG
        +D DL+L+LE +  +P+VG
Subjt:  IDIDLLLELERQPKAPLVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-0429.13Show/hide
Query:  AKVQAILQALRFLQRLQLREVRMYSDSINAISMINKDLETTTDVAHWIVNIQEMCKEFHAVSFHYVSRDRNLRVDVIAKHALANNSTMLWLSDFPTWLLS
        A+  A++ A++    L  R V    D+I  ++ + ++ ET   + +++  IQ+  K F  V F +  R++N+ VDV+AK A+AN+         P +L+S
Subjt:  AKVQAILQALRFLQRLQLREVRMYSDSINAISMINKDLETTTDVAHWIVNIQEMCKEFHAVSFHYVSRDRNLRVDVIAKHALANNSTMLWLSDFPTWLLS

Query:  MGN
          N
Subjt:  MGN

AT3G51940.1 unknown protein1.8e-1938.66Show/hide
Query:  HSRRRESRLKKWRHSD------VPWWEKKFCSSVG-----RVLETKGCM------VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDW
        H RR   R    R S       +P WEK+FC  +G     +V+E K         V+ W+DSA E  FH+ K RFW+++ GL C++S+PDP++YI E+DW
Subjt:  HSRRRESRLKKWRHSD------VPWWEKKFCSSVG-----RVLETKGCM------VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDW

Query:  NCHIDIDLLLELERQPKAP
        +  +D +L+ +LE+   AP
Subjt:  NCHIDIDLLLELERQPKAP

AT5G03990.1 unknown protein4.5e-2351.61Show/hide
Query:  VPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQP
        VP WEK FC+ +G     +V+E K  M     VV+W+DSAGE AF +AK+RFWA+I GL C++SLPDP++YI ++DW+  +D +L+L+LER P
Subjt:  VPWWEKKFCSSVG-----RVLETKGCM-----VVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGGATCGCCCCGGTTCCGCCTGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGATCATCTTCGGCGTGCGATTCTCTCCGGTCAGCA
GCAACCCTTGCGCGTCTTCTCCGGCGGCACTTCGGTTCAACGGCGACTTTTCTTCTCGTTTTGCTTAGACAGCCGTGGGGGTTTGCTGCGCGTGGGTCTTCAGCAGCAAG
CAGCGGCGGGGGGCGTCCTCTGGCGACAGCAAGCAGCGGCGGCGCGGAGGTTTCAGTTTGCGGCCGAGATTGAGACGATTGATCACGCGTTATGCGGTTGTATACGCGCG
AAGTCAATATGTGATTCAATATTCACTCGGATAGATACTCATATATTGGTTAGTAACAATTTTGTCGACCGCATCATTTTCCTAGCAGCAAATTTGTTAACAAGTGAGTT
CGAGAAATCTTTTATCGCCTTTTGGTCCATTTGGAATAATAGGAATTCGATACGAGAAGGCAAGCCAGTTGTCGAATGGTATCAACAGACTGAATGGATCATCAAATATT
GGGAAGAAACAACTCACAAGAGAAGAGTAAGGCATGGTATCGCTCCTAATCCTTATGAGCAAATCTTTACATCAACTCCCCATTCCGTTCATGTATATACCGATGCAACA
GTAAAACCCATTTGTATAGGAGCGGGATTGGGTGTGTGTATTATGGGGTCGGGTGATACTATATATGGCGCAATGGAGATGGTTGAAAATATGAATTTAAATCCATTGGC
AGCTAAGGTTCAGGCAATTCTCCAAGCTCTTCGTTTTCTTCAACGTTTACAACTCCGCGAGGTTCGTATGTATTCTGATTCTATTAATGCCATCAGTATGATCAATAAGG
ATTTGGAAACGACAACAGATGTGGCTCATTGGATAGTCAATATTCAAGAGATGTGTAAGGAATTCCATGCTGTTTCTTTCCATTATGTATCTAGAGATAGAAATTTAAGA
GTCGATGTTATAGCCAAACATGCTTTGGCTAACAATAGTACCATGTTGTGGTTATCTGATTTCCCGACATGGTTGTTGTCTATGGGCAATGTTGCCCATTGCAAATGTAC
TGACAACAAGTATGCTTTAGGTGTAAAATTAATAGGGTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAGTACAATGTTATTGTTCATG
TTTCATACCTTGTTGGAGAAGGCAGAGCGGTGAAATTGGTCACCAACAAGCACTCAAGGCGACGAGAAAGCCGTCTGAAGAAATGGCGGCACTCGGACGTGCCATGGTGG
GAAAAGAAGTTTTGTTCCTCTGTCGGGAGGGTATTGGAGACTAAGGGGTGTATGGTAGTTAAATGGAATGACTCAGCTGGAGAAAAAGCGTTTCACCATGCAAAGACTAG
GTTTTGGGCAAAAATCAAAGGCCTACCTTGCAATATATCACTGCCCGATCCTGAAATTTATATCGTTGAGATCGATTGGAATTGCCATATTGACATTGATCTGCTGTTAG
AGCTGGAACGGCAACCAAAGGCCCCTTTAGTTGGAGTTGGAGAGAAACATATGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGGATCGCCCCGGTTCCGCCTGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGATCATCTTCGGCGTGCGATTCTCTCCGGTCAGCA
GCAACCCTTGCGCGTCTTCTCCGGCGGCACTTCGGTTCAACGGCGACTTTTCTTCTCGTTTTGCTTAGACAGCCGTGGGGGTTTGCTGCGCGTGGGTCTTCAGCAGCAAG
CAGCGGCGGGGGGCGTCCTCTGGCGACAGCAAGCAGCGGCGGCGCGGAGGTTTCAGTTTGCGGCCGAGATTGAGACGATTGATCACGCGTTATGCGGTTGTATACGCGCG
AAGTCAATATGTGATTCAATATTCACTCGGATAGATACTCATATATTGGTTAGTAACAATTTTGTCGACCGCATCATTTTCCTAGCAGCAAATTTGTTAACAAGTGAGTT
CGAGAAATCTTTTATCGCCTTTTGGTCCATTTGGAATAATAGGAATTCGATACGAGAAGGCAAGCCAGTTGTCGAATGGTATCAACAGACTGAATGGATCATCAAATATT
GGGAAGAAACAACTCACAAGAGAAGAGTAAGGCATGGTATCGCTCCTAATCCTTATGAGCAAATCTTTACATCAACTCCCCATTCCGTTCATGTATATACCGATGCAACA
GTAAAACCCATTTGTATAGGAGCGGGATTGGGTGTGTGTATTATGGGGTCGGGTGATACTATATATGGCGCAATGGAGATGGTTGAAAATATGAATTTAAATCCATTGGC
AGCTAAGGTTCAGGCAATTCTCCAAGCTCTTCGTTTTCTTCAACGTTTACAACTCCGCGAGGTTCGTATGTATTCTGATTCTATTAATGCCATCAGTATGATCAATAAGG
ATTTGGAAACGACAACAGATGTGGCTCATTGGATAGTCAATATTCAAGAGATGTGTAAGGAATTCCATGCTGTTTCTTTCCATTATGTATCTAGAGATAGAAATTTAAGA
GTCGATGTTATAGCCAAACATGCTTTGGCTAACAATAGTACCATGTTGTGGTTATCTGATTTCCCGACATGGTTGTTGTCTATGGGCAATGTTGCCCATTGCAAATGTAC
TGACAACAAGTATGCTTTAGGTGTAAAATTAATAGGGTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAGTACAATGTTATTGTTCATG
TTTCATACCTTGTTGGAGAAGGCAGAGCGGTGAAATTGGTCACCAACAAGCACTCAAGGCGACGAGAAAGCCGTCTGAAGAAATGGCGGCACTCGGACGTGCCATGGTGG
GAAAAGAAGTTTTGTTCCTCTGTCGGGAGGGTATTGGAGACTAAGGGGTGTATGGTAGTTAAATGGAATGACTCAGCTGGAGAAAAAGCGTTTCACCATGCAAAGACTAG
GTTTTGGGCAAAAATCAAAGGCCTACCTTGCAATATATCACTGCCCGATCCTGAAATTTATATCGTTGAGATCGATTGGAATTGCCATATTGACATTGATCTGCTGTTAG
AGCTGGAACGGCAACCAAAGGCCCCTTTAGTTGGAGTTGGAGAGAAACATATGAAGTGA
Protein sequenceShow/hide protein sequence
MPGSPRFRLVTSSPASTNSLLVSREDHLRRAILSGQQQPLRVFSGGTSVQRRLFFSFCLDSRGGLLRVGLQQQAAAGGVLWRQQAAAARRFQFAAEIETIDHALCGCIRA
KSICDSIFTRIDTHILVSNNFVDRIIFLAANLLTSEFEKSFIAFWSIWNNRNSIREGKPVVEWYQQTEWIIKYWEETTHKRRVRHGIAPNPYEQIFTSTPHSVHVYTDAT
VKPICIGAGLGVCIMGSGDTIYGAMEMVENMNLNPLAAKVQAILQALRFLQRLQLREVRMYSDSINAISMINKDLETTTDVAHWIVNIQEMCKEFHAVSFHYVSRDRNLR
VDVIAKHALANNSTMLWLSDFPTWLLSMGNVAHCKCTDNKYALGVKLIGLSAFDLQLLPHVLYEHLQYNVIVHVSYLVGEGRAVKLVTNKHSRRRESRLKKWRHSDVPWW
EKKFCSSVGRVLETKGCMVVKWNDSAGEKAFHHAKTRFWAKIKGLPCNISLPDPEIYIVEIDWNCHIDIDLLLELERQPKAPLVGVGEKHMK