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Spg032930 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032930
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionchromatin remodeling protein EBS isoform X2
Genome locationscaffold11:14427084..14433201
RNA-Seq ExpressionSpg032930
SyntenySpg032930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040219.1 chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa]7.8e-0451.79Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ
        HPSCMGMTIEEAKKLDHFLCSD S    A  S       + P+ +A V++  ++ Q
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ
KAF3960010.1 hypothetical protein CMV_015239 [Castanea mollissima]6.0e-0460Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  + P+V+A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
KAF3966881.1 hypothetical protein CMV_009064 [Castanea mollissima]2.7e-0462Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  L P+V+A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
KAF9862980.1 hypothetical protein H0E87_013695 [Populus deltoides]7.8e-0460.42Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    A  S    + L+ P+++A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVV
XP_030930209.1 chromatin remodeling protein EBS-like [Quercus lobata]6.0e-0460Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  + P+V+A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
TrEMBL top hitse value%identityAlignment
A0A068UUN1 Uncharacterized protein6.5e-0495.83Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSS
        HPSCMGMTIEEAKKLDHFLCSD S
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSS
A0A5A7UF44 Protein mlo2-like isoform X26.5e-0478.12Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDS
        HPSCMGMTIEEAKKLDHFLCSD S    A+ S
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDS
A0A5D3C9X7 Chromatin remodeling protein EBS-like isoform X13.8e-0451.79Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ
        HPSCMGMTIEEAKKLDHFLCSD S    A  S       + P+ +A V++  ++ Q
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ
A0A6A6KVU1 PHD-type domain-containing protein5.0e-0460Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    + D A   L+   + P+V+A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
B9SH49 Phd finger transcription factor, putative5.0e-0460Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
        HPSCMGMTIEEAKKLDHFLCSD S    + D A   L+   + P+V+A V
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV
SwissProt top hitse value%identityAlignment
F4JL28 Chromatin remodeling protein EBS1.6e-0475Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSS
        HP+C+GMTIEEAKKLDHF+C++ S
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSS
Arabidopsis top hitse value%identityAlignment
AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein6.4e-0461.54Show/hide
Query:  KVHPSCMGMTIEEAKKLDHFLCSDSS
        +VH +C+G+TIEEAKKL+HF+C + S
Subjt:  KVHPSCMGMTIEEAKKLDHFLCSDSS
AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.2e-0575Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSS
        HP+C+GMTIEEAKKLDHF+C++ S
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSS
AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.2e-0575Show/hide
Query:  HPSCMGMTIEEAKKLDHFLCSDSS
        HP+C+GMTIEEAKKLDHF+C++ S
Subjt:  HPSCMGMTIEEAKKLDHFLCSDSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGCAAAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTCGTCTGGTTTTGCTGCAGCACACGATTC
TGCTGGGGATCAACTGGATCTTCTGGACCCTGCGGTAGACGCGGTGGTTTATGAGTCTGGTGTTGCGATGCAGGAGGCGTTGGGAGAGACCATTACAACTGCATGTTCAT
TTAAGGACAAGGACACCAATTTTGCAATGCTCTCCTTGATTGTCGAGACATTAACAGCTTTAGCATTAAGAATGCTATTACAATGTTTTCTGCACCACCACCATCCAGCA
GCAGATCTCGTCGTCTCCGCTCAGCATCTCTGGTGGCGTCTTCGGTTGCAGCGACGTTCGGTTTTGGTAGTGACTAATTGTGGGTTTCAGGCAGCCAGCGGTAAAGCT
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGCAAAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTCGTCTGGTTTTGCTGCAGCACACGATTC
TGCTGGGGATCAACTGGATCTTCTGGACCCTGCGGTAGACGCGGTGGTTTATGAGTCTGGTGTTGCGATGCAGGAGGCGTTGGGAGAGACCATTACAACTGCATGTTCAT
TTAAGGACAAGGACACCAATTTTGCAATGCTCTCCTTGATTGTCGAGACATTAACAGCTTTAGCATTAAGAATGCTATTACAATGTTTTCTGCACCACCACCATCCAGCA
GCAGATCTCGTCGTCTCCGCTCAGCATCTCTGGTGGCGTCTTCGGTTGCAGCGACGTTCGGTTTTGGTAGTGACTAATTGTGGGTTTCAGGCAGCCAGCGGTAAAGCT
Protein sequenceShow/hide protein sequence
MFCKVHPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQEALGETITTACSFKDKDTNFAMLSLIVETLTALALRMLLQCFLHHHHPA
ADLVVSAQHLWWRLRLQRRSVLVVTNCGFQAASGKA