; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032950 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032950
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:13200848..13204634
RNA-Seq ExpressionSpg032950
SyntenySpg032950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]5.2e-2040.91Show/hide
Query:  WSQFCAKPDPVNSNIVREFYANADNAEEFQAI-----WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKII
        W QFC +PD     +VREFYAN     +  A      W+ S  E  +F+ + +K E   WL F+  RLL +TH S V++DR +LI+AI+   SIDVGK+I
Subjt:  WSQFCAKPDPVNSNIVREFYANADNAEEFQAI-----WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKII

Query:  SNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQ
        S+ I +  R K   + FP+ IT LC RAGV    ++ +   K  I M  L RL+
Subjt:  SNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-1932.28Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYAN----------------------------
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN                            
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYAN----------------------------

Query:  ----ADNAEEF-------------------QAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI
             D   EF                    A W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI
Subjt:  ----ADNAEEF-------------------QAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI

Query:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQRTQE
          C  +K G L+FP+ IT LCR A  P +  +  L + G ID   +AR+  TQE
Subjt:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-1928.7Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE----------------------
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN  + EE                      
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE----------------------

Query:  -----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI
                                       A W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI
Subjt:  -----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI

Query:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARL------QRTQEARQGGLVCGIH-----QILEQL-ALRTILLQQSLVLQNAQ
          C  +K G L+FP+ IT LCR A  P +  +  L + G ID   +AR+      + TQ+                 IL+QL AL   L QQ +   +  
Subjt:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARL------QRTQEARQGGLVCGIH-----QILEQL-ALRTILLQQSLVLQNAQ

Query:  NILLSDLREQNLCWSKAGSKTATSQLVSQFN
        ++L    ++Q   W+ +  +    +   Q N
Subjt:  NILLSDLREQNLCWSKAGSKTATSQLVSQFN

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.0e-1626.47Show/hide
Query:  IRFVNELARAKYRE-------MLKRDFLFERGFGDDLPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE-----------------------
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  FCA P+     +VREFY N  N ++                       
Subjt:  IRFVNELARAKYRE-------MLKRDFLFERGFGDDLPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE-----------------------

Query:  ----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIF
                                      A W +S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIF

Query:  NCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKG
         C  +K G L+FP+ IT +CR    P +  +  L + G
Subjt:  NCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKG

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.8e-1732.89Show/hide
Query:  RTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILL---DK
        RT++A+ LK  AN W+ FI+  L PTTHDS++S ++++L++ ++   +I+VGK++   I  C +++ GKL+FP+ I  L  +AGVP   +D+++    +K
Subjt:  RTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILL---DK

Query:  GIIDMPNLARLQRTQEARQGGLVCGIHQILEQLALRTILLQQSLVLQNAQNI
          IDM  +++L+   E  +G  + G+ + +E+L  ++  +   L+ Q A+ +
Subjt:  GIIDMPNLARLQRTQEARQGGLVCGIHQILEQLALRTILLQQSLVLQNAQNI

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein2.5e-2040.91Show/hide
Query:  WSQFCAKPDPVNSNIVREFYANADNAEEFQAI-----WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKII
        W QFC +PD     +VREFYAN     +  A      W+ S  E  +F+ + +K E   WL F+  RLL +TH S V++DR +LI+AI+   SIDVGK+I
Subjt:  WSQFCAKPDPVNSNIVREFYANADNAEEFQAI-----WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKII

Query:  SNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQ
        S+ I +  R K   + FP+ IT LC RAGV    ++ +   K  I M  L RL+
Subjt:  SNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQ

A0A2P5AGA5 Uncharacterized protein (Fragment)5.6e-2032.28Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYAN----------------------------
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN                            
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYAN----------------------------

Query:  ----ADNAEEF-------------------QAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI
             D   EF                    A W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI
Subjt:  ----ADNAEEF-------------------QAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI

Query:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQRTQE
          C  +K G L+FP+ IT LCR A  P +  +  L + G ID   +AR+  TQE
Subjt:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)7.3e-2028.7Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE----------------------
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN  + EE                      
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGDD-------LPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE----------------------

Query:  -----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI
                                       A W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI
Subjt:  -----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI

Query:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARL------QRTQEARQGGLVCGIH-----QILEQL-ALRTILLQQSLVLQNAQ
          C  +K G L+FP+ IT LCR A  P +  +  L + G ID   +AR+      + TQ+                 IL+QL AL   L QQ +   +  
Subjt:  FNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARL------QRTQEARQGGLVCGIH-----QILEQL-ALRTILLQQSLVLQNAQ

Query:  NILLSDLREQNLCWSKAGSKTATSQLVSQFN
        ++L    ++Q   W+ +  +    +   Q N
Subjt:  NILLSDLREQNLCWSKAGSKTATSQLVSQFN

A0A2P5DAQ2 Uncharacterized protein9.8e-1726.47Show/hide
Query:  IRFVNELARAKYRE-------MLKRDFLFERGFGDDLPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE-----------------------
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  FCA P+     +VREFY N  N ++                       
Subjt:  IRFVNELARAKYRE-------MLKRDFLFERGFGDDLPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEE-----------------------

Query:  ----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIF
                                      A W +S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ----------------------------FQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIF

Query:  NCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKG
         C  +K G L+FP+ IT +CR    P +  +  L + G
Subjt:  NCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKG

A0A5D2B8V0 Uncharacterized protein1.3e-1630.57Show/hide
Query:  VNELARAKYREMLK-RDFLFERGFG---DDL---PHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEEFQAI----------------------
        ++E  + ++  + K +  + E+GFG   +DL   P  +R  I    W +FC      +  +VREFYA+    +  + I                      
Subjt:  VNELARAKYREMLK-RDFLFERGFG---DDL---PHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEEFQAI----------------------

Query:  ---WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIP
           W +      + Q  YLK  A  W  F++   +P +H ST+S + +LL++AIL   SI+VGKII  EI NC +KK    YFP+ IT LC +A V    
Subjt:  ---WRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIP

Query:  EDVILLDKGIIDMPNLARL-QRTQEARQG
               +G I   +L RL +R  E  QG
Subjt:  EDVILLDKGIIDMPNLARL-QRTQEARQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGACGAGAGCAAGAAAAGAGCGAGACAATGAGGAGGAGGAGGTGCCTGTTACCCCCGACGCACAGAAAGTGAAAGCAAAGAAAAAGAAAACGTCGGAGGAGAA
AGAAGCCAAAAGAAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAAGTGTACAGAAGGTAGTGGAAGATGTTGCTGCTGCGATAGTTGAAGAAGAAAATCCGAAGGAAC
CAGAAGGACAGAACACTGAGCCGATTAACCCGATACTTCCGGATACGGAGGGAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAACAGGTCGAGGATAGGACAGAG
GATGTTCAGGAAACAGGCAATGAGCAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGAACTAATACCCCATCACCACCGTCGACGGATTCTAAGAAAGAAAATGTAGAAAG
AGAGGAACAGGAAAAAAAGAAGGTTGAGGACAGAGCGAGAGAGGAAGCAGGAAAGAAAGCAGTGGAAAAAACTTTGACAAAGCATCAAGAAGAGAGAGACAAAGGAATTG
TTGAAGCATCGGATGAACCTATAGAGGAAACAGAAGAAGGACCATTCATCCGCTTCGTCAATGAACTTGCCCGAGCAAAATATCGGGAGATGTTAAAAAGGGATTTCTTA
TTCGAAAGAGGGTTTGGTGACGATCTGCCACATTTCTTAAGGGCAGGGATCGCAAATCACGGCTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAACATTGT
TCGAGAGTTTTATGCGAATGCTGATAATGCAGAGGAATTTCAGGCCATATGGAGGCTATCAAAGACGGAGAAGCGAACATTTCAAGCTGCCTATCTAAAGAGTGAAGCCA
ATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTCCCGACTACGCATGATTCAACAGTGTCTCGCGACCGAGTGCTTCTGATATTCGCTATTCTTCGATCCTTAAGTATT
GATGTTGGAAAAATCATTTCAAATGAAATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTATTTCCCGAACACAATCACTATGCTATGCAGAAGGGCAGGAGTGCC
CACGATTCCAGAGGATGTGATTTTGCTTGACAAGGGAATCATTGATATGCCTAATCTGGCTCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGACTAGTGTGTGGAA
TTCATCAAATCCTAGAGCAACTGGCACTAAGAACTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTG
TGCTGGAGCAAAGCTGGGAGTAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAACAAACTGAATTCTGTTAAGCTATTCTCAGATTTATGGAGCAAGGAGAGCCATCC
ACGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGACGAGAGCAAGAAAAGAGCGAGACAATGAGGAGGAGGAGGTGCCTGTTACCCCCGACGCACAGAAAGTGAAAGCAAAGAAAAAGAAAACGTCGGAGGAGAA
AGAAGCCAAAAGAAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAAGTGTACAGAAGGTAGTGGAAGATGTTGCTGCTGCGATAGTTGAAGAAGAAAATCCGAAGGAAC
CAGAAGGACAGAACACTGAGCCGATTAACCCGATACTTCCGGATACGGAGGGAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAACAGGTCGAGGATAGGACAGAG
GATGTTCAGGAAACAGGCAATGAGCAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGAACTAATACCCCATCACCACCGTCGACGGATTCTAAGAAAGAAAATGTAGAAAG
AGAGGAACAGGAAAAAAAGAAGGTTGAGGACAGAGCGAGAGAGGAAGCAGGAAAGAAAGCAGTGGAAAAAACTTTGACAAAGCATCAAGAAGAGAGAGACAAAGGAATTG
TTGAAGCATCGGATGAACCTATAGAGGAAACAGAAGAAGGACCATTCATCCGCTTCGTCAATGAACTTGCCCGAGCAAAATATCGGGAGATGTTAAAAAGGGATTTCTTA
TTCGAAAGAGGGTTTGGTGACGATCTGCCACATTTCTTAAGGGCAGGGATCGCAAATCACGGCTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAACATTGT
TCGAGAGTTTTATGCGAATGCTGATAATGCAGAGGAATTTCAGGCCATATGGAGGCTATCAAAGACGGAGAAGCGAACATTTCAAGCTGCCTATCTAAAGAGTGAAGCCA
ATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTCCCGACTACGCATGATTCAACAGTGTCTCGCGACCGAGTGCTTCTGATATTCGCTATTCTTCGATCCTTAAGTATT
GATGTTGGAAAAATCATTTCAAATGAAATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTATTTCCCGAACACAATCACTATGCTATGCAGAAGGGCAGGAGTGCC
CACGATTCCAGAGGATGTGATTTTGCTTGACAAGGGAATCATTGATATGCCTAATCTGGCTCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGACTAGTGTGTGGAA
TTCATCAAATCCTAGAGCAACTGGCACTAAGAACTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTG
TGCTGGAGCAAAGCTGGGAGTAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAACAAACTGAATTCTGTTAAGCTATTCTCAGATTTATGGAGCAAGGAGAGCCATCC
ACGTGTCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPDAQKVKAKKKKTSEEKEAKRRRRQQRAEDQESVQKVVEDVAAAIVEEENPKEPEGQNTEPINPILPDTEGVQEEHTEEVQEKQVEDRTE
DVQETGNEQRKAGRVKVVRTNTPSPPSTDSKKENVEREEQEKKKVEDRAREEAGKKAVEKTLTKHQEERDKGIVEASDEPIEETEEGPFIRFVNELARAKYREMLKRDFL
FERGFGDDLPHFLRAGIANHGWSQFCAKPDPVNSNIVREFYANADNAEEFQAIWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSI
DVGKIISNEIFNCWRKKVGKLYFPNTITMLCRRAGVPTIPEDVILLDKGIIDMPNLARLQRTQEARQGGLVCGIHQILEQLALRTILLQQSLVLQNAQNILLSDLREQNL
CWSKAGSKTATSQLVSQFNKLNSVKLFSDLWSKESHPRV