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Spg032957 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032957
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold11:15821704..15829245
RNA-Seq ExpressionSpg032957
SyntenySpg032957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046640.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-0875Show/hide
Query:  SKCVKETCQRILRSLPLGCTVRFPFAACESPWERSPYEGL
        SK VKE CQ ILRSLPLGCT+RF  +AC SPWER+PY GL
Subjt:  SKCVKETCQRILRSLPLGCTVRFPFAACESPWERSPYEGL
TrEMBL top hitse value%identityAlignment
A0A5A7TU33 Gag/pol protein4.3e-0875Show/hide
Query:  SKCVKETCQRILRSLPLGCTVRFPFAACESPWERSPYEGL
        SK VKE CQ ILRSLPLGCT+RF  +AC SPWER+PY GL
Subjt:  SKCVKETCQRILRSLPLGCTVRFPFAACESPWERSPYEGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTAAGGCTGGAGATCCATGCTTGGCCTCAAGGTGCCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTCAATAACAAGGTGAATGGGGAAAGTGTTCA
TAGTAAGTGCGTGAAGGAAACGTGTCAACGTATCCTGCGGTCTCTTCCATTAGGTTGCACCGTGAGATTCCCATTCGCTGCCTGTGAGTCGCCCTGGGAGCGATCACCCT
ACGAAGGGCTTGTGATGCGCAAATTGCTTACCGCAAGTGTACAGCTCCAAAATGCTCTGTTTTTCCTCTGTTGTCCTCACCGGAGCCTTGGAAGCGATTCGGGGCTTAAA
CTAGCGAAACCGAAGCGTAAAATGACCATTCTGCCCTTGGAGACGTCACAGAGTCGAGACCCTTCAACCCAGGCGTCGGGACGCTGCTCAAATAAGGAAAAAAGGCATTG
GCGCGCAGCTGAAGCGTGCGTGGATATCAAATCAAACAGCCGCATCAGCACTATCGACCTTCCAATTCAGATAGAAACATATGTGACAAAACTGGAGAAGCATGTAGAGC
AACAAGCACAACTGACCCAAGAGACAATCCTTACAACAGAAGTTCCCTTCGCTGCAAAGGTTGATGATGAAATTGTGTGTCCGTTGCCATCTACCAATCGATCATGTGAG
GTTAAAGAAGAGTCTAAACCAGATTGCAAGGAAATTCAGGGGGAAGATGAGTTGAGGTTCTCATATGGTTGTCCTCACCGAAGCCTTGGAAGCGATTCGGGGCTTAAACG
AGCGAAACCGGAGCGTAAAATGACCATTCTGCCCTTGGAGACGTCACAGCGTCGAGACCCTTCAACCCAGGAGTCGGGACGCTGCTCAAATAAGGAAAAAAGGCATTGGC
GCGCAACTGAAGCGGTAGCGTCGCGACGCTCTCGCCATAGCGTCGCGACGCTACGAGATCCGAAAAATTATTTCCTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTAAGGCTGGAGATCCATGCTTGGCCTCAAGGTGCCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTCAATAACAAGGTGAATGGGGAAAGTGTTCA
TAGTAAGTGCGTGAAGGAAACGTGTCAACGTATCCTGCGGTCTCTTCCATTAGGTTGCACCGTGAGATTCCCATTCGCTGCCTGTGAGTCGCCCTGGGAGCGATCACCCT
ACGAAGGGCTTGTGATGCGCAAATTGCTTACCGCAAGTGTACAGCTCCAAAATGCTCTGTTTTTCCTCTGTTGTCCTCACCGGAGCCTTGGAAGCGATTCGGGGCTTAAA
CTAGCGAAACCGAAGCGTAAAATGACCATTCTGCCCTTGGAGACGTCACAGAGTCGAGACCCTTCAACCCAGGCGTCGGGACGCTGCTCAAATAAGGAAAAAAGGCATTG
GCGCGCAGCTGAAGCGTGCGTGGATATCAAATCAAACAGCCGCATCAGCACTATCGACCTTCCAATTCAGATAGAAACATATGTGACAAAACTGGAGAAGCATGTAGAGC
AACAAGCACAACTGACCCAAGAGACAATCCTTACAACAGAAGTTCCCTTCGCTGCAAAGGTTGATGATGAAATTGTGTGTCCGTTGCCATCTACCAATCGATCATGTGAG
GTTAAAGAAGAGTCTAAACCAGATTGCAAGGAAATTCAGGGGGAAGATGAGTTGAGGTTCTCATATGGTTGTCCTCACCGAAGCCTTGGAAGCGATTCGGGGCTTAAACG
AGCGAAACCGGAGCGTAAAATGACCATTCTGCCCTTGGAGACGTCACAGCGTCGAGACCCTTCAACCCAGGAGTCGGGACGCTGCTCAAATAAGGAAAAAAGGCATTGGC
GCGCAACTGAAGCGGTAGCGTCGCGACGCTCTCGCCATAGCGTCGCGACGCTACGAGATCCGAAAAATTATTTCCTTACTTGA
Protein sequenceShow/hide protein sequence
MLSKAGDPCLASRCPGSVPLRMVFAWVNNKVNGESVHSKCVKETCQRILRSLPLGCTVRFPFAACESPWERSPYEGLVMRKLLTASVQLQNALFFLCCPHRSLGSDSGLK
LAKPKRKMTILPLETSQSRDPSTQASGRCSNKEKRHWRAAEACVDIKSNSRISTIDLPIQIETYVTKLEKHVEQQAQLTQETILTTEVPFAAKVDDEIVCPLPSTNRSCE
VKEESKPDCKEIQGEDELRFSYGCPHRSLGSDSGLKRAKPERKMTILPLETSQRRDPSTQESGRCSNKEKRHWRATEAVASRRSRHSVATLRDPKNYFLT