; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032964 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032964
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold11:13382289..13386420
RNA-Seq ExpressionSpg032964
SyntenySpg032964
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]1.7e-1858.25Show/hide
Query:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS
        PQQ  Q  PQ +  SSLE+++++YMA+ D  IQS   S+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE+ KAVTLRSGK +E        KEPS
Subjt:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS

Query:  KTQ
          Q
Subjt:  KTQ

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]9.7e-1958.25Show/hide
Query:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS
        PQQ+ Q  PQ +  SSLE+++++YMA+ D  IQS   S+R LE+Q+GQLAN LK RPQG LPSDTE+PRR+GKE+ KA+TLRSGK LE        KEPS
Subjt:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS

Query:  KTQ
          Q
Subjt:  KTQ

XP_030502440.1 uncharacterized protein LOC115717596 [Cannabis sativa]2.6e-1955.93Show/hide
Query:  GAGNITVQA-GIHSFPYWEIFYSEKSAAVLPQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRR
        GA +   QA G  SFP       E S    PQQ  Q  PQ +  SSLE+++++YMA+ DV IQS   S+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR
Subjt:  GAGNITVQA-GIHSFPYWEIFYSEKSAAVLPQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRR

Query:  EGKEYVKAVTLRSGKPLE
        +G+E+ KAVTLRSGK LE
Subjt:  EGKEYVKAVTLRSGKPLE

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]1.7e-1858.25Show/hide
Query:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS
        PQQ  Q  PQ +  SSLE+++++YMA+ D  IQS   S+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE+ KAVTLRSGK +E        KEPS
Subjt:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS

Query:  KTQ
          Q
Subjt:  KTQ

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.7e-1858.25Show/hide
Query:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS
        PQQ  Q  PQ +  SSLE+++++YMA+ D  IQS   S+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE+ KAVTLRSGK +E        KEPS
Subjt:  PQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEER------KEPS

Query:  KTQ
          Q
Subjt:  KTQ

TrEMBL top hitse value%identityAlignment
A0A5B6VWJ0 Retroelement pol polyprotein-like2.3e-1347.01Show/hide
Query:  YSEKSAAVLPQ--QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGK----
        Y++     LP   Q  Q L Q  + +SLE+++K YMA+ D  IQS   +++ LE QVGQLA EL+ R QG LPSDTE+PR  GKE+ KA+TLRS K    
Subjt:  YSEKSAAVLPQ--QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGK----

Query:  -PLEERKEPSKTQDIEK
          +E  KE +  QD E+
Subjt:  -PLEERKEPSKTQDIEK

A0A6J1DW02 uncharacterized protein LOC1110248974.1e-1552.54Show/hide
Query:  QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQDIEKN
        Q  Q  P QN+ S+LE M+KEYMARTD  IQS   SMR    Q+G LANELK RPQG  P  TE PRREGKE  KAVTLRSG   +    P  T D++  
Subjt:  QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQDIEKN

Query:  CDKNVVVEKELESGQVPE
          K  V  K  E+   PE
Subjt:  CDKNVVVEKELESGQVPE

A0A6J1DYG0 uncharacterized protein LOC1110257642.6e-1759.18Show/hide
Query:  QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQDIE
        Q  Q  P QN+ S+LE M+KEYMARTD  IQS   SMR  E Q+GQLANELK RPQG  P  TE P+REGKE  KAVTLRSG   +E   P  T D++
Subjt:  QNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQDIE

A0A6J1GJ68 uncharacterized protein LOC1114543442.4e-1556.82Show/hide
Query:  QQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQ
        Q  S +S+E++IKEYMA+ DV IQS Q S++ LE+QVGQLA EL+ RP GKLP+DTE P+REGKE  +A+ LRSGK +    E +  Q
Subjt:  QQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQ

A0A6J1H7K8 uncharacterized protein LOC1114611676.8e-1847.73Show/hide
Query:  EIFYSEKSAAVLPQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLE
        ++ Y  + A    +   QA  Q   E+SLE++IKEYMA+ DV IQS Q S+R LE+QVGQLANEL+ RP GKLPSDTE P+REG E  +A+ LRSGK + 
Subjt:  EIFYSEKSAAVLPQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEYVKAVTLRSGKPLE

Query:  ERKEPSK---------TQDIEKNCDKNVVVEK
         R+E  K         T D ++  ++ VV E+
Subjt:  ERKEPSK---------TQDIEKNCDKNVVVEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGCTGGAATTCACTCCTTCCCCTA
TTGGGAAATATTCTACAGTGAGAAGAGTGCAGCTGTATTGCCCCAGCAAAATAAACAGGCTTTGCCCCAACAAAATTCAGAAAGTTCTCTTGAGGCGATGATAAAAGAAT
ATATGGCTCGTACAGATGTCGCTATTCAAAGTAATCAAGATTCAATGAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAG
CTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGTACGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAGGAAAGAAAAGAGCCTAGTAAAACCCA
GGATATAGAAAAGAATTGTGATAAAAATGTTGTTGTTGAGAAAGAATTGGAGTCTGGTCAGGTTCCTGAGTTGACGAGGGAGCTTAAGGACGTGATCGAAGCTTTCGGGC
CTCGAGATTGGAGCCAAAAGGATAAAAGAGCAATTGCAATATTTGGGAAAATCCGAGAGCTAGCGTCGAGACGCTGCAATTGCAGTGACTTGACGATGCTTCGGCCCAAA
ACTGCGGATAGAAGGCACAACGTCGAGATGCTGTGCCTAGCCTCTCGACGCTGTCACGATGTTATAAATGTTATTTTTCCGCTACTAGCCTTGAATTCCTCTGTTTTGCC
TCTGTTTACGGCTCTAAGAAGTCCCAAAATTGGCTCCCCTAAGAACCTAGCCGAAAAGAACTATAAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGCTGGAATTCACTCCTTCCCCTA
TTGGGAAATATTCTACAGTGAGAAGAGTGCAGCTGTATTGCCCCAGCAAAATAAACAGGCTTTGCCCCAACAAAATTCAGAAAGTTCTCTTGAGGCGATGATAAAAGAAT
ATATGGCTCGTACAGATGTCGCTATTCAAAGTAATCAAGATTCAATGAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAG
CTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGTACGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAGGAAAGAAAAGAGCCTAGTAAAACCCA
GGATATAGAAAAGAATTGTGATAAAAATGTTGTTGTTGAGAAAGAATTGGAGTCTGGTCAGGTTCCTGAGTTGACGAGGGAGCTTAAGGACGTGATCGAAGCTTTCGGGC
CTCGAGATTGGAGCCAAAAGGATAAAAGAGCAATTGCAATATTTGGGAAAATCCGAGAGCTAGCGTCGAGACGCTGCAATTGCAGTGACTTGACGATGCTTCGGCCCAAA
ACTGCGGATAGAAGGCACAACGTCGAGATGCTGTGCCTAGCCTCTCGACGCTGTCACGATGTTATAAATGTTATTTTTCCGCTACTAGCCTTGAATTCCTCTGTTTTGCC
TCTGTTTACGGCTCTAAGAAGTCCCAAAATTGGCTCCCCTAAGAACCTAGCCGAAAAGAACTATAAATACTGA
Protein sequenceShow/hide protein sequence
MGESGQFADSIILPFQGQDRMGAGNITVQAGIHSFPYWEIFYSEKSAAVLPQQNKQALPQQNSESSLEAMIKEYMARTDVAIQSNQDSMRALELQVGQLANELKARPQGK
LPSDTEHPRREGKEYVKAVTLRSGKPLEERKEPSKTQDIEKNCDKNVVVEKELESGQVPELTRELKDVIEAFGPRDWSQKDKRAIAIFGKIRELASRRCNCSDLTMLRPK
TADRRHNVEMLCLASRRCHDVINVIFPLLALNSSVLPLFTALRSPKIGSPKNLAEKNYKY