CuGenDBv2

Gene ID	Spg032990
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transposase
Genome location	scaffold5:6308797..6312204
RNA-Seq Expression	Spg032990
Synteny	Spg032990
Gene Ontology terms	GO:0003824 - catalytic activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050643.1 transposase [Cucumis melo var. makuwa]

3.0e-43

52.87

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT M EL  VR+SG++  IQFN  GQP+G  +KKMQSYIG C R+ IPIT+  W+ VP ELKDKIY+ I  +F L +I +  IL+SAS+K+R FK+ L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEEL
         + YI  + ++ + ++ PPK Y  I Q DW++FV ARLS E++      R+RRSK LYNH +SRKGYAN+ +EL
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEEL

XP_022136076.1 uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]

2.7e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

XP_022136077.1 uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]

3.0e-43

50.26

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  + E+FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

XP_022136079.1 uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]

2.7e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

XP_022136080.1 uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]

2.7e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U441 Transposase

1.5e-43

52.87

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT M EL  VR+SG++  IQFN  GQP+G  +KKMQSYIG C R+ IPIT+  W+ VP ELKDKIY+ I  +F L +I +  IL+SAS+K+R FK+ L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEEL
         + YI  + ++ + ++ PPK Y  I Q DW++FV ARLS E++      R+RRSK LYNH +SRKGYAN+ +EL
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEEL

A0A6J1C2H7 uncharacterized protein LOC111007859 isoform X1

1.3e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

A0A6J1C2V2 uncharacterized protein LOC111007859 isoform X4

1.3e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

A0A6J1C398 uncharacterized protein LOC111007859 isoform X3

1.3e-44

49.74

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  ++++FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

A0A6J1C4J7 uncharacterized protein LOC111007859 isoform X2

1.5e-43

50.26

Show/hide

Query:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL
        RGPT MHEL  +R+ G+RK I++N +GQPIG+NAKKMQS+IG C R+ IP+T+  W+ VP ELKDKI+  + E+FVLD  ++  IL SAS+K+R FKS L
Subjt:  RGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKL

Query:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW
         R YI P  +   C++ PP+ Y  I Q  W++FV ARLS E++ +    ++ R+K LYNH +SRKGYAN+ +EL+  S      R+I W
Subjt:  ARDYIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTACAAAGAGAAATACAAGAGGACCAACAGTTATGCATGAATTGTTTCGTGTACGTTCATCGGGTGAACGTAAAGTCATACAATTTAATGCTAAAGGTCAACCTAT
TGGAGATAATGCAAAGAAGATGCAAAGTTATATAGGATCTTGTGCACGTAAGTACATACCTATTACATTTGAAGATTGGCGTCATGTTCCATGTGAGTTGAAGGATAAAA
TTTATGAAACAATCAAGGAAACTTTTGTCTTAGATAACATCACGAGACAAGATATCTTGGTTTCTGCATCTCAAAAATGGCGACAATTTAAATCGAAATTGGCACGAGAT
TATATTTATCCTAATATCGAGCGTCTAGCATGCATAAAGTGTCCACCCAAACATTATCAATTTATTCTACAAAATGATTGGGATGCTTTTGTTCGAGCTAGGTTGAGTGG
TGAGTTTAAGAGAGTACGTGAACAACCACGAAAACGAAGATCTAAAAATCTTTATAATCATTGTTTATCGCGTAAAGGATATGCAAATATGATTGAAGAGTTGAATAAAG
TTTCTCAACTGGCATCAGAGAAGAGATCCATTTCATGGCCAAATGAACATAATAGACATGTGATAGCTTTGGGAAAGTATGTCTTGTCGAGCTATGAACGTCTACTTGCT
GAAAAACTTCAATTGGAAGAAAGGTGTAATGGTTTAGAAGAGGAGAAACTTGCTCTCGAAGAAAAATTGAAGATGATGAAAGATCAACTAAATACAATGAAAACATTAAG
TTGA

mRNA sequence

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Protein sequence

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MSTKRNTRGPTVMHELFRVRSSGERKVIQFNAKGQPIGDNAKKMQSYIGSCARKYIPITFEDWRHVPCELKDKIYETIKETFVLDNITRQDILVSASQKWRQFKSKLARD
YIYPNIERLACIKCPPKHYQFILQNDWDAFVRARLSGEFKRVREQPRKRRSKNLYNHCLSRKGYANMIEELNKVSQLASEKRSISWPNEHNRHVIALGKYVLSSYERLLA
EKLQLEERCNGLEEEKLALEEKLKMMKDQLNTMKTLS

Spg032990 (gene) of Sponge gourd (cylindrica) v1 genome