CuGenDBv2

Gene ID	Spg033009
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin carboxyl-terminal hydrolase
Genome location	scaffold5:5704878..5709076
RNA-Seq Expression	Spg033009
Synteny	Spg033009
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016579 - protein deubiquitination (biological process) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596631.1 Ubiquitin carboxyl-terminal hydrolase 8, partial [Cucurbita argyrosperma subsp. sororia]

8.2e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

KAG7028168.1 Ubiquitin carboxyl-terminal hydrolase 8 [Cucurbita argyrosperma subsp. argyrosperma]

8.2e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

XP_022151375.1 ubiquitin carboxyl-terminal hydrolase 8-like [Momordica charantia]

1.1e-40

72.09

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR F L G   +L+ LK       RH +  ATSN+AGR F+AE+TLQDVF LQIRI VS ET+LLTVKINRKDN+ADFYKRASIIFNSNSELFHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLFTNNMNN LDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

XP_022931260.1 ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita moschata]

4.8e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

XP_023005698.1 ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita maxima]

4.8e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGU4 Ubiquitin carboxyl-terminal hydrolase

1.1e-35

66.67

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH + +ATSNY GR FR E+ LQ VFPLQIRILVS ET+LLTVKINRKDN A+FYKRAS+IFNSNSELFHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTN+LFTNN NNFLD S +Q VKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

A0A5A7TQX4 Ubiquitin carboxyl-terminal hydrolase

1.2e-34

63.97

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH + ++TSNY GR FR E+  Q VFPLQIRILVS ET+LLTVKINRKDN A+FYKRAS+IFNSNSELFHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEA--SISVSEQLE
        QTN+LFTNN NNFLD S +Q VKE    + V E L+
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEA--SISVSEQLE

A0A6J1DB01 Ubiquitin carboxyl-terminal hydrolase

5.2e-41

72.09

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR F L G   +L+ LK       RH +  ATSN+AGR F+AE+TLQDVF LQIRI VS ET+LLTVKINRKDN+ADFYKRASIIFNSNSELFHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLFTNNMNN LDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

A0A6J1EYY5 Ubiquitin carboxyl-terminal hydrolase

2.3e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

A0A6J1L2W6 Ubiquitin carboxyl-terminal hydrolase

2.3e-41

72.87

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Query:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG
        GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSG
Subjt:  GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSG

Query:  QTNQLFTNNMNNFLDDSPIQRVKEASISV
        QTNQLF NNMNNFLDDSP+QRVKE  + +
Subjt:  QTNQLFTNNMNNFLDDSPIQRVKEASISV

SwissProt top hits

e value

%identity

Alignment

O22207 Ubiquitin carboxyl-terminal hydrolase 5

2.6e-05

26.74

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Query:  ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISV
        E   +V+PL++++L+  ++    ++I++K+ + + ++RA  IF+ +SE   IWD+ G       N+++  LDD+ +Q  ++  + V
Subjt:  ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISV

Q9C585 Ubiquitin carboxyl-terminal hydrolase 8

8.6e-09

45.59

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Query:  DVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLD
        DV+P+Q+R+ V  ET+ L VKI +KDN  + ++RA  IF+ +SE   IWD SGQT   F ++++N  D
Subjt:  DVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLD

Arabidopsis top hits

e value

%identity

Alignment

AT2G40930.1 ubiquitin-specific protease 5

1.8e-06

26.74

Show/hide

Query:  ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISV
        E   +V+PL++++L+  ++    ++I++K+ + + ++RA  IF+ +SE   IWD+ G       N+++  LDD+ +Q  ++  + V
Subjt:  ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISV

Sequences

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CDS sequence

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ATGATTTCGAAACACAGCAGCCTTCGGGTCTTCTTCACGATTTCCGTTGGCCTCTTTTCTTCTCACTTTGTCACGGTCGCTGTCGCTTGTTGCAATTTCCGCCGGAAGTT
TCCTCCAAAATCTCCAGTCACCCACCGTTTTTCTGGTTCATCATGCTTGGGTGGGGAAGAAACCTCTGTGTTGTGTGGTTTGTTTCCTCAGCTTTATCATTTGTCTAAGA
AAAGGCTGTATTCAGTAGTCTCTGTTTTGCCCCTTGTTGATCAGGCCTTTTTGATATCCTTGGGTTTTCGTTGTTTGCTCACTGATCGAGAGGCGATCAAGGTCGTTAGC
CTTCTTTCTCTTATTGCCAATCAGGGTGCCTTTGTGTTCTCCTCTCTTTGGAAGGTTAAAATTCCTAAAAGATTGAAGTTCTTTGCCTGGCAAGTTTTGCACGGGCGAGC
TAATGCTCAAGATCGCATTCAAAGGACCCTTGGTGTTGCATTTTTGCGAGAAAGGAAGAATCTTGTAGCATACTTGGTTTTTTGCCATCTTGGGAGGGCATTTGACTTGA
AAGGAATAGTAGAATTTTTAGAGGGGTTGAAAGATTTGGTGAGGAACTTTGGGAGGCATTATGAAGTTAAAGCAACATCAAATTATGCTGGCCGACACTTCAGAGCTGAA
GAAACGTTGCAGGATGTTTTTCCTCTGCAAATTAGGATACTGGTATCATCGGAGACAAGTTTGTTAACTGTGAAGATAAACCGAAAGGATAACTTAGCTGACTTTTATAA
GAGAGCTTCCATTATTTTCAATTCTAACTCTGAACTGTTTCACATTTGGGACTTCTCAGGGCAAACAAATCAACTTTTCACAAATAATATGAACAATTTTCTTGATGATT
CTCCTATTCAACGAGTCAAAGAGGCAAGTATATCTGTATCCGAGCAATTGGAGCTGAATAGTTATTTCATTGTACTGCTGAATTCATTGACAAATGCCGTGCAAAACCTT
GCTACTAAATGA

mRNA sequence

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Protein sequence

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MISKHSSLRVFFTISVGLFSSHFVTVAVACCNFRRKFPPKSPVTHRFSGSSCLGGEETSVLCGLFPQLYHLSKKRLYSVVSVLPLVDQAFLISLGFRCLLTDREAIKVVS
LLSLIANQGAFVFSSLWKVKIPKRLKFFAWQVLHGRANAQDRIQRTLGVAFLRERKNLVAYLVFCHLGRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAE
ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISVSEQLELNSYFIVLLNSLTNAVQNL
ATK

Spg033009 (gene) of Sponge gourd (cylindrica) v1 genome