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Spg033030 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033030
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPAP_fibrillin domain-containing protein
Genome locationscaffold5:6923129..6926578
RNA-Seq ExpressionSpg033030
SyntenySpg033030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043730.1 putative plastid-lipid-associated protein 13 [Cucumis melo var. makuwa]2.6e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
XP_008443057.1 PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X1 [Cucumis melo]2.6e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
XP_008443058.1 PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Cucumis melo]2.6e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
XP_008443060.1 PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X4 [Cucumis melo]2.6e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
XP_011652092.1 probable plastid-lipid-associated protein 13, chloroplastic isoform X1 [Cucumis sativus]3.4e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRD SGVPEVLTRLDSPPSPLEPNTTDYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
TrEMBL top hitse value%identityAlignment
A0A1S3B757 probable plastid-lipid-associated protein 13, chloroplastic isoform X11.3e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
A0A1S3B780 probable plastid-lipid-associated protein 13, chloroplastic isoform X21.3e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
A0A1S3B7Y5 probable plastid-lipid-associated protein 13, chloroplastic isoform X41.3e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
A0A5A7TKF1 Putative plastid-lipid-associated protein 131.3e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
A0A5D3DPE3 Putative plastid-lipid-associated protein 131.3e-0785.71Show/hide
Query:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
        +  +IIRDTSGVPEVLTRLDSPPSPLEPNT+DYES
Subjt:  QNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTCTGCTAGCCACCTCAGCTTTGATCGTAGGTTTTAGTCCGTTTAGGAACGTGCTTTCCAGAACCGTCTCCGGCAACTCCGGTCTACAATTAAATCCTCTCGT
GCCATTGAAGGTTTTCAATATAGAGATTAGAGCCATTGATCTGCAAAATTGCATGATTATTAGAGATACTTCTGGTGTGCCTGAAGTTCTTACAAGGCTGGATTCTCCTC
CATCTCCCCTGGAGCCGAACACAACAGACTACGAAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTCTGCTAGCCACCTCAGCTTTGATCGTAGGTTTTAGTCCGTTTAGGAACGTGCTTTCCAGAACCGTCTCCGGCAACTCCGGTCTACAATTAAATCCTCTCGT
GCCATTGAAGGTTTTCAATATAGAGATTAGAGCCATTGATCTGCAAAATTGCATGATTATTAGAGATACTTCTGGTGTGCCTGAAGTTCTTACAAGGCTGGATTCTCCTC
CATCTCCCCTGGAGCCGAACACAACAGACTACGAAAGCTAG
Protein sequenceShow/hide protein sequence
MGCLLATSALIVGFSPFRNVLSRTVSGNSGLQLNPLVPLKVFNIEIRAIDLQNCMIIRDTSGVPEVLTRLDSPPSPLEPNTTDYES