; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033033 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033033
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVQ domain-containing protein
Genome locationscaffold5:5933551..5933895
RNA-Seq ExpressionSpg033033
SyntenySpg033033
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]1.5e-3979.82Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR
        MN TAARN+ QLRGPRPPPLT+NKSS  IFKKS   TKN    PN+R+RRSP+I+YLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVA+S SA+GMITD 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR

Query:  PGEEFVSACNCIPS
         GEEF SACNCIPS
Subjt:  PGEEFVSACNCIPS

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3883.62Show/hide
Query:  MNSTAARNR--LQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMIT
        MNS AARN+  L+LRGPRPPPLT+NKSS KIFKKSTTT  NL PIPNRRD   PVIVYLRSPKIIHVRPEEFKSFVQRLTGN SSVAVVAASFSATGMI 
Subjt:  MNSTAARNR--LQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMIT

Query:  DRPGEEFVSACNCIPS
        D PGE  VSACN IPS
Subjt:  DRPGEEFVSACNCIPS

KAG6690545.1 hypothetical protein I3842_10G021000 [Carya illinoinensis]6.5e-1450Show/hide
Query:  RLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDRPGEE
        R QL+GPRP P+T++KSS+KI K          P P+R+  RSPVI+YL+SPK+IHVRPEEF   VQRLTGN++     A+S+S +      P +E
Subjt:  RLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDRPGEE

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]6.7e-3575.65Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNK-SSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITD
        + S AARN  QLRGPRPPPLT+NK SS  I KKS  T  N LPI N+R RRSP+I+YLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVA+S SATGMI D
Subjt:  MNSTAARNRLQLRGPRPPPLTLNK-SSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITD

Query:  RPGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  RPGEEFVSACNCIPS

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]1.5e-3979.82Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR
        MN TAARN+ QLRGPRPPPLT+NKSS  IFKKS   TKN    PN+R+RRSP+I+YLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVA+S SA+GMITD 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR

Query:  PGEEFVSACNCIPS
         GEEF SACNCIPS
Subjt:  PGEEFVSACNCIPS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein3.2e-3575.65Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNK-SSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITD
        + S AARN  QLRGPRPPPLT+NK SS  I KKS  T  N LPI N+R RRSP+I+YLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVA+S SATGMI D
Subjt:  MNSTAARNRLQLRGPRPPPLTLNK-SSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITD

Query:  RPGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  RPGEEFVSACNCIPS

A0A1R3JJT0 VQ motif-containing protein1.2e-1352.33Show/hide
Query:  TAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAA
        +++R   +L+GPRP PL ++ +S KI KKS+TT+    P  NR     PV++YLRSPKIIHVRPEEF S VQRLTG  S+ A  ++
Subjt:  TAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAA

A0A1S3B975 protein MKS1-like7.5e-4079.82Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR
        MN TAARN+ QLRGPRPPPLT+NKSS  IFKKS   TKN    PN+R+RRSP+I+YLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVA+S SA+GMITD 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR

Query:  PGEEFVSACNCIPS
         GEEF SACNCIPS
Subjt:  PGEEFVSACNCIPS

A0A2N9GB07 VQ domain-containing protein6.4e-1555.43Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFS
        M+S   +  LQL+GPRP PLT+NKSS KI K+         P+PN R R SPVI+YL+SPK+IHVRPEEF   VQ+LTGN++   V A S S
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFS

A0A5D3DP92 Protein MKS1-like7.5e-4079.82Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR
        MN TAARN+ QLRGPRPPPLT+NKSS  IFKKS   TKN    PN+R+RRSP+I+YLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVA+S SA+GMITD 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDR

Query:  PGEEFVSACNCIPS
         GEEF SACNCIPS
Subjt:  PGEEFVSACNCIPS

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B8.9e-0633.98Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF
        M++ + R+R  + GP+P PL +   S KI KK      +  P P           R    PV +Y  +P+IIH  P  F + VQRLTG  S+    ++S 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF

Query:  SAT
        S+T
Subjt:  SAT

Q8LGD5 Protein MKS13.3e-0837.5Show/hide
Query:  RNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRD-----RRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAV---------VAASFS
        + +LQ+ GPRP PL+++K S KI K      K+  P PNR        R PV++Y  SPK++H    EF + VQRLTG  S V +          AA  +
Subjt:  RNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRD-----RRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAV---------VAASFS

Query:  ATGMITDRPGEE
        +T   + R G+E
Subjt:  ATGMITDRPGEE

Q9CA36 VQ motif-containing protein 8, chloroplastic2.3e-0644.93Show/hide
Query:  QLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        ++ G RP  L L   S  I K S+  +K     P    R SPVI+Y  SPK+IH R E+F + VQRLTG
Subjt:  QLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG

Q9LS54 VQ motif-containing protein 201.7e-0440Show/hide
Query:  PRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L +NK S  I K  + ++ +    P     R PVI+Y  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding6.3e-0733.98Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF
        M++ + R+R  + GP+P PL +   S KI KK      +  P P           R    PV +Y  +P+IIH  P  F + VQRLTG  S+    ++S 
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF

Query:  SAT
        S+T
Subjt:  SAT

AT1G21326.1 VQ motif-containing protein9.7e-0835.92Show/hide
Query:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF
        M++ + R+R  + GPRP PL +   S KI KK      +  P P           R    PVI+Y  SP+IIH  P  F + VQRLTG ++S +  ++S+
Subjt:  MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIP---------NRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASF

Query:  SAT
        S++
Subjt:  SAT

AT1G68450.1 VQ motif-containing protein1.7e-0744.93Show/hide
Query:  QLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        ++ G RP  L L   S  I K S+  +K     P    R SPVI+Y  SPK+IH R E+F + VQRLTG
Subjt:  QLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18360.1 VQ motif-containing protein1.2e-0540Show/hide
Query:  PRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L +NK S  I K  + ++ +    P     R PVI+Y  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18690.1 MAP kinase substrate 12.3e-0937.5Show/hide
Query:  RNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRD-----RRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAV---------VAASFS
        + +LQ+ GPRP PL+++K S KI K      K+  P PNR        R PV++Y  SPK++H    EF + VQRLTG  S V +          AA  +
Subjt:  RNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRD-----RRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAV---------VAASFS

Query:  ATGMITDRPGEE
        +T   + R G+E
Subjt:  ATGMITDRPGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGCCGCGAGGAATCGATTGCAATTGCGAGGTCCGAGGCCGCCGCCATTGACGCTGAACAAATCCTCTGTTAAGATTTTCAAGAAATCGACGACGACGAC
GAAAAATCTGCTTCCGATTCCGAACCGACGCGATCGCCGTTCTCCGGTGATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCG
TTCAACGCCTCACCGGAAACCGATCCTCCGTCGCCGTCGTTGCGGCGTCCTTCTCTGCTACTGGAATGATTACGGATCGTCCTGGTGAGGAATTTGTGTCCGCCTGCAAT
TGCATTCCGTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACCGCCGCGAGGAATCGATTGCAATTGCGAGGTCCGAGGCCGCCGCCATTGACGCTGAACAAATCCTCTGTTAAGATTTTCAAGAAATCGACGACGACGAC
GAAAAATCTGCTTCCGATTCCGAACCGACGCGATCGCCGTTCTCCGGTGATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCG
TTCAACGCCTCACCGGAAACCGATCCTCCGTCGCCGTCGTTGCGGCGTCCTTCTCTGCTACTGGAATGATTACGGATCGTCCTGGTGAGGAATTTGTGTCCGCCTGCAAT
TGCATTCCGTCGTAG
Protein sequenceShow/hide protein sequence
MNSTAARNRLQLRGPRPPPLTLNKSSVKIFKKSTTTTKNLLPIPNRRDRRSPVIVYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVAASFSATGMITDRPGEEFVSACN
CIPS