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Spg033060 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033060
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:6579527..6581640
RNA-Seq ExpressionSpg033060
SyntenySpg033060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAQ19327.1 bZIP-like protein [Oryza sativa Japonica Group]2.0e-0538.75Show/hide
Query:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES
        DAEVI+N    +R+  D I W+    G+FSV+ AY LA  +++ +E+  SG +     W+ IWK K   K KI    V S
Subjt:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES

EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica Group]2.0e-0538.75Show/hide
Query:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES
        DAEVI+N    +R+  D I W+    G+FSV+ AY LA  +++ +E+  SG +     W+ IWK K   K KI    V S
Subjt:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]4.1e-0655.1Show/hide
Query:  SYASWSEKEGKGRIRWTIRDSNGSLIGTRCARIYKKWLIKCLEAKAILE
        SYASWSE+ GKG + W I DS GS I   C  + +KWL+K LE KA++E
Subjt:  SYASWSEKEGKGRIRWTIRDSNGSLIGTRCARIYKKWLIKCLEAKAILE

XP_015388522.1 uncharacterized protein LOC107178170 [Citrus sinensis]1.6e-0533.04Show/hide
Query:  ESGKTISLERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKI----TVANVEST
        ESG+ IS       +D E I+  P       DE++W+ H +G +SVK  Y LA N+    E   S +S S+  WK +W  +   K KI       N+  T
Subjt:  ESGKTISLERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKI----TVANVEST

Query:  KRILWSYASWSE
           LW   S  E
Subjt:  KRILWSYASWSE

XP_025877668.1 uncharacterized protein LOC4351546 [Oryza sativa Japonica Group]2.0e-0538.75Show/hide
Query:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES
        DAEVI+N    +R+  D I W+    G+FSV+ AY LA  +++ +E+  SG +     W+ IWK K   K KI    V S
Subjt:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES

TrEMBL top hitse value%identityAlignment
A0A2N9FB16 CCHC-type domain-containing protein7.6e-0637.65Show/hide
Query:  LERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRS--GNSQSKAMWKTIWKAKCYPKAKITV
        L+RF   +D E I + P  +R   D +IW+   +GVFSV+ AYH+  N     E + S    SQ K  W  IW A   PK K+ +
Subjt:  LERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRS--GNSQSKAMWKTIWKAKCYPKAKITV

A0A2N9GJ35 Uncharacterized protein7.6e-0637.65Show/hide
Query:  LERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRS--GNSQSKAMWKTIWKAKCYPKAKITV
        L+RF   +D E I + P  +R   D +IW+   +GVFSV+ AYH+  N     E + S    SQ K  W  IW A   PK K+ +
Subjt:  LERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRS--GNSQSKAMWKTIWKAKCYPKAKITV

A0A2N9I509 Uncharacterized protein5.8e-0635.8Show/hide
Query:  FSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDE-TLRSGNSQSKAMWKTIWKAKCYPKAKITV
        F PR DAE+I   P  +R  +D +IW     GVFSV+ AYH+  +  ++DE ++ S  S     W ++W  +  PK K+ +
Subjt:  FSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDE-TLRSGNSQSKAMWKTIWKAKCYPKAKITV

B8BN96 Reverse transcriptase domain-containing protein9.9e-0638.75Show/hide
Query:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES
        DAEVI+N    +R+  D I W+    G+FSV+ AY LA  +++ +E+  SG +     W+ IWK K   K KI    V S
Subjt:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES

Q0IPZ9 Os12g0156200 protein9.9e-0638.75Show/hide
Query:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES
        DAEVI+N    +R+  D I W+    G+FSV+ AY LA  +++ +E+  SG +     W+ IWK K   K KI    V S
Subjt:  DAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTGGAAAGACGATATCATTAGAGAGATTTTCCCCTCGAAAAGATGCAGAGGTGATTATGAATACTCCTAGAATCAATAGAACCACTAACGATGAGATAATATG
GAACCAACATTCAAAAGGAGTTTTTTCGGTGAAGTGTGCTTATCATTTGGCTAGGAATGTGATTTCAAAGGATGAGACTTTGAGATCAGGAAATTCTCAATCAAAAGCTA
TGTGGAAAACAATTTGGAAAGCTAAATGCTATCCTAAAGCTAAAATCACAGTGGCAAATGTGGAATCAACAAAACGCATATTATGGAGTTACGCCTCGTGGAGTGAGAAA
GAGGGGAAAGGTAGAATAAGATGGACCATTCGTGACTCTAATGGCTCTTTGATCGGGACCAGATGTGCAAGAATCTACAAGAAATGGCTAATTAAATGCCTAGAAGCCAA
AGCAATTTTAGAAGATTGGAATCTTACTTTTCATACGACGATTTCGGGGGAAGTAGATTCTAACGATGATCTTGAGGATCAGTTGGAGCTGTCTTTGTTAATTAGAGAGA
TCAAGAGGACGAACGAGGCAACGCAAGTCGAGATGAAGCGGTTTGGAGGGAAAGATTTTTCTCCGATTGGTTGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTGGAAAGACGATATCATTAGAGAGATTTTCCCCTCGAAAAGATGCAGAGGTGATTATGAATACTCCTAGAATCAATAGAACCACTAACGATGAGATAATATG
GAACCAACATTCAAAAGGAGTTTTTTCGGTGAAGTGTGCTTATCATTTGGCTAGGAATGTGATTTCAAAGGATGAGACTTTGAGATCAGGAAATTCTCAATCAAAAGCTA
TGTGGAAAACAATTTGGAAAGCTAAATGCTATCCTAAAGCTAAAATCACAGTGGCAAATGTGGAATCAACAAAACGCATATTATGGAGTTACGCCTCGTGGAGTGAGAAA
GAGGGGAAAGGTAGAATAAGATGGACCATTCGTGACTCTAATGGCTCTTTGATCGGGACCAGATGTGCAAGAATCTACAAGAAATGGCTAATTAAATGCCTAGAAGCCAA
AGCAATTTTAGAAGATTGGAATCTTACTTTTCATACGACGATTTCGGGGGAAGTAGATTCTAACGATGATCTTGAGGATCAGTTGGAGCTGTCTTTGTTAATTAGAGAGA
TCAAGAGGACGAACGAGGCAACGCAAGTCGAGATGAAGCGGTTTGGAGGGAAAGATTTTTCTCCGATTGGTTGTCTTTGA
Protein sequenceShow/hide protein sequence
MESGKTISLERFSPRKDAEVIMNTPRINRTTNDEIIWNQHSKGVFSVKCAYHLARNVISKDETLRSGNSQSKAMWKTIWKAKCYPKAKITVANVESTKRILWSYASWSEK
EGKGRIRWTIRDSNGSLIGTRCARIYKKWLIKCLEAKAILEDWNLTFHTTISGEVDSNDDLEDQLELSLLIREIKRTNEATQVEMKRFGGKDFSPIGCL