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Spg033116 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033116
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransducin family protein / WD-40 repeat family protein, putative isoform 3
Genome locationscaffold5:992255..995011
RNA-Seq ExpressionSpg033116
SyntenySpg033116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK24953.1 avirulence-responsive protein [Cucumis melo var. makuwa]6.2e-1858.95Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSIENRQDTCME
        MYVGDE GL+SV+KFD EDEKL+ LPY ISA +I                          SDVAGFPFPDDQPSP+IGVLQH SSI NRQDTC E
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSIENRQDTCME

XP_022145606.1 uncharacterized protein LOC111015012 [Momordica charantia]2.6e-1661.63Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSI
        MY+GDEYGL+SVIKFDAEDEKLL LPY ISAT+I                          SDVAGFPFPDDQ SPVIGVL HSSSI
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSI

XP_022934514.1 uncharacterized protein LOC111441669 isoform X1 [Cucurbita moschata]9.9e-1663.1Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSVIKFDAEDEKLLQLPYL+SAT+I                          SDVAGFPFPD Q SPVIGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

XP_022934515.1 uncharacterized protein LOC111441669 isoform X2 [Cucurbita moschata]9.9e-1663.1Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSVIKFDAEDEKLLQLPYL+SAT+I                          SDVAGFPFPD Q SPVIGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

XP_022934516.1 uncharacterized protein LOC111441669 isoform X3 [Cucurbita moschata]9.9e-1663.1Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSVIKFDAEDEKLLQLPYL+SAT+I                          SDVAGFPFPD Q SPVIGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

TrEMBL top hitse value%identityAlignment
A0A0A0LA66 V-SNARE coiled-coil homology domain-containing protein5.3e-2369.05Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSV+KFD EDEKL+ LPY ISAT+I GN+CCFIQL+TL+    +    N   +VAGF FPDDQPSP+IGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

A0A5D3DMU2 Avirulence-responsive protein3.0e-1858.95Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSIENRQDTCME
        MYVGDE GL+SV+KFD EDEKL+ LPY ISA +I                          SDVAGFPFPDDQPSP+IGVLQH SSI NRQDTC E
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSIENRQDTCME

A0A6J1CWT3 uncharacterized protein LOC1110150121.3e-1661.63Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSI
        MY+GDEYGL+SVIKFDAEDEKLL LPY ISAT+I                          SDVAGFPFPDDQ SPVIGVL HSSSI
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSI

A0A6J1F2T9 uncharacterized protein LOC111441669 isoform X14.8e-1663.1Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSVIKFDAEDEKLLQLPYL+SAT+I                          SDVAGFPFPD Q SPVIGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

A0A6J1F7X5 uncharacterized protein LOC111441669 isoform X24.8e-1663.1Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS
        MYVGDE GLLSVIKFDAEDEKLLQLPYL+SAT+I                          SDVAGFPFPD Q SPVIGVLQHSS
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05570.1 transducin family protein / WD-40 repeat family protein2.2e-0562.07Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLI
        MYVGDEYG++SV+ + A++ KLLQLPY +
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLI

AT5G05570.2 transducin family protein / WD-40 repeat family protein2.2e-0562.07Show/hide
Query:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLI
        MYVGDEYG++SV+ + A++ KLLQLPY +
Subjt:  MYVGDEYGLLSVIKFDAEDEKLLQLPYLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTCGGGGATGAGTATGGTTTATTGTCAGTTATCAAGTTTGATGCTGAAGATGAAAAACTTCTGCAGTTGCCATACCTTATTTCTGCAACTAATATCAATGGTAA
TATCTGCTGTTTCATTCAGTTGGAGACATTATTGTCTAGTTCATTGAATTGCATGATGTATAATTCTGCTTCTGATGTTGCAGGATTTCCATTCCCCGATGATCAGCCCT
CGCCTGTCATTGGAGTTCTTCAGCATTCTTCTTCTATTGAGAATAGGCAAGATACTTGCATGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGTCGGGGATGAGTATGGTTTATTGTCAGTTATCAAGTTTGATGCTGAAGATGAAAAACTTCTGCAGTTGCCATACCTTATTTCTGCAACTAATATCAATGGTAA
TATCTGCTGTTTCATTCAGTTGGAGACATTATTGTCTAGTTCATTGAATTGCATGATGTATAATTCTGCTTCTGATGTTGCAGGATTTCCATTCCCCGATGATCAGCCCT
CGCCTGTCATTGGAGTTCTTCAGCATTCTTCTTCTATTGAGAATAGGCAAGATACTTGCATGGAATGA
Protein sequenceShow/hide protein sequence
MYVGDEYGLLSVIKFDAEDEKLLQLPYLISATNINGNICCFIQLETLLSSSLNCMMYNSASDVAGFPFPDDQPSPVIGVLQHSSSIENRQDTCME